Cced001694.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- TFIP11
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010000953.1:1192741-1198716[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-77 1.1e-73 248.3 17.9 5 275 384 648 381 648 0.96 2 2 0.12 1.2e+03 -1.0 0.1 234 264 652 682 649 692 0.63
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAAATGGAAAAATTTGAAATCACAGACTATGATTTGGACAACGAGTTTAACATGCACAGGCCCCAAAAACGATTGACTAAACATCAAGCAATTTATGGAATTTGGGCTGACGAAGAAGATAGAAATGATATTGACGATGAACCTACAGGATTTGGAGGCCGTAGAAATAAAGAAAAAAAATATAAACAGAACTATACTGCTCCAGTTTCATTTGTATCCGGAGGTATTCAACAACCTGATAAAAACAAAAAAGAGATTAAAACTAAAGAAAAAAATTCCGAACCCGAAAATTTAGATGACAACATATCTAGTGAAGATGAAAAACCCATGTTCAATTATGATATTGATCAAGAACTGGCAGGTTTACGAAAAAAACAATCTAATGTTAATCCAAGACTTATGAATAAAGGATTGGGAGATTGGGAAAAACATACAAAAGGAATCGGTGCAAAATTATTGCTTGGAATGGGTTACCAACCTGGTCATGGTTTAGGAAAGAAATTACAGGGCATTACAGCCCCAATTGAAGCAAATTTAAGAAAAGGAAGAGGAGCAATTGGTGCATATGGTCCTGAATCTAAAAGCAAACCAATGAAAATAGATGGTGAACGTACATTAGAGAAGACAAAAGATAATAAAGTTTCTCATGGGTGGAGAAAAGCCTTAAAAGCCGAAAAAATGCAATATATTTATAAAACAGTTGAGGATGTAATTGAAGAAAGCAAACATCCTGGACAAAGAAAAAGAGAATTCAATGAATTAAGTCGAGTTAAAGTAATTGACATGACTGGTCCAGAACAAAGGATATTATCTGGATATCATGCAATATCTGGTGTTAAAAAACCAATTGATCAATGGGAAGTACGAAAAGATAAAAAATTTTTAAATTTTGATCTACCTGAAATGATACACAATCTCAATCTTTTAGTTGAAATAGCTGAGCAGAATATTATAACAAATAATCAAGAACTTTGTAATTATGAAGATCGTTTAATTGCCATTGAACGTGAATCTATTAAGTTAGAAGAAAGTATAAAAGAAAAAGATAAATCAATTGAATCTCTTGAAAAAATTATGGGTACTATGAAAATGTTGAATGATGCATTGAAAAATAATGTGTTAGATAGTAATGAAGCTATAAAATGTTTAACAGAAATGAAAAACAATTATTACGCGGAATATCGACTAAATGGTGGATCAGTTTTAGCATTATTAATTTCACAAAAATTGATTAAAGAAAAACTATCAACGTGGGATCCATTACAAGATCCAACAATGCCTTTTGAAGAACTCAATAAGTGGAAACAACTATTAACATTAAATGATTCATATGTTATTGGTTTTCAATCTAGTGATGAATTCCAAACATTAATATGGCAAGAATGGATACCTCAAGTACAAAAAGCATGCGGGCGGTGGGAATGTCGAAATTATAACAGTATGTTGAAACTTGTTGAACAATCAGCTAAATTGATACCAAATGAAATTATTAATACAGTTCTTGAGAATATGATTTTACCGAAAATTCAATTGGAAGTGGAACAATGGGATCCATTAACTGATCTTGTTCCAATTCATTTGTGGATTCATCCGTGGTTACCATATTTAAGTCAATATTTTGAAACAACTGTCTATCCAACTTTAAGACAAAAATTAAGTGTAGCACTAAATGCTTGGCATCCATCTGACAATTCTGCTAAATTGATGCTCCAACCATGGATAAATGTTTTTCAGAAAGGCTACATGGATGCTTTTCTAATTAAAAATATTATTCCTAAATTACAAGGTGCTCTAGATGCTTTTATAATCAACCCACATCATCAACAGTTAGAAAACTGGAATTGGGTGATTGCATGGTCAGATTTATTACCATTGCCCACACTAGTGGACTTACTGGACCAACACTTTTTCCCAAAATGGCTTAAAACACTTACAATGTGGATAAATATGAACCCTAATCATGAACAAATTGGTAACTGGTATACGGGATGGAAGTCTTTAATGCCTCCTATTATTATTGAACATCCAACAATTAAAAATCGGTTTCATTCTGCTTTGGAAATAATGAGCCGTGCAGTTGGAGGGCCTTCTATTCCACTACCGCCTCCACCTACAATTCATGGTGGTCTAGCTGAAGCTGTACGTACTGCTACACAGATGCCTCATGGTTTTAAAGAATTAGTGCAAAAGCGTTGTGAAGAACGTGGAATTTTGTGGATGCCTCTTTCTGGTCGATTTAGAGAAGCTAAACAAGTATACAGATGTGGAGCTAGGCTTCAAGCATATATAGATCGTGGAGTTCTATTTGTTAGCCATGATGGTGCACATTTTGCCCCTATGTCTGTTCAGTCAATGTTAGAACTATGTCGATAA
- Protein Sequence
- MSDDEMEKFEITDYDLDNEFNMHRPQKRLTKHQAIYGIWADEEDRNDIDDEPTGFGGRRNKEKKYKQNYTAPVSFVSGGIQQPDKNKKEIKTKEKNSEPENLDDNISSEDEKPMFNYDIDQELAGLRKKQSNVNPRLMNKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGITAPIEANLRKGRGAIGAYGPESKSKPMKIDGERTLEKTKDNKVSHGWRKALKAEKMQYIYKTVEDVIEESKHPGQRKREFNELSRVKVIDMTGPEQRILSGYHAISGVKKPIDQWEVRKDKKFLNFDLPEMIHNLNLLVEIAEQNIITNNQELCNYEDRLIAIERESIKLEESIKEKDKSIESLEKIMGTMKMLNDALKNNVLDSNEAIKCLTEMKNNYYAEYRLNGGSVLALLISQKLIKEKLSTWDPLQDPTMPFEELNKWKQLLTLNDSYVIGFQSSDEFQTLIWQEWIPQVQKACGRWECRNYNSMLKLVEQSAKLIPNEIINTVLENMILPKIQLEVEQWDPLTDLVPIHLWIHPWLPYLSQYFETTVYPTLRQKLSVALNAWHPSDNSAKLMLQPWINVFQKGYMDAFLIKNIIPKLQGALDAFIINPHHQQLENWNWVIAWSDLLPLPTLVDLLDQHFFPKWLKTLTMWINMNPNHEQIGNWYTGWKSLMPPIIIEHPTIKNRFHSALEIMSRAVGGPSIPLPPPPTIHGGLAEAVRTATQMPHGFKELVQKRCEERGILWMPLSGRFREAKQVYRCGARLQAYIDRGVLFVSHDGAHFAPMSVQSMLELCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169838; iTF_01499640;
- 90% Identity
- -
- 80% Identity
- -