Basic Information

Insect: Clanis bilineata
Gene Symbol: LRRFIP2
Assembly: GCA_036417725.1
Location: CM071146.1:17721601-17732051[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.9e-80 7.8e-76 255.8 18.6 1 297 19 306 19 309 0.88

2 8 1.7 2.2e+04 -5.1 10.3 1 39 305 343 305 375 0.80

3 8 2 2.6e+04 -9.8 11.2 140 174 404 439 389 516 0.63

4 8 0.45 6e+03 -3.2 2.0 45 71 573 599 563 605 0.74

5 8 0.87 1.1e+04 -4.2 0.5 54 71 625 642 616 647 0.64

6 8 0.76 1e+04 -4.0 0.5 54 71 668 685 657 690 0.63

7 8 0.76 1e+04 -4.0 0.5 54 71 711 728 700 733 0.63

8 8 0.95 1.3e+04 -4.3 7.8 12 160 763 800 745 815 0.40

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.9e-80	7.8e-76	255.8	18.6	1	297	19	306	19	309	0.88
2	8	1.7	2.2e+04	-5.1	10.3	1	39	305	343	305	375	0.80
3	8	2	2.6e+04	-9.8	11.2	140	174	404	439	389	516	0.63
4	8	0.45	6e+03	-3.2	2.0	45	71	573	599	563	605	0.74
5	8	0.87	1.1e+04	-4.2	0.5	54	71	625	642	616	647	0.64
6	8	0.76	1e+04	-4.0	0.5	54	71	668	685	657	690	0.63
7	8	0.76	1e+04	-4.0	0.5	54	71	711	728	700	733	0.63
8	8	0.95	1.3e+04	-4.3	7.8	12	160	763	800	745	815	0.40

Sequence Information

Coding Sequence: aTGGCTTCACCACTTACAAAAGTACCATTTGTTATAACAGGGACTGGGAAACgaGCGGAACAGCGTTTGGCGGCGCGTCGAGCGGCGCGTGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGTGAACAGGAAGACCATGCCGACAAAGCCTACGACATGTATGCAGAGACggtggggcggcgcggcggcgggcggctgGCGGCGCTCAGCCCTGGCGGCGTGCACTCGCCGCGGCGCAGCTCCGAGGACTCCGTCGACGACGGCTTCAGCGTCAAGGACCTCAGGCACGAGTTAAAAGAGGTTGAGGAGAAGTTCCGCAAGGCGATGATTCTAAACGCCCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTATGCACAACTGCAGCGTGAGCACAGGGAGAAATGTTCAGCTCACGAGCGTCTGAAGCGCGAGCACGCGTCCCTCGAGCGCGAGGTGGAGGCGGCGCGGGGGGCGGTGCGCGCCAGGGACGCCGCCGCCAACGCCGCGGGGTTCGCGTTCGTAGACGCGGCGGGGAGCGAGGGCACGGGGAGCacggggggcgcggggggcgaGGGAGACAACGCACCGCCCCTCGCGCTCGTGTCGCACAGCGCCGAGCAGCTGCTCAACGATGCCGGCGAGGGCACGCTAGACGTGCGATTGCAAAAGCTGGTGAGTTCGAAGCAGGCGTTGGAGTCAGAGGTGCGTAAGCTGAAGCTCCAGCTCAACGAAGAGCGCGCCGCCCGCCACAACGGTGTCGCCAATCATCACGACCACGAGTACGAGGGGGAACTGGAAGCACTCCGTAAGTCAGTGTCGGAGGCTAAAGCACGAGCGGCCCGTGCAGAAGCAGAGGCGGCGCTGCAGGCGGCCGCGACCGCACGCCTCGAGGCGCAGCTGCAACGCCTGCGCGCGCGACAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCGACAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCGACAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCGACAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCGACAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCGACAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGTACGCTACTGTACTCTATGTATACTGCAGCGCGACCGCACGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGAGGCGACGTCTGCAGCGGGAGGCAAGGGAAGCTCTAAACCGAGTGGAGGAGCTGGAGACAGAGAACAGCCACTTGACGAAGCGGCTGGACAAGCTCAAGAACGCCAAGTCTGCGCTACTGAAGGACCTGTGA
Protein Sequence: MASPLTKVPFVITGTGKRAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGGRLAALSPGGVHSPRRSSEDSVDDGFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSAHERLKREHASLEREVEAARGAVRARDAAANAAGFAFVDAAGSEGTGSTGGAGGEGDNAPPLALVSHSAEQLLNDAGEGTLDVRLQKLVSSKQALESEVRKLKLQLNEERAARHNGVANHHDHEYEGELEALRKSVSEAKARAARAEAEAALQAAATARLEAQLQRLRARQDHQDEHEELLKQERRRLQREVRYCTLCILQRDRTPRGAAAAPARAAGPPGRARGAAQAGEATATARLEAQLQRLRARQDHQDEHEELLKQERRRLQREVRYCTLCILQRDRTPRGAAAARQDHQDEHEELLKQERRRLQREVRYCTLCILQRDRTPRGAAAARQDHQDEHEELLKQERRRLQREVRYCTLCILQRDRTPRGAAAAPARAAGPPGRARGAAQAGEATSAAGGTLLYSMYTAARPHASRRSCSACARGRTTRTSTRSCSSRRGDVCSGRYATVLYVYCSATARLEAQLQRDRTTRTSTRSCSSRRGDVCSGRYATVLYVYCSATARLEAQLQRDRTTRTSTRSCSSRRGDVCSGRYATVLYVYCSATARLEAQLQRDRTTRTSTRSCSSRRGDVCSGRYATVLYVYCSATARLEAQLQRLRARQDHQDEHEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -