Cdum001100.1
Basic Information
- Insect
- Clepsis dumicolana
- Gene Symbol
- jarid2b
- Assembly
- GCA_963691665.1
- Location
- OY829505.1:2663277-2686320[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-19 1.8e-15 57.8 0.0 6 88 317 396 313 397 0.92
Sequence Information
- Coding Sequence
- ATGAAACGGATTAGTGTAGCGGCGTCCGAAGACGGGCGCGACCAGCGACCACGCGCAGTCGACCCCGAGTCCTGCCCCTCAAACCGCTACAACTCGGTACAAGACGTGATGGCAGCCGCCAACGCCAAGTGTCAATCACTGGCGTCGCGGTGCCGAAGGTGCCGCTGGTGCACCATCGTTGACAAGATAATGCAACTCACACGCCTGGTTTGTAACGAGatgcCGGCAGCTTGCATGACAGAAGCTGACGTGTATGACTTCAACGCCGAGATAGTCGACGCCATTAGCCCCTCGCTGTCCTGTCTGCGACACCAGAGCCGGCTCGCGCGCGCGATCGAGGAGGAGAGCCACCTCTTCATGGATTTGCTGCCGCAGCACAGCCCACATATTATTCAGATAACCCTAAAGCGCACAGCCGAGAACCAGTGCATCTCCAAAGCCTGCCTGGTGGACCGTGACGTGATGAGGAACACCCCGCAGCCCAGCCTGATTGAGCACGAGAACCTGCTGGACAGGCTGCTGGAGTGCCTGTCTGCTGGGTCCCAGAACAAGGAACGGGAGGAGGAGCCCCAGCCGTCTACCAGTAGGGCTGCTCCGGCCGACGCGCCGGATGTGATCCGTGCGGCGCTGCGGACCTGCACAGTGGACCTGGGAAAGCAGATCCCGGACCAGCCAGACTCTAGCTCGAACGTTGACGCGTCGCAGGACGCTGCCGGCTCGGGGAAGGTGCAGGAGGCTCCCATCTTCAGACCCACCAAAGAGGAGTTTCAGGACCCCATAGCGTACTACGAAAAGATCGCTCCCATGGCCTATAAATTCGGCCTTTGCAAGATAATCGCGCCCGAAGGGTTCACTCCGCCCTGCGTCATGGACGAGAATATGCGGTTCACCGTCATCTACCAGTACATCTCCAAGCTGTACTGCCGCTGGGGGCCGGCTTCGCGCGAACTCGCTGCCATCAAGGCCCACATGAAGACACAAAGCGTGCCCATCGCCCGCTCGCCGCTGCTGGACGGCACGGAAGTGAACTTGCCCAAGTTGCACCACTCGGTGCAACGGAACGGGGGCCCGACCAACGTGATACAGCGCAAGCGGTGGGGCCGCGTCGCCGAGGAGATGAAGCTGACGAAACTGCAGAACCCAGAGAGGAAACTAGACCAGCTCTTCATGAGATACCTGCTGCCCTACACAATGCTGTCCAATCAGGAGCGCCAGAAGAAAATGGCCGAGGTGGAGAAATGCTGGACCATGAAGTACCAGAAGATGCTTGAGCGTGCTCGCAACCCGTTCCACCGGCAGAAGCGGATGCTCGGCGAGTCGGAGTCCTCGGAGGACGAGGCCGAGGACAAGGCGATCGCCGAGGCCCTGCGGGAGGCCGAGGACTGCATAGTGCAGGGCCGGGTGATGCATCTCGCCACCTTCAGGAAGATCGCGACGTCCCTCATGGAGGCTCACTTGGAGCCGGGCGCTGAGCCGACGGCGGCTGCAGCGGAGGCTGCGTACTGGCGCGCCGTGCTGCACGGCAACGAGCACATAGTCGCCAACACTGCCTCCATCGACACCGGGGAGGAGGGCTACGGCTTCCCCAAGGAGCCCCGGGCCGAGTACGGGAGCCACCCGTGGAACTTGAAGACGCTGAGCCAGAACCCGAAGAACGTGCTCCGTTTCCTTGGCCCTGTGCTGGGGGTGACGGTCCCCACCCTGCATCTCGGCATGCTGTTCAGCACGTCCTGCTGGCACCGCGACCCTCACGGCCTGCCCTGGACAGAGTTCATGCACAGCGGCCCCGAGAAGATATGGTACGGCATCCCAAGCGGCCAAAGTGCCAACTTCCGCAACGCAGTCGAGACCCTCTGTCCAGCGTATGTCCAAAGCAAGTCCATCTGGCTGGCCTCAGACATCGCGATGATCCCGCCCGACATACTCTCGGAGCACAACGTGACGCTCTCGCGCGTCACGCAGCGCCCCGGGGAGTACATCATGGTGTTCCCGGAGGCCCACTCGTGCTCCATCACGACCGGCTTCGCCATATCCGAGAGCGTCTATTTCGCCTCGAACTCCTGGCTTGATAATGTTCATCAGCTGTTCCAAGAGCTGCGTAACAGCTGTGAGCCGACAATGTTCTCGCTGGAGCAGCTGCTCATGAGCGGCAGGCTCGACCGCGAGGCGCCGCGGCGCGTGCTGCCGGCCGTCCTCGCCAAGATCGTCGGTGACGAGCTCCATCACCGACGAGAGCTGGAGAAGCGAGGGCTGCAGGTGCAGATTTACGAGTCTGTCGAAGGTGCGCAGTCGCAGGCGTGGACTGCGCGCAACCAGGACGAGTGCGAGTTTTGTCGCTCGACGCTCTACATCTCCATGGTGATGGGCCTGCCGGGAAAAAAGTCCCGTGTGTGCCCTGAACACGCGCTTCGACTGCTAGAATCGCGGAAATACAGCGAGGTCAGCACGAAAACTCTCGCTTTCGTGTCGCGGTACTCTTCCGCCATGCTTCAGGAACTAGTGGACAAACTAGACGACGGTTGTGACTAG
- Protein Sequence
- MKRISVAASEDGRDQRPRAVDPESCPSNRYNSVQDVMAAANAKCQSLASRCRRCRWCTIVDKIMQLTRLVCNEMPAACMTEADVYDFNAEIVDAISPSLSCLRHQSRLARAIEEESHLFMDLLPQHSPHIIQITLKRTAENQCISKACLVDRDVMRNTPQPSLIEHENLLDRLLECLSAGSQNKEREEEPQPSTSRAAPADAPDVIRAALRTCTVDLGKQIPDQPDSSSNVDASQDAAGSGKVQEAPIFRPTKEEFQDPIAYYEKIAPMAYKFGLCKIIAPEGFTPPCVMDENMRFTVIYQYISKLYCRWGPASRELAAIKAHMKTQSVPIARSPLLDGTEVNLPKLHHSVQRNGGPTNVIQRKRWGRVAEEMKLTKLQNPERKLDQLFMRYLLPYTMLSNQERQKKMAEVEKCWTMKYQKMLERARNPFHRQKRMLGESESSEDEAEDKAIAEALREAEDCIVQGRVMHLATFRKIATSLMEAHLEPGAEPTAAAAEAAYWRAVLHGNEHIVANTASIDTGEEGYGFPKEPRAEYGSHPWNLKTLSQNPKNVLRFLGPVLGVTVPTLHLGMLFSTSCWHRDPHGLPWTEFMHSGPEKIWYGIPSGQSANFRNAVETLCPAYVQSKSIWLASDIAMIPPDILSEHNVTLSRVTQRPGEYIMVFPEAHSCSITTGFAISESVYFASNSWLDNVHQLFQELRNSCEPTMFSLEQLLMSGRLDREAPRRVLPAVLAKIVGDELHHRRELEKRGLQVQIYESVEGAQSQAWTARNQDECEFCRSTLYISMVMGLPGKKSRVCPEHALRLLESRKYSEVSTKTLAFVSRYSSAMLQELVDKLDDGCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00325155; iTF_00156039; iTF_00021124;
- 90% Identity
- -
- 80% Identity
- -