Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829516.1:5425044-5442177[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.6e-05 0.0067 17.5 1.5 1 23 410 432 410 432 0.96

2 16 0.0047 0.32 12.2 0.6 1 20 438 457 438 460 0.94

3 16 3.3e-05 0.0023 19.0 4.6 1 23 479 501 479 501 0.98

4 16 0.00021 0.014 16.5 4.7 1 23 507 529 507 529 0.99

5 16 4.1e-05 0.0029 18.7 5.3 1 23 535 557 535 557 0.97

6 16 8.9e-06 0.00062 20.8 7.1 1 23 563 585 563 585 0.97

7 16 8e-07 5.5e-05 24.1 2.9 1 23 591 613 591 613 0.97

8 16 0.00011 0.0079 17.3 6.7 1 23 619 641 619 641 0.97

9 16 2.2e-05 0.0015 19.6 6.4 1 23 647 669 647 669 0.98

10 16 5.4e-07 3.8e-05 24.6 1.9 1 23 675 697 675 697 0.98

11 16 5.5e-05 0.0038 18.3 7.9 1 23 703 725 703 725 0.98

12 16 8.7e-06 0.00061 20.8 5.6 1 23 731 753 731 753 0.98

13 16 0.00015 0.011 16.9 10.0 1 23 759 781 759 781 0.97

14 16 1.8e-06 0.00013 23.0 3.0 1 23 787 809 787 809 0.96

15 16 0.00081 0.056 14.6 0.3 1 23 816 838 816 838 0.96

16 16 0.02 1.4 10.3 5.2 1 23 848 870 848 870 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.6e-05	0.0067	17.5	1.5	1	23	410	432	410	432	0.96
2	16	0.0047	0.32	12.2	0.6	1	20	438	457	438	460	0.94
3	16	3.3e-05	0.0023	19.0	4.6	1	23	479	501	479	501	0.98
4	16	0.00021	0.014	16.5	4.7	1	23	507	529	507	529	0.99
5	16	4.1e-05	0.0029	18.7	5.3	1	23	535	557	535	557	0.97
6	16	8.9e-06	0.00062	20.8	7.1	1	23	563	585	563	585	0.97
7	16	8e-07	5.5e-05	24.1	2.9	1	23	591	613	591	613	0.97
8	16	0.00011	0.0079	17.3	6.7	1	23	619	641	619	641	0.97
9	16	2.2e-05	0.0015	19.6	6.4	1	23	647	669	647	669	0.98
10	16	5.4e-07	3.8e-05	24.6	1.9	1	23	675	697	675	697	0.98
11	16	5.5e-05	0.0038	18.3	7.9	1	23	703	725	703	725	0.98
12	16	8.7e-06	0.00061	20.8	5.6	1	23	731	753	731	753	0.98
13	16	0.00015	0.011	16.9	10.0	1	23	759	781	759	781	0.97
14	16	1.8e-06	0.00013	23.0	3.0	1	23	787	809	787	809	0.96
15	16	0.00081	0.056	14.6	0.3	1	23	816	838	816	838	0.96
16	16	0.02	1.4	10.3	5.2	1	23	848	870	848	870	0.99

Sequence Information

Coding Sequence: ATGAATCCAGAGCATCACAATATCAATACGGGTGGCGGCCAGCCCCCAGGAAATTCAGAGcagcagcagcaagcAACGAATGTGACCCCGACGAGTTCTGCAACGGACCTGCGAGTGAACTCGGCGGCAGTAAACGTCGCTTTGTCTAGCGTCGCGAAGTACTGGGTGTTTACAAATTTGTTCCCGGGTCCTATACCGCAAGTTTCAGTGTATGGACTTCCCACTGGAACGCGGATAGACAATGGAAAACCAGTACAGGATATTGGGCAAGCCCATGCAAGCATACTTAATGGTGATCCAAACATTATACTTGGACATCACACAGGGCAGTCACAGGTCACTGTCTCTGCAGCGCAACAGTTACCACAAATCATTGCTACTCAAACTCAACCTCATGATGCTTTGGCCCATGTACAGCAACAAGAGCTAGCATCACAGCAGGGCTCGGGCACAACCCAGGTCACCGTGAGTCCAGGTCAAACTACCCATCAGGTACCCAATAACCGGGTCGAGTTTGTACACCATAACATTGATATGGTAAATCATGTGGATCATCATTTACAGCAACACATAATGCAACAACAGCTGATGGCAGCAACGCGCCCTGAACACTCTAATCAACAGATTCAGTTGACTGTGAGTGAGGATGGCATCGTCACAGTGGTGGACCCTGGGGGAGGGAAGCTAGTGGACAAGGAGGAACTACACGAAGCCATCAAGATGCCTGCAGACCACACCCTCACTGTGCACCAGTTGCAGCAAATCGTCGGACAACAGGTGTTAGAAAATGTGGTCCGCATCGAGCAAGCGACCGGCGAGCCGGCGAACATCTTAGTGACTCAGAACCCGGACGGCACGACGTCAATAGAAGCCAGCGCCGCCGATCCGCTCGCGGTTGTGAAGGACGAGAAAAGCGGTTCCAAGATAGAAACCGCGCATTTTGCGCTGCCTGCTGAAATAAAGGACCTCAAAGGCATTGACTTAAAGAGTGTAGGAGCGATGGGGATGGAAGGAGCGGTGGTGAAGATATCGACCGGAGCTTCCGATCACGATATGCACGCCATGTACAAAGTTAATGTCGAGGACTTGTCGCAGCTGCTGGCTTACCACGAAGTCTTTGGGAAACTCAACGCGGACGGCCAGCCGCAAACCAAGGTGATAGGCGAAGTCGAAGTAGAAGCGGGAACCAGCGCGGGCATGGCGGCGGAGGAGTCGTCGCCCGGACACCACGCCTGCGACATCTGCGGGAAGATATTCCAGTTCCGATACCAGCTTATTGTTCATAGACGATATCACGGCGAGCGGAAACCCTTTACGTGTCAAGTTTGTGGATCGGCCTTCGCGAATCCTGTTGAATTGTCAAGACACGGAAAATGCCATCTTGcCGGCGATCCAGCCGACAGGACGGCCAAACGCTTGACCCAGGACAAGCCCTACGCGTGCACGACTTGCCATAAAACGTTCGCGCGTAAAGAGCACCTTGACAACCACGTACGCAGTCACACCGGGGAAACGCCCTACAGGTGTCAGTTCTGCGCCAAAACGTTCACTCGCAAAGAGCACATGGTTAACCACGTGCGGAAACACACCGGCGAGACCCCGCACCGCTGTGACATCTGCAAGAAGAGCTTCACCAGGAAAGAACACTTCATGAACCACGTCATGTGGCACACGGGTGAAACTCCACACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGCCAACCATATGCGCTCCCATACAAACGATACCCCCTTCCGCTGCGAACTCTGTGGGAAGTCTTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACTGGTGAAACGCCGCACCGCTGCGATTTCTGCTCCAAAACCTTCACACGCAAGGAGCACCTGCTCAACCACGTGCGACAACACACGGGCGAGTCCCCGCACCGCTGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAATCACGTGCGCCAGCACACGGGAGAGACGCCTTTCCAGTGCGGGTATTGCCCCAAGGCGTTCACGAGGAAGGATCATTTAGTGAACCACGTTCGCCAGCACACGGGCGAGTCCCCGCACAAGTGCTCGTTCTGCACGAAGTCCTTCACGCGCAAGGAGCACCTCACGAATCACGTGCGGCAACACACGGGAGAGTCGCCGCACCGCTGCACTTACTGCGCGAAGTCTTTCACGAGGAAGGAACATCTCAATAACCACGTTAGAATACACACGGGCGAGTCACCACATCGGTGCGAATTCTGTCACAAGACGTTCACCCGGAAAGAGCACCTGACCAACCACCTGAAGCAGCACACCGGAGACACGCCCCACGCCTGCAAAGTCTGCTCTAAGCCTTTCACACGCAAGGAGCATCTTGTCGCACATATGAGATCGCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAATCTGCTGTTCCACGAGCGCTCGCACAACAAGAACGGCAGCGGCGCTCGCCCCTTCCGTTGTGACATATGCTCCAAGGATTTCATGTGCAAAGGTCATTTGGCGTCGCACCGGCGGACGCACAGCGAGGCGCCGGTGGAGGGCGCGGGGGACGCGGGGGGCGCGCCCGCCGAGGACTGCGGCGACTGCGTCAAGTGCGAGAAGGACCCGCCCGACCAGCCCGAGCGGAAACACGACATCAGACCAGCAGCCGAAAGCAGACCTGTTGAAAACGCTGTAGCACAAAATCCCCAAGCAAATGCAACTGTGATGCAAATTACTAGCcaaGTGCGGGCGGGCGCCGCGTCGGGCGCGGCCGCCGTCCCGAGCGCCGCCTTCAcggccgccgcgccgctgcACCACCCCGTCACCGTCAACTACTAA
Protein Sequence: MNPEHHNINTGGGQPPGNSEQQQQATNVTPTSSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIDNGKPVQDIGQAHASILNGDPNIILGHHTGQSQVTVSAAQQLPQIIATQTQPHDALAHVQQQELASQQGSGTTQVTVSPGQTTHQVPNNRVEFVHHNIDMVNHVDHHLQQHIMQQQLMAATRPEHSNQQIQLTVSEDGIVTVVDPGGGKLVDKEELHEAIKMPADHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNPDGTTSIEASAADPLAVVKDEKSGSKIETAHFALPAEIKDLKGIDLKSVGAMGMEGAVVKISTGASDHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQTKVIGEVEVEAGTSAGMAAEESSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHLAGDPADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLNNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNGSGARPFRCDICSKDFMCKGHLASHRRTHSEAPVEGAGDAGGAPAEDCGDCVKCEKDPPDQPERKHDIRPAAESRPVENAVAQNPQANATVMQITSQVRAGAASGAAAVPSAAFTAAAPLHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00409523;
90% Identity: iTF_00409523;
80% Identity: -