Cced009597.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- SUB1
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010002396.1:434489-436343[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-28 5.3e-24 83.6 0.3 1 51 46 96 46 97 0.98
Sequence Information
- Coding Sequence
- ATGGCGCCAAAGAATTCCAAACGTAACGCTTCTGATGACTCTTCTTCCGATTCAGACGGACCACTTGATAGAAATCCTCCTCCAAAGAAATCTAAACCAGCTGTTGCAAAGAAATCCAATCAAGATGAAGTTTCTTTCGAACTGGATAAAAATCGTTTTGTTAAAGTAAGAGAATTTAAGGGAAAACTGTTTGTAGATATACGTGAATTCTACGAGAAAAATGGAGAATTGTGTCCAGGAAAAAAAGGCATATCTTTACATATTGCTCAATGGAACAAACTTAGAGAGCAAATTGATGATATCCAGGAAGCTATTGAAAAATTCTAA
- Protein Sequence
- MAPKNSKRNASDDSSSDSDGPLDRNPPPKKSKPAVAKKSNQDEVSFELDKNRFVKVREFKGKLFVDIREFYEKNGELCPGKKGISLHIAQWNKLREQIDDIQEAIEKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499652;
- 90% Identity
- -
- 80% Identity
- -