Basic Information

Insect: Cinara cedri
Gene Symbol: egg
Assembly: GCA_902439185.1
Location: CABPRJ010002374.1:13512-20779[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-09 2.9e-06 26.9 0.0 3 70 590 657 588 663 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-09	2.9e-06	26.9	0.0	3	70	590	657	588	663	0.83

Sequence Information

Coding Sequence: ATGGCTTCATCAAATGGTTCATCAAATGGTTCATCAACAGAAAACGCAAAAGGCAAAAAAATAAATAACCAGCGCCTCCAATGTGTAAATAGATATTGTATGCATGGTGATGGCCTAATGAAAGCCTATGATTTTGTGTGCAATTACTATCATGTTCGCTTTACACGAACGAAAGAGGTTTGCTCAACGTGTTTTAAAAATTGTTTGGATCATTTTAACAAACTCAAAGTCCAATGGGATAATGGTAAATGTCTTTTAAAAACACCGTTTCCATCATTTGAATCATATTTTATGATTGAATCTTCAAGTGAAGACGAAAATGATAAGTCTGTTCCTAAAGAAGTTCTTAATTTGATACCCAAAGATCCAAAACTATTGGCTATGGCTAATTTGGGGTTTAATTATTATTTTGAAAATAATAAGGAAATAATTGATAAACATTGGAAATTATGTGAAAATGAACATCAAAAGATGTTAAAAAATTGTATAGCTCAAGCCGACAAGATTGATAAAAAATTTAAAAATTTAGAAACAGAATTTGAATCAGTAAAAACCTCCATATATGCGCCATATAGACCAACAACTGAGGTCATAGAGGTCTTCCATGTTCAAGAATCCAATAAGAAAGTTGATAACAATGTAAACGTGATGAGTGGTATGACACATAATGAAGAAAATAGAATAGAAAAAGACAATATTGTTGATTCTCTTAATAGTATAAAGATCTCCAATAAACCAGATGGTCTACCTAATAAGGGGCCTTTAGAATATTCCGATTTACGAGTTGGACAACAAATGTTTGGAAAAAGACTTTCACTACTAGATCCATGGGATAAATGCAAAATTAAAGCTGTAATAAACACTGAATATTTGCACTTAAAGTTTGGCACTAATGAAATGATATTAATGACAAAAGAAGTAGCCTACTTTGATCCAAGTTCAGTACAATATCCTATAGGCTCCAGAGTTATTGCCAAGTTGTCTAAAAATGAAAAACCAAAATCTGAGTATTATGCTGGTGTAATAACTGAACCACCTGTTCAATTCAACAATTTTCGATATATGGTATTTTTTGACAATGGTGATGTTGGATATCGGCACCATGATGATATCCGTTTAATTGCAAACAAGTCTATAAATGTATTAAATGAAGTACATGATAATTTTAAAGAATTTTTACGTAGTTATTTGGGAAAATATCCGAAGCGTGAAATGGTTAGTTTAAGTAATAACCATTTAATAAGGGCCAAATTTAATCAACAATGGATGGTGGCTAAAACCATTGAAGTTGATGCATCAATAGTAAAATTATTCTTTATGGATGTGAACAAAAGTGAATGGTTATACCGGGGTTCTTCCAGAATATGGAGCATTTTTGAAAAACAAAATACATCTGAAAAAAGTATTTCTATAAAACAATCTGGACTAGTATGTTCGAAAAAAACTGTTGTTAAAAACTCAAATGTAGACAATTCAGAGAGAGTAAAATATTTAGAAACTGTAAAAAAACCCGAAATTGTAAAACATGCTGAAAAAGAAATTACTAAAACTATTGTACCTCATAGAAGTGTAGCTCGTAAAAGTACTAGCAAGAAAACTAAGAACACAGTACCTATAAATACAAATATAAATGAAAAAGAATCTTTCTTATTTAAGATCAATTACAGACAAGTACCTGATACAGCTCTTAAACCGAAAAAAATAACAAATCATGTCTGTAAACATTCTTGTGTAGCATGGACTGGATATGATTATAAGGAAACAAAAGAACTTAACATGTTAGCCATACCATTGCATTATGGTTTTGAAAGATATATTGCATATTTTAAAAATAGCAATTTCAATACTGTTTTATCAAGATGTGTTTTGTACAGAACGCCATGTGGTCGTATGATCCGAAGTATAAATGAAATGTGTATATATATTAATATGACGGACAGTGCTTTTACAATTGACCAGTTTGATTTCTGTAGCTGGGTGGAACCTCTGGCAGAATATGAAGCATTGAATTTTAAAAAATGTTTAGATGATTTATCTAATGGAAAAGAATTTAGGCCAATAACATGCATTAATTCTATAAATAATGAATTACCTCCCCCTATGGAGTATATGACCATGAGACAAGCTATGCCTGGCGTCAACATTAATGTTGACAGTGATTTCTTATGTGGATGCGATTGTACCGATAATTGTCAAGATAAAACCAAATGTGCATGTTGGGGTATTACGATTGAAGGTCAAAATGTTTTGCCCAACATCTTCAACGACCCAAATATCGGTTACAATTATCGAAGATTACCTGAACGTGTTCTGACCGGCATTTATGAATGTAATAAGACTTGCAAATGTAAATCTAGCTGTTTGAATCGTGTGGTACAACAACCATTATCACACAAATTACAATTGTTTATGACAGAAAAAAAAGGATGGGGTGTTAGATGCCTTAATGATATACCTCAGGGTAGTTTTATATGTGTTTACGTAGGATTTTTACTAACGGAAGCAGATGCAAATGAAGGTGGTAAAAATTATGGTGATGAATATTTAGCAGAGTTAGACTACATTGAAGTAGTTGAAAAAATAAAAGAAGATTATGAAAGTGAAGTACCCCCAGAAAGTTTAATTTTTACAAATAACAGTAGTGATAATAGTACAATTGATGAAGATTCTGAATCTAATGATGAAGAATATAGAGAAAGACCACCTGTGGCATCAGACATTTTATCGCGTTTGCGAAAACGCACAAAGAAGCCCAAACCTGAGAAAAAAAAATATCAACACGCTGACAAACTCGATAAAAAAAATAACTCAGTACCCAAAAAAACAATGCGGGAGTACTTTGGGAATAATGAAAGTGCTTTTATTATGGATGCAAAGACTAGTGGCAACATTGGACGGTACTTAAACCATTCATGTTCCCCAAATATTTTTGTTCAAAATGTATTTGTAGATACTCATGATATAAGGTTCCCGTGGGTGGCCTTCTTTGCATTACATTACATAAAAGCTGGAACAGAACTTACATGGGATTACAGTTATGAAGTAGGAAGTGTTCCAGGAAAAGTAATGATGTGCCAATGCCAATCGGTTCATTGTAGAGGAAGATTACTATAG
Protein Sequence: MASSNGSSNGSSTENAKGKKINNQRLQCVNRYCMHGDGLMKAYDFVCNYYHVRFTRTKEVCSTCFKNCLDHFNKLKVQWDNGKCLLKTPFPSFESYFMIESSSEDENDKSVPKEVLNLIPKDPKLLAMANLGFNYYFENNKEIIDKHWKLCENEHQKMLKNCIAQADKIDKKFKNLETEFESVKTSIYAPYRPTTEVIEVFHVQESNKKVDNNVNVMSGMTHNEENRIEKDNIVDSLNSIKISNKPDGLPNKGPLEYSDLRVGQQMFGKRLSLLDPWDKCKIKAVINTEYLHLKFGTNEMILMTKEVAYFDPSSVQYPIGSRVIAKLSKNEKPKSEYYAGVITEPPVQFNNFRYMVFFDNGDVGYRHHDDIRLIANKSINVLNEVHDNFKEFLRSYLGKYPKREMVSLSNNHLIRAKFNQQWMVAKTIEVDASIVKLFFMDVNKSEWLYRGSSRIWSIFEKQNTSEKSISIKQSGLVCSKKTVVKNSNVDNSERVKYLETVKKPEIVKHAEKEITKTIVPHRSVARKSTSKKTKNTVPINTNINEKESFLFKINYRQVPDTALKPKKITNHVCKHSCVAWTGYDYKETKELNMLAIPLHYGFERYIAYFKNSNFNTVLSRCVLYRTPCGRMIRSINEMCIYINMTDSAFTIDQFDFCSWVEPLAEYEALNFKKCLDDLSNGKEFRPITCINSINNELPPPMEYMTMRQAMPGVNINVDSDFLCGCDCTDNCQDKTKCACWGITIEGQNVLPNIFNDPNIGYNYRRLPERVLTGIYECNKTCKCKSSCLNRVVQQPLSHKLQLFMTEKKGWGVRCLNDIPQGSFICVYVGFLLTEADANEGGKNYGDEYLAELDYIEVVEKIKEDYESEVPPESLIFTNNSSDNSTIDEDSESNDEEYRERPPVASDILSRLRKRTKKPKPEKKKYQHADKLDKKNNSVPKKTMREYFGNNESAFIMDAKTSGNIGRYLNHSCSPNIFVQNVFVDTHDIRFPWVAFFALHYIKAGTELTWDYSYEVGSVPGKVMMCQCQSVHCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -