Basic Information

Insect: Cinara cedri
Gene Symbol: -
Assembly: GCA_902439185.1
Location: CABPRJ010002452.1:43846-47009[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.28 3.2e+02 1.6 0.6 12 34 69 91 64 96 0.73

2 16 0.0068 7.8 6.7 3.2 18 29 103 114 87 124 0.76

3 16 0.22 2.6e+02 1.9 2.8 6 31 148 176 143 180 0.73

4 16 0.036 42 4.4 1.0 13 29 181 197 174 203 0.76

5 16 2.6e-05 0.03 14.5 0.6 14 37 210 235 200 235 0.86

6 16 0.015 17 5.6 2.6 13 34 237 258 234 261 0.79

7 16 0.0011 1.2 9.3 1.8 5 36 258 290 254 295 0.78

8 16 0.021 24 5.2 2.4 13 34 293 314 287 320 0.77

9 16 9.3e-05 0.11 12.7 0.4 17 37 325 347 315 347 0.87

10 16 0.014 16 5.7 1.2 14 37 372 396 366 401 0.73

11 16 0.034 39 4.5 1.4 13 34 399 417 389 423 0.76

12 16 0.00058 0.67 10.2 2.0 13 36 427 452 417 457 0.78

13 16 0.023 27 5.0 2.1 13 34 455 473 448 481 0.76

14 16 0.0014 1.6 9.0 2.0 13 41 483 512 474 513 0.82

15 16 0.036 41 4.4 0.4 15 29 513 527 510 537 0.74

16 16 0.0016 1.8 8.7 1.3 14 36 540 564 528 569 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.28	3.2e+02	1.6	0.6	12	34	69	91	64	96	0.73
2	16	0.0068	7.8	6.7	3.2	18	29	103	114	87	124	0.76
3	16	0.22	2.6e+02	1.9	2.8	6	31	148	176	143	180	0.73
4	16	0.036	42	4.4	1.0	13	29	181	197	174	203	0.76
5	16	2.6e-05	0.03	14.5	0.6	14	37	210	235	200	235	0.86
6	16	0.015	17	5.6	2.6	13	34	237	258	234	261	0.79
7	16	0.0011	1.2	9.3	1.8	5	36	258	290	254	295	0.78
8	16	0.021	24	5.2	2.4	13	34	293	314	287	320	0.77
9	16	9.3e-05	0.11	12.7	0.4	17	37	325	347	315	347	0.87
10	16	0.014	16	5.7	1.2	14	37	372	396	366	401	0.73
11	16	0.034	39	4.5	1.4	13	34	399	417	389	423	0.76
12	16	0.00058	0.67	10.2	2.0	13	36	427	452	417	457	0.78
13	16	0.023	27	5.0	2.1	13	34	455	473	448	481	0.76
14	16	0.0014	1.6	9.0	2.0	13	41	483	512	474	513	0.82
15	16	0.036	41	4.4	0.4	15	29	513	527	510	537	0.74
16	16	0.0016	1.8	8.7	1.3	14	36	540	564	528	569	0.80

Sequence Information

Coding Sequence: ATGGTTGAAGGCGCAACATCTTATAATCCTTGTTATGAAGATAAATCAAAGCAACTAGGATTTGTATATAACTCTAAACAGGTAGATGAAGAAATAAATATCCATGTTAAAAAAGAGGTAGACGTCATTGATGGTTTCGTTTATGAGAGTGAGATTGTTATTGAAACTGATCCAATAAAATCTTTTTTGAATCAAGAATTACAATTTGAAGAAAAATATTTTGAATGCTCTTACTGTAGTAACTTATTTTTTTCAAAATCGCATATAAAAAACCACTTGAAAGTTCATAGTGATGTAAGACTTCAGAAATGTAACATCTGTGAGAAGACATATTCTTTAAAACAAAATTTAGACAAACATAAGAAAACTCATTCGGGAGATAAACTTTATGAATCTAAAGAGCGCGAAAAGACATTTACTCAGTTATCCACTTCAAAGAACCATATAGAAACACATAAGGGAAAGCCCTGTAAATGTAGTATGTGTACAAAGACATTTTCTCTTAAAACCATTTTAAATGTCCATGAGACAACTCATACAGAGGAAAAGCTCTCTGTATGTGGCATATGTAAGAAGACATTTATCAATGAAACCACTTTAAAGGTCCATGAAAGAATTCATACAGGAGAAAAGCCTTATGAATGTAATTTTTGTAAGAAGTCATTTTCAAGAAAGGATCTTCTAAATATACATAATTTAACTCATAAAGAAAATAAATCTTATAAATGTGATATTTGTAAGAAAACATTTACTGTTAAAAACACTTTAAAGAACCATGAAAGAATTCATACAGGAGAAAAGCCGTATGAATGTAATTTTTGTAAGAAGTCATTTGCAAGAAAGGACCATTTAAATGTACATAAATTAACTCACTTGGAAGAAAAACCTTATAAATGTGATATTTGTAAGAAAACATTTACTGTTAAAAACACTTTAAAGAACCATGAAAGAGTTCATACAGGAGAAAAGCCGTATGAATGTAATTTTTGTAAGAAGTCATTTGCAAGAAAGGATCTTCTAAATATACATAATTTAACTCATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAATTCATACAGGAGAAAAGCTTTATGAATGTAAATTGTGTAATAAGGCATTTACTCAGCGATCCTATTTAACATTACATTTAAAATCTCATTCGGAAGAGAAGCCTTTTAAATGTGACATTTGTAACAAAACTTTTGCTTTTAAAAAAACTTTAAAGGCCCATAAAACTATTCATACAGGAGAAAAGCCTTATGAATGTAACTTTTGTAAGAAATCATTTTCAAGAAAGGACCATTTAAATGTACATAAATTAACTCACTTGGAAGAAAAGCCTTATAAATGTGATATTTGTAAGAAAACATTTACTGTTAAAAACACTTTAAAGACACATGAAAGAATTCATACAGGAGAAAAGCTTTATGAATGTAAATTGTGTAATAAGGCATTTACTCAGCGATCCTATTTAACATTACATTTAAAATCTCATTTGGAAGAAAAGCCTTTTAAATGTGACATTTGTAAGAAAACTTTTGCTCTTAAACAAACTTTAAAGACTCATGAAACAATTCATACAGGAGAAAAGCCGTATGAATGTAATTTTTGTAAGAAGTCATTTGCAAGAAAGGACCATTTAAATGTACATAAATTAACTCATATTAAAAAAAAGCCTTTAGAAAATAATATGAGTCCATTAATATTTTCTTAG
Protein Sequence: MVEGATSYNPCYEDKSKQLGFVYNSKQVDEEINIHVKKEVDVIDGFVYESEIVIETDPIKSFLNQELQFEEKYFECSYCSNLFFSKSHIKNHLKVHSDVRLQKCNICEKTYSLKQNLDKHKKTHSGDKLYESKEREKTFTQLSTSKNHIETHKGKPCKCSMCTKTFSLKTILNVHETTHTEEKLSVCGICKKTFINETTLKVHERIHTGEKPYECNFCKKSFSRKDLLNIHNLTHKENKSYKCDICKKTFTVKNTLKNHERIHTGEKPYECNFCKKSFARKDHLNVHKLTHLEEKPYKCDICKKTFTVKNTLKNHERVHTGEKPYECNFCKKSFARKDLLNIHNLTHKXXXXXXXXXXXXXXXXXXRIHTGEKLYECKLCNKAFTQRSYLTLHLKSHSEEKPFKCDICNKTFAFKKTLKAHKTIHTGEKPYECNFCKKSFSRKDHLNVHKLTHLEEKPYKCDICKKTFTVKNTLKTHERIHTGEKLYECKLCNKAFTQRSYLTLHLKSHLEEKPFKCDICKKTFALKQTLKTHETIHTGEKPYECNFCKKSFARKDHLNVHKLTHIKKKPLENNMSPLIFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00340764;
90% Identity: iTF_00340764;
80% Identity: iTF_00340764;