Cced008969.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- AFF1
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010000012.1:508859-614895[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 9.9e-13 1.9e-08 34.1 24.7 4 248 32 278 30 297 0.55 2 7 0.0033 65 2.7 0.9 325 363 263 300 258 395 0.80 3 7 0.015 3e+02 0.5 30.8 408 514 418 527 381 527 0.59 4 7 0.88 1.7e+04 -5.3 28.8 421 477 568 625 532 637 0.61 5 7 1 2e+04 -5.8 22.0 370 500 660 785 657 792 0.57 6 7 0.0032 63 2.7 2.8 155 214 947 1001 907 1047 0.54 7 7 1 2e+04 -8.1 4.2 207 219 1318 1330 1299 1346 0.44
Sequence Information
- Coding Sequence
- ATGAATTACCGGCCGAAACCCAATCCGTTCGAAAGCCTGAGGAACTCGCCGTCGTCGCACAACCGCGGCGGACTCGGCTACATGACTACAATGGAACGGGAAAAACAACGGGAGAAAGAAAGGCAGTCCAGACAGCAACAAGTACAATCCGAGAACAACGTCAAAGACAAGAAAGAGCTGTTCGGTTCGCCGGTAAAGGTGGACGACGCGAACGACGATGAACAGAGCCAGCTGATCCAAAGCCAGTTGGGTTCGTTCGATGACGCCAAACCGTTCTTGGACCTGGTGTTCAGTTGCGGCATGACCGGCATGCCGCCGAGTCCCGCACCGCCGCCTCCGCAATCGTCGTCATCCTCGTCGTCCGCCGCCGCATCCGGTATGATGCACCTCCATTCGTCGTCATACGCCTCCTCGGCAGCGGCCGCCGCAGCCGCGGCCGCCAAATCGCACCATCACGCCGCGGCCGCCGGCCAGCAACAGTCGTCCAGACGATCGGAATCGCCCGCGTCCGGATCCGTGCCCGCGGCCGTCGCCTCCTTCAAAAAACCCACGGTGACGTCGCACGCCATGGCCAGATCGTCGTCCGGCGGCGGATCCTCGTCGTCCGCGTCGCACTTTCAGTCGCCCGTCAATCCTCCGAGGAACAGTAATTTTCTGAAACCCGGTGAAATGAAACCGCCTTCGTACTCGTCGATGGGCCGATCGACAAGTGGCGGCGGAAGTAGCAGCAGTAGCATGAGAAGTAGTCATTCATCGCATCACAGGGCCCCACACAAGCCCAACAACAATCTCGCCGTATCGAATGTAAAGAACAATAATCACAATTCCAATAATGATACCAATACGCCCAGCACTATCGAAGACATATTGAACGAAATGACCGTAGGCCTTCCGCTCGTGTCCGACATCGCGGAAACGCCGAGGGTCACGATCGTTGACTCCAAGTACACAGCCGACGGAAAAGTGGAACCCCAGCAAAGGATGAGCCCCAAAGACGCTTCGGAGAGCCTGAAAAAAATGCTCGGCGAACCCAAACCGCTGTTCGCGGAGCCCGTGCAGCACCGGAGCGGCGGCGGCGGCGGCGGCAACCAGCACCAACAACAGCCGTCGTCTCGCGGAGTGTCTCCGGACGCCGCGTCGTCCGCCGCGGCCGCGGCCGCGTCCATGGACGCCAAACCGTCCGGACCGTACAACCATTCGCTGTTCGCCTCGTACATGGTCAAGCCGTCCGTCAGAGGGTCCAACATAATGCCGCAACCGCAACAGTCGATGATGCAGGAATCGCAACAACAATCGTCGCCTTCGGCCGACAAGATGCGCCGTAGTTCCACGTCGGCCAACCTCGTGCCGTCGGATCCCGCAACCACCCCCGTCAAAATCGAAAATGCCGGCAGCGAAATGTCCGTGGACGAGGACAGTTCGTCCAGCGAGGAAGGCGAGAAGGACAGCAGTTCCGACAGCAGTTGCAGCGACAGCGAGAGCAACGACGAGACCAACAAGAAAGACGAACAGCCGGCCGCGATGTCGCCTCCCCAGCAAGAGGAAGAACAGCCCAGGTGGAATCTGAAGAACTTCTTGAAAAGGAGCACGCCGGACACCAACAACGCGACCAGGGCGCCTCAACAGGATGAATCTATCGGGATGACCGATCCCAAATCTAGTCCAGGTTTTCTTCAAACTCAACGGTCTGAAGTCAATGAAATATCCGAAATGTCAGACGATTCGGACTCGAACCATAGTGATAAGCAAAAGAGTCAATCAGATTCGTCATCGTCTTCGTCCACCTCGTCATCGTCTTCCGAAGACGAAGACGATAAAAAGAAAAAGAACAGCGAGAGTAGTTGCGACAGTGATTCATCTTGCAGTAGCCGTTCGCGTGCATCTGCTAAACCAGTAACGGACTTGCACCAAAAGTACTCAACGTTAGCCAAATACGAAAAAAAGGATATCAAGAAATCATTCGAAAAGCCTGCCAAACCGACGGAAAAGAAACAGTCGACGCCGGTGATTCCAAAAAAAGAGGAACCGGTCGACGAACCTTTAAAGAAAAGGAGAGGCCGAAAGAAAGGTTCGACAAATACGCCAAAACCACCTCCACCGTCTAAAATTAAGTCGAAACCGTTGATTTCGTCCGATTCCGAAGACGACGAGGAACCCGCGCCTAAACCGAAGATAAACGAAAAGCGAAGAGGGCGACCGCCCGGTAAGAAAACCGCCAAAGTTATATCGGCTAGTAGTGAATCCGAAGAATGGACCGACAGTAGTCGAAAGAGCCGCAAGAAAGATTCGGAAAAAAAATCGTCGTCTCATCATTCGGTGAAGAAAACGCCTTCGTGGGAAAAGAACCCACCGCAAAAGCCTGTGGCTCGCGTCAGTGCTGCTCTACGCCCGCCCCGTTCGGTTTCGAGCAGCGTCGACTCGGATTCATCGGACGTCGAATGTAGACCACCGCCCATATCTACGGCCACTGAAAGTCCGCCCAAACTTGACGTTGAAGGGATTAAAGTGCAGGACAAAAAGAAAAACGACACCTTAAGGAAACTTTTCAGGACACGTCGTGAGGAAGGCGTCAAAATTGGTGGAAAATCCAAAGGTGGTAAAGGCGGTAAAGGTGGTGTTATCATAATTGATAACAACGAAGCGATGCGCAACGATAACGAACGAGTTATTTCTCCCGTACCCGTCATACCGCCCATGGCCAAAGAACCCGAAGGTCCAAAGAGTTTGTCGATGATGTCGATACCGTGCAGCATACCGTTGAGCAAGTTGCCTAATTTAAATTATTTGCTAAAGTCGGTGAGATCCAAAGAGCTGAGAACCTGTGCTGACTTGGCAAACACTAGGCAAACGGAGGAAAAGAAACCGAAACATAGACACCATAAACACCATCACAAAGGCAGTCCGGCACAGTCAGTTTCGGGATCGGAAAAGTCCAAAGCCAATAACGAATCTCAAGCAAACACTGTTCCACCTACACAACCCCTTCTTCAACAGCCTTCGTCCGACGGTTATACTAAAGGCATGATGGACAACGTGAACGTTTGGCGCAAGCCGACGTCAGTGTGCGCAGTCATCCCCGAAGCCAAAGTGAAACCTTTAGAGCACAATACCATGTCGTACCTGCAACGCCCGTCCACCGGCAGCGGATTAATGCACCCGCCCTACGAGGATTCGTCCGAAGACGAAGACGGAACAGCACCTTTCCTCGGCTATGGTCCCACTGCTGTCCAAATAATGGATCCCCGGTATAAACGTTCGCTGGAACTGGACCAATATCCCCCTCCTAACGCCACTAAAAGAAGAAAGTTCCACAATCCGCCGGGGCCCGCGACTCTTGGAAGATACGGCACAGCGATGGGTGATGGTTTAATAAACGACATCTTTGTGGATCATGAAGTTCCCATTCAACCTCCTCCCAGACAACCGTCCTGGCGCATGCAATCCATGCATCACCAATATCCTCCACGAAAACGATTCTTTTCATACTTTGTCACCGACTTGTACCCTGAAAACAACAGTATGCACCAAGAAGTTCCGTTGAAGGAGGCACAAGCATTGACCAAATTGGCAGAGTATGAGCCTGATCCTATTACCCAAGAAATGAAATATTTGGACGGTATACTGTGTTTTGTACTTAGTGGCTATCTGATGGAAAATGACGGTACCAGAGAAAGAGCAGTGCTGAAGATCTACAACGATACCATTGATTTGATTAAAGTTATTTGGTCTAAAATTTACAATTACCGTGCAGACTGTGATCACGAAGAATTAGAGGAAATATTCGAAATGGCAAATAATCCAGAGAGGGATAATAGGCTTTTAATTCTTTGGATGAGATGTCTGAGTTTTTTGCGGTTGAAATTATATAGATTACTCACGTACCAACATAGACCAAGTTTCAAGACTGTTCAGCAACATTTCCTCAAAAATGTGGGTTCAAGTCCCATTTCACCATCCCCATCGCCGGCCAGTTCAGTGGAAAGTCATTCATCTGGATACTGCAGTAGTAGCATCACGCCCAGTGGTGTGGCCGCCTCTTCGGGCCCTCCAACAGGTGTAATCGGCGTTCCAGTAGCAGCACACACTGCTTTACATTCAGAACACATACTGTTTTGTCATCTTGCAGCGGCGCATGAGATGTGGTATCGTGCTGACATGCTGGTTATGCGCGGGAAACATACACAATTCTTTGTCGAAATGGACCGACATTGTGGTCCTCTAACACTACACAGCACTGGCTATGATCTCACACTTTACGCTCGCATTGCAATTTCCCGCATGAGATGTGAGTTTAATATCAAAAATTACCTTCCATGA
- Protein Sequence
- MNYRPKPNPFESLRNSPSSHNRGGLGYMTTMEREKQREKERQSRQQQVQSENNVKDKKELFGSPVKVDDANDDEQSQLIQSQLGSFDDAKPFLDLVFSCGMTGMPPSPAPPPPQSSSSSSSAAASGMMHLHSSSYASSAAAAAAAAAKSHHHAAAAGQQQSSRRSESPASGSVPAAVASFKKPTVTSHAMARSSSGGGSSSSASHFQSPVNPPRNSNFLKPGEMKPPSYSSMGRSTSGGGSSSSSMRSSHSSHHRAPHKPNNNLAVSNVKNNNHNSNNDTNTPSTIEDILNEMTVGLPLVSDIAETPRVTIVDSKYTADGKVEPQQRMSPKDASESLKKMLGEPKPLFAEPVQHRSGGGGGGNQHQQQPSSRGVSPDAASSAAAAAASMDAKPSGPYNHSLFASYMVKPSVRGSNIMPQPQQSMMQESQQQSSPSADKMRRSSTSANLVPSDPATTPVKIENAGSEMSVDEDSSSSEEGEKDSSSDSSCSDSESNDETNKKDEQPAAMSPPQQEEEQPRWNLKNFLKRSTPDTNNATRAPQQDESIGMTDPKSSPGFLQTQRSEVNEISEMSDDSDSNHSDKQKSQSDSSSSSSTSSSSSEDEDDKKKKNSESSCDSDSSCSSRSRASAKPVTDLHQKYSTLAKYEKKDIKKSFEKPAKPTEKKQSTPVIPKKEEPVDEPLKKRRGRKKGSTNTPKPPPPSKIKSKPLISSDSEDDEEPAPKPKINEKRRGRPPGKKTAKVISASSESEEWTDSSRKSRKKDSEKKSSSHHSVKKTPSWEKNPPQKPVARVSAALRPPRSVSSSVDSDSSDVECRPPPISTATESPPKLDVEGIKVQDKKKNDTLRKLFRTRREEGVKIGGKSKGGKGGKGGVIIIDNNEAMRNDNERVISPVPVIPPMAKEPEGPKSLSMMSIPCSIPLSKLPNLNYLLKSVRSKELRTCADLANTRQTEEKKPKHRHHKHHHKGSPAQSVSGSEKSKANNESQANTVPPTQPLLQQPSSDGYTKGMMDNVNVWRKPTSVCAVIPEAKVKPLEHNTMSYLQRPSTGSGLMHPPYEDSSEDEDGTAPFLGYGPTAVQIMDPRYKRSLELDQYPPPNATKRRKFHNPPGPATLGRYGTAMGDGLINDIFVDHEVPIQPPPRQPSWRMQSMHHQYPPRKRFFSYFVTDLYPENNSMHQEVPLKEAQALTKLAEYEPDPITQEMKYLDGILCFVLSGYLMENDGTRERAVLKIYNDTIDLIKVIWSKIYNYRADCDHEELEEIFEMANNPERDNRLLILWMRCLSFLRLKLYRLLTYQHRPSFKTVQQHFLKNVGSSPISPSPSPASSVESHSSGYCSSSITPSGVAASSGPPTGVIGVPVAAHTALHSEHILFCHLAAAHEMWYRADMLVMRGKHTQFFVEMDRHCGPLTLHSTGYDLTLYARIAISRMRCEFNIKNYLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -