Basic Information

Insect: Clepsis dumicolana
Gene Symbol: lrrfip2
Assembly: GCA_963691665.1
Location: OY829509.1:16363679-16376442[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.6e-49 7.9e-45 154.2 12.2 1 141 121 254 121 263 0.92

2 12 3.7e-05 1.1 9.2 0.2 115 141 265 291 258 303 0.85

3 12 3.7e-05 1.1 9.2 0.1 115 141 302 328 295 340 0.85

4 12 4.1e-05 1.2 9.1 0.1 114 140 338 364 329 370 0.85

5 12 4.1e-05 1.2 9.1 0.2 115 141 376 402 369 411 0.86

6 12 3.4e-05 1 9.3 0.1 114 141 412 439 400 449 0.85

7 12 3.8e-05 1.1 9.2 0.2 114 141 449 476 440 485 0.86

8 12 3.4e-05 1 9.3 0.2 114 141 486 513 477 525 0.85

9 12 3.4e-05 1 9.3 0.1 114 141 523 550 514 562 0.85

10 12 3.6e-05 1.1 9.2 0.2 114 141 560 587 552 599 0.85

11 12 1.6e-28 4.9e-24 85.9 3.6 114 265 597 748 588 775 0.84

12 12 0.15 4.5e+03 -2.6 8.0 120 169 787 833 777 846 0.45

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.6e-49	7.9e-45	154.2	12.2	1	141	121	254	121	263	0.92
2	12	3.7e-05	1.1	9.2	0.2	115	141	265	291	258	303	0.85
3	12	3.7e-05	1.1	9.2	0.1	115	141	302	328	295	340	0.85
4	12	4.1e-05	1.2	9.1	0.1	114	140	338	364	329	370	0.85
5	12	4.1e-05	1.2	9.1	0.2	115	141	376	402	369	411	0.86
6	12	3.4e-05	1	9.3	0.1	114	141	412	439	400	449	0.85
7	12	3.8e-05	1.1	9.2	0.2	114	141	449	476	440	485	0.86
8	12	3.4e-05	1	9.3	0.2	114	141	486	513	477	525	0.85
9	12	3.4e-05	1	9.3	0.1	114	141	523	550	514	562	0.85
10	12	3.6e-05	1.1	9.2	0.2	114	141	560	587	552	599	0.85
11	12	1.6e-28	4.9e-24	85.9	3.6	114	265	597	748	588	775	0.84
12	12	0.15	4.5e+03	-2.6	8.0	120	169	787	833	777	846	0.45

Sequence Information

Coding Sequence: ATGGGCAATCAATCCAAAGGTGTAACGCCTGACAATAGCGACGAGGAGAGCGGGGACGCGTTCACAGACGGCGACTTCGGGGACACCGACGAAGAGTTACACGTAGAACGTAGCGATGGCTCTAACACTACCCTTATCCCTGTTAACGAAACTGTAAATGCAGAAGTCATGGATATAGTTCGCGGCGCTCGTAATGGTTTCGATGAACACGATCACACCAAAGTTAACGGACATAAAAGCAGTGATAGTGACTTGGAATGTCGCAGCAACGGCGAGCTCGCGATGCCTGACGCGCGGAGGGACTCCCACGGCGACCAGAACCCTTCCATCGTCGGCATTCTCGGTGGACAGCAGGATCATGCGGAGCAGCGcctggcggcgcggcgcgcggcgcgggcggagGCGCGCGAGATACGCATGCGCGAGCTGGAGCGCCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCCTACGACATGTACGCCGAGACGGTGGGGCGGCGCGGGACGCCTCGGCTGGCGGGCCTCGCGCCGGCGGCGCTGCACTCGCCAAGGCGCGCCTCCGAGGACTCCGCCGACGACTCCTTCAACGTCAAGGACCTCAGGCACGATCTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTCGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAACACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAACACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAGCACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAACACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAGCACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAACACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAGCACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAGCACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAGCACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGGCGGCCGAGCACGCGCAGCTGCAGGTGAGCACTAGCAACCTGACGCAGCTGACAACACAAGCGGCGCGCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGATGGCGGCCGAGCACGTCATGCGCGAGCACAAAGAGAAATGCTCGTCGCACGAGCGGCTTAAGCGCGAGCACGCGTCCCTGGAGCGCGagctggcggcggcgcgcgacgCCGTGCGCGCGCGCGACGCTGCGGCCGCGGCGGCCGGCTTTGCGTTCGTGGacgccgcgcccgcgctcgcGCTCAACAACaaccccgcgccgcccgcgccgcccgccctgGCGCTCGTCACGCACCAGAACGAGCAGCTGCTCAACGACGCGGGCGAGGGGACACTAGACGTGCGGTTGCAGAAGCTGTTAAGCTCGAAGCAGAGCCTGGAGGGCGAGGTGCGGCGCCTCAAGCTGCAGCTCAGCGAGGAGCAGCACAACGGCGTGGCGCGCGCGCACGACCACGAGCTCGAGACCGAGCTGGAGGCGCTCCGCAAGTCGACGGCGGAGGCCAAGgcacgcgcggcgcgggcggagGCCGAGGCGGCGttacaggcggccggcgccgccCGCCTCGCCGCGCAGCTGTCGCGCGTCAAGGCGCAGCACGACGCGCGCGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGCGAGAGAAGCTCTAAACAGAGTAGAAGAGCTAGAGACAGAGAACAGCCATCTCACGAAGCGGCTCGACAAACTGAAGAACGCGAAATCTGCGCTGCTCAAAGAGCTGTGA
Protein Sequence: MGNQSKGVTPDNSDEESGDAFTDGDFGDTDEELHVERSDGSNTTLIPVNETVNAEVMDIVRGARNGFDEHDHTKVNGHKSSDSDLECRSNGELAMPDARRDSHGDQNPSIVGILGGQQDHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGTPRLAGLAPAALHSPRRASEDSADDSFNVKDLRHDLKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEELAAEHAQLQVSTSNLTQLTTQAARGYQLELLKDRIEEMAAEHVMREHKEKCSSHERLKREHASLERELAAARDAVRARDAAAAAAGFAFVDAAPALALNNNPAPPAPPALALVTHQNEQLLNDAGEGTLDVRLQKLLSSKQSLEGEVRRLKLQLSEEQHNGVARAHDHELETELEALRKSTAEAKARAARAEAEAALQAAGAARLAAQLSRVKAQHDARDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -