Basic Information

Gene Symbol
lilli
Assembly
GCA_000648675.3
Location
NW:649680-759465[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 7.2e-16 8.2e-12 44.5 0.6 4 155 12 167 10 188 0.66
2 6 1.5e-06 0.017 13.8 0.1 346 388 219 262 155 286 0.72
3 6 0.016 1.8e+02 0.4 20.8 389 491 329 438 301 462 0.54
4 6 0.24 2.8e+03 -3.5 14.0 116 237 468 586 442 616 0.58
5 6 1 1.1e+04 -9.0 17.6 89 217 613 724 591 768 0.32
6 6 1 1.1e+04 -5.7 21.0 107 241 877 1008 851 1080 0.49

Sequence Information

Coding Sequence
atgtataattcaaaattaagtttattaagCGTGGAGCGGGACCGGCTTCGAGAGCGGGAGCGTCAGGCAAGGGCTCAGATGTCCTCGGCCTCTGAACGTGGGGACCCTCCATCCGGCACCCCACTTTTCGGTGCCCCAGTCCGGgtTCACCCATCACCAGGGGACCGTGTAAAACAGAACATTCAAAGTACGCTTGGGGAGTATGACAAAGTAAAGCACCTCCTTGAAGAACCTATACAATTATTGGGTTATGATGGAGTACCTCCAGCTTCACCAGCTCCAGCTCCACTATGCAGTAGTAAGCCTTCCCAACCTCGGCCTCACGAATTCAAGAAACCGCCATCCTCTCATCTGGGTTCAAGTTCTAGACCCCCGCATcacatttcttcttcttcaactGCCAGGAATTCATTTGCAAAACCCGCTGATGGCAAACCTACATATGGCAGCAGTAGTTCTTCAGTTAGGAACTATTATGGGCAACCACAAGCCAAACAACATGCAGTTGAGTTTAGATCCAACGGAGTTGGAGGAGCTCCAAAAAATGTGCCTTCTGTGCATCATGGACGAATTCCATCTAGAAATCCTAATAGGCTTCATGTGGATATTcctCCACAAAATAAGGATATCTCTAGACAAGGATTAGGCCTTCCACACAATGATGTTGAAAATATTCTTAAGGAAATGACTGAATTCAATGTTATGCCTCTGACTGCAATAGCCTCAACTCCTCGCAAAGAAGTAgattcaaaatacaattttaatatcgACTTCTACCAACAGgaTCAGCACCAAGAACAAGCCAAACCTCCAGTTCAAACCATTGACATAACTCAACCCGTTACAATAAGTCTCTTGTCTCCACCGAGACCAGAATCTCCACCTCCACAGCCTTTGTCACCTCCTCCAGCTACACCTTGCCCTGTCAAGATCTATAAACCACCAAGTGGGGGACAAAGGAATAGCCATGGAAGCAGGCCCATCAAGGGCAATCAATCCTCCCAGCAGTCAACGGCAGTACCTTCGGCATCTTCATATCCTGTCATAAGCACGACGTCGAAtgACTTAGTTCATGATTTGAGTATATCAGAAGACAGTGATGAAGATACGAAAtcAGTTACTACATCACAACAACCTGAGGTTAAACAAAGCCCAGGATATCCTGCAATGGATAAGTCTGCAATGTTATCACCAGCTGTAAGTGTTGTACCTGAGCCTTTAGGGCCAATGTCTGCTTCCCCGCCTGGTGGGAGTTCTTCTAGTGATGATTCCGGCTCAGACAGTTCTGAATCAGATTCTAGTGCATCCAATACTGGTGGGCAAGATCTTGTGACTCCGATTCAAGAACAACGCCAGCCCTGCTGGGCTTTGAAGTCATTCTTACCGGCTCCGGCCAATCCTGAGCGCAAGACCACTCCAgAGCCACCAATAACAGAAAAGCCAAAGGTTGAAGAAGATTCAGAAATTGATATATCAGGTGTTACTAAGGCCCATCCTCTTTTGTCAAGTCTTTCTGATAGTGATTCAGAAAGAAAGGGGAAGAAAAAAGGCACCGAGAGACCCAAAAAGCGTAAAAGGGCGAATAAATTACCAGTTCTTTCTGACAGCGAAGATGAAAGTACACAAACAGCTTCAGTTGCAGAGCCCATTCCCGGACCAGAAACAAGGTTACCAACTCCTCATTCGACTACTTCTCCACGGATGCATCCAAAAACTCAGTCTGAAAGTGAAAGTGAGACGAAATCAAGACCGAAGAGAGAAGTCGCATTTCGTCGCAAGTGTAAACCCATTCCTGCTTCACCGAACCGAGTATCTTCATCTGAAAAGGGTAGAAAGAAGGCATCACAAATACCTAAGACACCTGAGAAGGAAACGAAGAAACAAAGTCGAAAAAGGTCGATCAAACCTCCTTATCCCCTCTCAGACACTGATGATGAATGGGTCAAAAGAAAACGAGTTTCTAGTTTGTCTGAATCAGACGATGAAGCTTGGAGTATAACTCCCACTGTCCGACGGCGAAGTAGTCGACGTTCAGTTAAGAGTAACTCAAGTGATCACAACCGCCGAGAGGTTTCTTGGAGTGCAAAACATTCAAGTAGCGATGATGAAAGACCCCCTCCTGTTCAGTCACCCGTCAAACCTGTCTCTAGGGTGCCTCCAGCTCCTGGAAAAAGGCCACAAGTTCTCAGTGAAAGTGACggggaaaaagaagaaagcccACCAAAACTAGACTCTGACGGACAATCCATTCAGGATAAGAAAAAGAACGACACTCTTCGCAAGTTGTTTTCAAAGAGAGACAACGAAGGTGGCGGTGGGAAAGGTGGGGGAAAATCAGGTGGTAAAGGAAAAGGAGGAAAAGCTGGCGTTATAGTGATAGATTGTAGCCCTGCAAGAAATCCAGTCCAACCTTCACCAAAACCTGAAAGTCCTCCAAGAGTTCCTTCACCCTCTCATGATGTAATTATTGAACCACCTGAACCAGATGTAAAGATCCCTCCTGTATGCTACATTGGAGGGAAACCGAGTGTTAAGTGTGTCATTCTATTAAATAGACTGTCATTCATACCATCTAAATCTAAATCAGAAGAAGTGAGGACCAGAACAGAGCTTGCAGACACAAGGCAAACTAAACGTTTAAATGAAGAGAAACCAACAGTGGCCGTTAGTGaggaaagtagaaaaattaaaaaagaaaagaaagagcgGAGGAGCAATAACAAGCCTCcaaaacctgaaaaaataaagaaagatagaaaagatTCTCCTCCAGTAGAATCTAAGGACGACGAAATAAAAGTACATCAagctgaaataataaaaagactcactcctgagataaaaaatgaagcaGACCCTTCTTGCAGCTCAACAAATGTCGGAGTAAACAGAGAGAGGGGAAACAGTTCTAGTTCCACCTCAAGTCATAACAGCTCAATGAGACATTCTTCGAAAAATTCTactaagaaaaagaaacatggGGAAAGGCCATCAGCAAGGtgTGAAGGTAGCTTAACCGATGCTCCGCCGACAAACCATGaacgggaaaaagaaaaggacaaTTCCCTTTTTGATagagataaaattaaagaaaaaaataaagaaatacctAAACATCAATATTTCTCATATTTTGAACAAACAGAGGATCATGATTTATCGGATACTGATGAcaaaGACCAGTATTTAAATGAAGCAAAAAGACTTAAAAATGGAgcagacaaagaaaaagaactaACTGCACAATGTCTGCAATATTTGGAAGCAAGCTTATACTTCCTCTTAACCGGAAATAGCATGGAACTTGATAGCAGTACAGAAAAAGCAGCTGCGACAATGTACAAAGATACTTTACATTTAATCAAcTATATCACGACAAAAATTCCATACCAGCAAAGTAATTCtacttttcaagaaaatattaatagcaAATTGGTTGTTTTGAGtcTGAGGTGCCAGTCATTGCTGTACTTAAAGTTGTTTAAGTTGCGTAAATTAGAAGTGAAAGAATGTCAACGAATTATTGGCGATTACATGCAGAAGgCCAGTCCTCCCACAACTGTAGAACAGTGTGGTTCAATGGTGCAAGGTCAAGGGACCCCTTCTCCGCTTTCCCCAACTCCTTCACCAGCTGGAAGTGTTGGTTCAGTTGGATCGCAATCTTCAGGATACAGCAGTGGTGAATTAAGAGGTGGCTCTTCTACACAGCCACAGCCTCACCCGCCCATAGCTCCTTGTGGCCCATGTATGGCAGTGCCTCTACAAATCCACGCTGcacttcaaaaacaaaatgctACATTTCAATCATTAATAACATCGTACGATTTATGGGATCAAGCAGATGCACTTATCTACAAGGGTAGACACAAGGaatTCTTCATTGAACTGGACCGTACTTGTGGACCATTGACCTTTCATAGCTCTATTAAAGATTTGGTAAAGTATGTGAAGGTCGGCATAAGTCGATTACAAGAATTAAGAAATGAATCTATGTGA
Protein Sequence
MYNSKLSLLSVERDRLRERERQARAQMSSASERGDPPSGTPLFGAPVRVHPSPGDRVKQNIQSTLGEYDKVKHLLEEPIQLLGYDGVPPASPAPAPLCSSKPSQPRPHEFKKPPSSHLGSSSRPPHHISSSSTARNSFAKPADGKPTYGSSSSSVRNYYGQPQAKQHAVEFRSNGVGGAPKNVPSVHHGRIPSRNPNRLHVDIPPQNKDISRQGLGLPHNDVENILKEMTEFNVMPLTAIASTPRKEVDSKYNFNIDFYQQDQHQEQAKPPVQTIDITQPVTISLLSPPRPESPPPQPLSPPPATPCPVKIYKPPSGGQRNSHGSRPIKGNQSSQQSTAVPSASSYPVISTTSNDLVHDLSISEDSDEDTKSVTTSQQPEVKQSPGYPAMDKSAMLSPAVSVVPEPLGPMSASPPGGSSSSDDSGSDSSESDSSASNTGGQDLVTPIQEQRQPCWALKSFLPAPANPERKTTPEPPITEKPKVEEDSEIDISGVTKAHPLLSSLSDSDSERKGKKKGTERPKKRKRANKLPVLSDSEDESTQTASVAEPIPGPETRLPTPHSTTSPRMHPKTQSESESETKSRPKREVAFRRKCKPIPASPNRVSSSEKGRKKASQIPKTPEKETKKQSRKRSIKPPYPLSDTDDEWVKRKRVSSLSESDDEAWSITPTVRRRSSRRSVKSNSSDHNRREVSWSAKHSSSDDERPPPVQSPVKPVSRVPPAPGKRPQVLSESDGEKEESPPKLDSDGQSIQDKKKNDTLRKLFSKRDNEGGGGKGGGKSGGKGKGGKAGVIVIDCSPARNPVQPSPKPESPPRVPSPSHDVIIEPPEPDVKIPPVCYIGGKPSVKCVILLNRLSFIPSKSKSEEVRTRTELADTRQTKRLNEEKPTVAVSEESRKIKKEKKERRSNNKPPKPEKIKKDRKDSPPVESKDDEIKVHQAEIIKRLTPEIKNEADPSCSSTNVGVNRERGNSSSSTSSHNSSMRHSSKNSTKKKKHGERPSARCEGSLTDAPPTNHEREKEKDNSLFDRDKIKEKNKEIPKHQYFSYFEQTEDHDLSDTDDKDQYLNEAKRLKNGADKEKELTAQCLQYLEASLYFLLTGNSMELDSSTEKAAATMYKDTLHLINYITTKIPYQQSNSTFQENINSKLVVLSLRCQSLLYLKLFKLRKLEVKECQRIIGDYMQKASPPTTVEQCGSMVQGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELRGGSSTQPQPHPPIAPCGPCMAVPLQIHAALQKQNATFQSLITSYDLWDQADALIYKGRHKEFFIELDRTCGPLTFHSSIKDLVKYVKVGISRLQELRNESM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-