Cced005177.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- dl
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001430.1:22351-33727[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-39 2e-35 122.4 0.3 1 167 53 224 53 226 0.89 2 2 1.9e-42 1.9e-38 132.2 0.1 1 167 259 428 259 429 0.94
Sequence Information
- Coding Sequence
- ATGGATCCGTACGACAATAATCATTCGGACATCGACGACAACCGTCTTGATGCAAAAGTTTGCGACAAGATTGGAATAGATCTAATCAAAAACGACACTGTCAGTCCGTCGCCACCTGCATCTAGTGACGCAAAACTAACAAAAACTAACGCGTTCGTTAAAATAATCGAACAACCCACTGCTGTGATTTCGGCAGGGTTTCAACAGTCGCAGAGAACCGCGAAAATTTCAATATGCGGAGTTCACAGTACTTCCGAGCACAAAACCTATCCAACAATTCGGTTATTTGGTTCCGGAGGCAGGGCTGCTGTCGTCGTGGTGTCCTGCGTCACCAAATCCAGACCATTTCGCCCGCATCCGCATAACGTTGTGGGCCGAGAAAACTGTAAGAGAGGAATTCGCACTGTCCTGATGGATAGCGAATCGACGACAGAAAGTTTTCAAAATTTGGAAATACGGCAGTGCGCTAGCAGAGAAGAGGACATACGCGACGCTCTCAAAGTACGAGAAGCCATACGAGTGGATCCGTTTAGAACTGGATTTTCGCATAGAGATTATTCTGCAACATCAATCGATCTCGACACGTTTCGGTTGTGTTTTCAAGTATTCTTAAGAAGTTCGACAAATGGGAAATTCATTACGCTCGAACCGGTGGTTTCCGATGTTATTTGCATCAATAACACGAACTGCTATGTACCGAAAAGGCATACCGCAAAGATGTTCGATTGTCCATCATCGTCGAGCGATGACCAGAAATTTACAAAAAAGCCGTACATCGAAATACTCGAACAACCAGCAGCTATTCATTCGGATCGTTTATACGCGCGCGAAAGTGTATCCGCTGTAAAAATAGTCGGAGTTCATAGCACTGCCGAAAACCAAACATATCCAACAATTCGGTTGGTGGGTTCCGGAAGTAAGGCCGTCGTCGTGGTGTCCTGTGTAACCAAATCCAGACCGTTCCGCCCACATCCACACAATGTCGTGGGTCGGGAAAACTGCAAGAAAGGCGTTTGTACCATTGTAATTGATAACGAATCGATGGCCCAGAGTTTCCGGCATTTGGAAATACTGCAGTGTGCAAAACGCGAAGACATTTACGATGCGCTCAAAATACGAGAAGAGATTCGAGTGGACCCGTTTAGAACTGGATTTTCCCACGGAAATAATCCAACTACGATTATTAATCTTAATGAGTTCAGGTTATGTTTCCAAGGATTTTTGAAAATTCCAAATGAGGGAAAATTCGTTGCACTCACACCGGTCGTTTCTGATCCTATTTATTATTAA
- Protein Sequence
- MDPYDNNHSDIDDNRLDAKVCDKIGIDLIKNDTVSPSPPASSDAKLTKTNAFVKIIEQPTAVISAGFQQSQRTAKISICGVHSTSEHKTYPTIRLFGSGGRAAVVVVSCVTKSRPFRPHPHNVVGRENCKRGIRTVLMDSESTTESFQNLEIRQCASREEDIRDALKVREAIRVDPFRTGFSHRDYSATSIDLDTFRLCFQVFLRSSTNGKFITLEPVVSDVICINNTNCYVPKRHTAKMFDCPSSSSDDQKFTKKPYIEILEQPAAIHSDRLYARESVSAVKIVGVHSTAENQTYPTIRLVGSGSKAVVVVSCVTKSRPFRPHPHNVVGRENCKKGVCTIVIDNESMAQSFRHLEILQCAKREDIYDALKIREEIRVDPFRTGFSHGNNPTTIINLNEFRLCFQGFLKIPNEGKFVALTPVVSDPIYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -