Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829530.1:5834459-5839912[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.12 8.6 7.8 0.9 1 20 69 88 69 90 0.94

2 31 6.9 4.8e+02 2.3 0.1 3 23 119 139 118 139 0.94

3 31 0.016 1.1 10.6 1.4 2 23 162 183 161 183 0.97

4 31 0.028 1.9 9.8 0.1 1 23 187 209 187 209 0.95

5 31 1.3 93 4.5 1.7 1 21 214 234 214 237 0.78

6 31 0.035 2.4 9.5 0.3 1 23 243 266 243 266 0.95

7 31 0.00049 0.034 15.3 1.0 1 23 273 296 273 296 0.98

8 31 0.00013 0.0089 17.2 0.6 3 23 305 325 303 325 0.97

9 31 1.1e-05 0.00078 20.5 2.9 1 23 331 353 331 353 0.98

10 31 0.0024 0.17 13.1 0.2 2 23 357 379 356 379 0.95

11 31 0.005 0.35 12.1 0.3 1 23 460 483 460 483 0.97

12 31 0.56 39 5.7 0.3 2 23 510 532 509 532 0.92

13 31 2.4 1.7e+02 3.7 3.5 1 23 554 576 554 576 0.96

14 31 0.00086 0.06 14.5 1.3 1 23 580 602 580 602 0.96

15 31 0.0059 0.41 11.9 0.2 1 21 636 656 636 659 0.90

16 31 0.034 2.3 9.5 0.9 1 21 666 686 666 687 0.89

17 31 0.49 34 5.9 0.1 1 23 736 758 736 758 0.96

18 31 0.0056 0.39 12.0 2.1 2 23 784 806 783 806 0.92

19 31 0.058 4 8.8 1.4 1 23 828 850 828 850 0.99

20 31 0.0018 0.13 13.5 5.3 1 21 854 874 854 876 0.95

21 31 0.15 10 7.5 0.1 1 23 881 904 881 904 0.91

22 31 0.014 0.95 10.8 3.8 1 23 910 933 910 933 0.96

23 31 0.3 21 6.5 0.1 1 23 989 1011 989 1011 0.94

24 31 0.047 3.3 9.1 6.9 1 23 1079 1101 1079 1101 0.95

25 31 0.015 1.1 10.6 0.2 3 23 1107 1127 1106 1127 0.95

26 31 0.0088 0.61 11.4 0.8 1 23 1135 1158 1135 1158 0.95

27 31 0.097 6.7 8.1 0.6 1 23 1164 1187 1164 1187 0.97

28 31 0.14 9.6 7.6 3.3 1 23 1193 1216 1193 1216 0.96

29 31 0.00046 0.032 15.4 0.2 1 23 1222 1244 1222 1244 0.96

30 31 5.8e-06 0.00041 21.4 1.9 1 23 1250 1272 1250 1272 0.99

31 31 0.0014 0.097 13.9 4.8 1 23 1278 1300 1278 1301 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.12	8.6	7.8	0.9	1	20	69	88	69	90	0.94
2	31	6.9	4.8e+02	2.3	0.1	3	23	119	139	118	139	0.94
3	31	0.016	1.1	10.6	1.4	2	23	162	183	161	183	0.97
4	31	0.028	1.9	9.8	0.1	1	23	187	209	187	209	0.95
5	31	1.3	93	4.5	1.7	1	21	214	234	214	237	0.78
6	31	0.035	2.4	9.5	0.3	1	23	243	266	243	266	0.95
7	31	0.00049	0.034	15.3	1.0	1	23	273	296	273	296	0.98
8	31	0.00013	0.0089	17.2	0.6	3	23	305	325	303	325	0.97
9	31	1.1e-05	0.00078	20.5	2.9	1	23	331	353	331	353	0.98
10	31	0.0024	0.17	13.1	0.2	2	23	357	379	356	379	0.95
11	31	0.005	0.35	12.1	0.3	1	23	460	483	460	483	0.97
12	31	0.56	39	5.7	0.3	2	23	510	532	509	532	0.92
13	31	2.4	1.7e+02	3.7	3.5	1	23	554	576	554	576	0.96
14	31	0.00086	0.06	14.5	1.3	1	23	580	602	580	602	0.96
15	31	0.0059	0.41	11.9	0.2	1	21	636	656	636	659	0.90
16	31	0.034	2.3	9.5	0.9	1	21	666	686	666	687	0.89
17	31	0.49	34	5.9	0.1	1	23	736	758	736	758	0.96
18	31	0.0056	0.39	12.0	2.1	2	23	784	806	783	806	0.92
19	31	0.058	4	8.8	1.4	1	23	828	850	828	850	0.99
20	31	0.0018	0.13	13.5	5.3	1	21	854	874	854	876	0.95
21	31	0.15	10	7.5	0.1	1	23	881	904	881	904	0.91
22	31	0.014	0.95	10.8	3.8	1	23	910	933	910	933	0.96
23	31	0.3	21	6.5	0.1	1	23	989	1011	989	1011	0.94
24	31	0.047	3.3	9.1	6.9	1	23	1079	1101	1079	1101	0.95
25	31	0.015	1.1	10.6	0.2	3	23	1107	1127	1106	1127	0.95
26	31	0.0088	0.61	11.4	0.8	1	23	1135	1158	1135	1158	0.95
27	31	0.097	6.7	8.1	0.6	1	23	1164	1187	1164	1187	0.97
28	31	0.14	9.6	7.6	3.3	1	23	1193	1216	1193	1216	0.96
29	31	0.00046	0.032	15.4	0.2	1	23	1222	1244	1222	1244	0.96
30	31	5.8e-06	0.00041	21.4	1.9	1	23	1250	1272	1250	1272	0.99
31	31	0.0014	0.097	13.9	4.8	1	23	1278	1300	1278	1301	0.96

Sequence Information

Coding Sequence: ATGTCTGAACCTGgaCGCAGCCAAACCGAACACGAAACTGTGATAAAGGTAGAGCCTACCGATGTACCAATAGAGCATTTGCTCAGGGGAAAGCCGAAGTACCAGAGGAGCGCCCGAGCGGAGGCTCGGCTCGCGACCAAGAAAAACGCGACTGCCATACTTGAATGCTGGTCCGTCGTACCCTTTAGATGGAAGAGAAACCAGTTCAAATGCGCCTTCTGCGAAGCCAAATTCACAGACTGCAACCTCTTGAGGCTCCACGTAGGGACTTGCTCCGCGCAACACAGCGTCAAAGACATTTACAGCAAATTCAAAGAAATGTCCCTCATCAATATCGACGTGACCGATGCTCTTTGCCGTCTCTGCTCGTTGCCGTACACAGATGTGAAACAGATGCGAGAACATGTCATCGACCACGGATACAACTTTGAAACAAAACAACCGGACGGCGTTCTCCCATTCTGCCTCGACAAGGAATCGTGGAGATGCGTGATATGCCACGAAAAGTTCAATAATTTTCTTAAACTCTATGAACACATGAATGTGCATTACCAGCATTATATTTGTGCCACGTGCGGTAAGGGTTACATGACGGCGCCTAGGTTAAGAAAGCACTCGGAAGTGCATATAAGCGGGTTGTTCCCATGCAATGAATGTGTCCGGACGTTCAAAATGCGTGCTGCTAGGGACCACCACAAAGCGCATGCCCATGCCAAAGCGCCTAGATATGAATGCCCCCAATGCAACATGCGATTCGATGGATACTACGATCGCATGAACCACCTGAACGAGGCTCATAGAGAAAAAGAAGTGTCGTACAGCTGCCCGCATTGCGAACTTACATTCAAGACGTCAGGGAAGCGAGCAATTCACGTCCGCACAGTCCATTTCCCGCCTCAACGCGATTATGGATGTAGTTTCTGCGAATGGAATTTTAAAACAGCATACGAACTCAAGAGGCACATGGTGAAACATACCGGAGAGAGAAACTTTCACTGCAATGTTTGCGAAAAATCGTTCCCAAGGAATAGGGCTCTGAGAACGCATCTGAAGACACATGATGACTTGAGTTGTAAATGGTGTGGTTCTCTGTTCAAGCAGCGAGCTCAATTGTTGGCACATTTAAGGGAAATCCATTCGGATGTCTGCGATCTCGTTAgttCCGCTAGTGCGGTAGCGGAGGCAAAAGTAGGCGTTAGACGAGTTAGGAAGTTAAAGGAGAACGTTAGCGCGCGGCAgatgcgccggcggcggcgcgcgaacAACGAGCTGCCCGAGGAATCAGAGAAGCGCATATCAAAGACGATGATGCGGAGAAACGCTATGACGCTTCTCGAATGTTCCACGGCTTGGGCATTCCGATGGTTCCACAGCGCCTTTTACTGCTCTTACTGTGACGCCAAGTTCGTAGACACCGCCCCGTTGCGTGACCACGTCCAGAGAAACCATTTAAACGAAGCGCCCACTAAAAAGATATTCGCCAAATTGACTGAAAATAATATGGTTAAGATTGATATAGGGAATCTCAGCTGCAGGCTATGCAATCATCCATTGACGGACATAGACGACCTGAAAGATCATCTAGTGTCTTTACACGGGAAGAAATTAAACTCTGATTATAGTGATGGCGTTCTACCCTTTAAACTTGATCAAAACGGATTCTTCTGCCAAAAATGCTTCTCACACTTCATTAGTTTCGCAAAAGTTAACGAACACATCAACACTCATTACAGAAATCACATTTGCGATGCATGCGGGAAAGCGTTCGTGTCCAAATCTAGGTTTCGCACTCACGTGCAGTCACATGAAAGAGGGAGCTTCCCCTGCGGGGACTGCGAGGAAGTATTAGATACAAGGGCAGCTAGAATGTGCCACAGGCTGCGGGTGCACAAAAAAGGTGTCCGATATACTTGTCCGCGATGCCCTGAAGTCTTCACAACATATTACGCTCGCGCAAAACACTTGGTAGACGACCACGCTCAACAGCAAAGAGATTACGATTGCGGTGTTTGCGGAAAGTCTTTTGAAACTAGCTGTAAAAGAGCAGCGCATTTTCGACTTGGCGTCCTCAAAGCACCTGAAAATTGCGACGCGTCGATTTCAATAAAATGGAAGCGGAAACGAAAAGTTGTGGAGGATAAAGCGAATGCAGCTCTTATTCTAGAATATTCTAATGCTGTGGTGTTTAGGTGGCAGCGCGGGAAATTCATGTGCGCGTATTGCCCGGCTATTTGTGCCAATGTGAGCGATGTACGTGTTCACTCAAATATACACATCAACAGACTTGACGTATTCGAAAATCAAGAAGTCAGGAACTCGTTTCCCCTCCGAATAGATATAACAGATCTGAAATGCACTATATGCAACCATAAATTCAAAGAGCTGAAGGACCTCAAAAGTCATTTAATCGATTCACATTCCAAGGAATTTAAATCGGAGTGCAGCGACGGTGTCATACCTTTTGTGCTGACGGGAAAGGAATACAGATGCGTCCATTGTGATGTGCTATTCGAAGGATTCATGAGTCTATTTATTCATATGAATAAGCATTATCAGAGTTACATTTGTCATACTTGTGGAAAGGGGTTTTCGGGCAAGCACAAATTGAGAGCGCACCAAATGTGTCACGAGTCAGGACACTTTGCTTGTTCCAAATGCGAAGCTGTCTTCCCAAATAGAGTAGCCAAAAATCGTCATGTTTCTGCGGTCCATGGGTCAAAGAAAAGATACCGCTGTCCTATCTGTGATGAACACTTTGATTCCTACCATTCCAGGTTAAGGCATTTGGACAAAACGCACGGGCAGAAAGCTGAATATCGTTGTAGCTTGTGCCCTTCTGTGTTCGggtccGTCGACCACAAACTTAAATGGAAACCGAAGCGCAAGTATAACGATCATAGAGACAACGCGGCTATTATAATTGAGTGTTCCAACGTGTGCCCGTTCAGGTGGAAGAGGGGCGCTTTCACCTGCGCGTTCTGTCCAATTTCCTTCGGAGACTTTAGCGGCGTGAGAGAACACGCGCTCGAGCACCCGAACCGGGTCGAGGCGATGCGTCTCGCGCGCCCCCTAGACAACGTCAAAGTTGAAATCACCGACCTACGCTGCGAACTCTGTCTACTCCTAATCAAAGACGTAGAAACACTCAAGGATCACTTACTCCAAACCCACAATAAGCCGATAAGCAACGATCATAGCATAGGCATCACTCCTTTCTTGATTAACGGAAAGGATTTTCTTTGCACGCACTGCGGCGAACATTTTGAGCTGTTCTCAAAACTAAACACGCACATGAATCACCATTACCCTAACAACATTTGCTTCCAATGCGGCAAAGCGTTTGCCGCCGCCCATAGACTAAAAGCGCATCTCGTTATACACGAATCTTCAAACATTATGCAATATAAATGCACGAAATGTGACGATGTATTTACGACTAGGGCTTTAAAAAATAGTCACATGGCTTTAACACACGGTCCGGAGTACCGATACCGGTGTCCTTACTGCAACGATTCATTTTTACGATATGCTGACAGAGCAAAACATTTAAAAACCGCGCATGACAGGAAAGTCGAATACCCTTGTCATCTATGTACAGCTGTTTTCTCGATGTGCAACCAACGCACCAAGCATATACAACAGGTCCATATAAGGCATAAGCAATTCTTCTGCGCATTATGTCCTTACCAGTTCGTCACAGCGGCGCAGCTTAGAAACCACATGGTCAAACACATTGGCGAGAGAAAGTACCAGTGTCAAGTTTGTAAGAAATCCTACGCGAGAACTAAAACGTTGAAGGAGCACATGCGCATACACAATAATGATAAGCGATTCGTCTGCGAATTTTGTAATAGCGCGTATGTGCAGAAATGTAGTTTACAAAGTCATATGAGAACTCACCATCCTAACGCCGAGCCTCTAAAGAAATTGAGATTGCCTAATGTGTACtga
Protein Sequence: MSEPGRSQTEHETVIKVEPTDVPIEHLLRGKPKYQRSARAEARLATKKNATAILECWSVVPFRWKRNQFKCAFCEAKFTDCNLLRLHVGTCSAQHSVKDIYSKFKEMSLINIDVTDALCRLCSLPYTDVKQMREHVIDHGYNFETKQPDGVLPFCLDKESWRCVICHEKFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHSEVHISGLFPCNECVRTFKMRAARDHHKAHAHAKAPRYECPQCNMRFDGYYDRMNHLNEAHREKEVSYSCPHCELTFKTSGKRAIHVRTVHFPPQRDYGCSFCEWNFKTAYELKRHMVKHTGERNFHCNVCEKSFPRNRALRTHLKTHDDLSCKWCGSLFKQRAQLLAHLREIHSDVCDLVSSASAVAEAKVGVRRVRKLKENVSARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLECSTAWAFRWFHSAFYCSYCDAKFVDTAPLRDHVQRNHLNEAPTKKIFAKLTENNMVKIDIGNLSCRLCNHPLTDIDDLKDHLVSLHGKKLNSDYSDGVLPFKLDQNGFFCQKCFSHFISFAKVNEHINTHYRNHICDACGKAFVSKSRFRTHVQSHERGSFPCGDCEEVLDTRAARMCHRLRVHKKGVRYTCPRCPEVFTTYYARAKHLVDDHAQQQRDYDCGVCGKSFETSCKRAAHFRLGVLKAPENCDASISIKWKRKRKVVEDKANAALILEYSNAVVFRWQRGKFMCAYCPAICANVSDVRVHSNIHINRLDVFENQEVRNSFPLRIDITDLKCTICNHKFKELKDLKSHLIDSHSKEFKSECSDGVIPFVLTGKEYRCVHCDVLFEGFMSLFIHMNKHYQSYICHTCGKGFSGKHKLRAHQMCHESGHFACSKCEAVFPNRVAKNRHVSAVHGSKKRYRCPICDEHFDSYHSRLRHLDKTHGQKAEYRCSLCPSVFGSVDHKLKWKPKRKYNDHRDNAAIIIECSNVCPFRWKRGAFTCAFCPISFGDFSGVREHALEHPNRVEAMRLARPLDNVKVEITDLRCELCLLLIKDVETLKDHLLQTHNKPISNDHSIGITPFLINGKDFLCTHCGEHFELFSKLNTHMNHHYPNNICFQCGKAFAAAHRLKAHLVIHESSNIMQYKCTKCDDVFTTRALKNSHMALTHGPEYRYRCPYCNDSFLRYADRAKHLKTAHDRKVEYPCHLCTAVFSMCNQRTKHIQQVHIRHKQFFCALCPYQFVTAAQLRNHMVKHIGERKYQCQVCKKSYARTKTLKEHMRIHNNDKRFVCEFCNSAYVQKCSLQSHMRTHHPNAEPLKKLRLPNVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01246115;
90% Identity: -
80% Identity: -