Cfus012994.1
Basic Information
- Insect
- Chymomyza fuscimana
- Gene Symbol
- nfxl1
- Assembly
- GCA_949987675.1
- Location
- OX465089.1:44683037-44686294[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.5 2e+04 -3.7 2.1 15 19 154 158 153 158 0.82 2 19 0.1 1.4e+03 -0.0 0.2 4 10 189 195 188 197 0.94 3 19 4.4e-08 0.00058 20.3 16.1 1 18 203 219 203 220 0.98 4 19 0.31 4.1e+03 -1.5 1.5 5 10 245 250 245 250 0.95 5 19 1.2e-06 0.016 15.7 15.9 1 19 256 275 256 275 0.97 6 19 0.28 3.6e+03 -1.4 1.0 5 10 299 304 299 304 0.93 7 19 1.2e-09 1.6e-05 25.3 14.0 1 19 310 328 310 328 0.99 8 19 2 2.6e+04 -7.2 4.3 15 19 354 358 353 358 0.73 9 19 1e-06 0.014 16.0 12.4 1 18 363 380 363 381 0.97 10 19 0.64 8.5e+03 -2.5 0.5 1 5 390 394 390 399 0.71 11 19 0.019 2.6e+02 2.3 20.4 1 18 415 432 415 433 0.95 12 19 2.1e-07 0.0028 18.2 14.7 1 19 442 460 436 460 0.90 13 19 1.4e-05 0.18 12.4 7.8 10 19 506 515 503 515 0.91 14 19 0.031 4.1e+02 1.7 4.1 3 11 528 536 518 537 0.83 15 19 4.4e-05 0.58 10.8 4.5 1 12 600 611 600 611 0.97 16 19 2 2.6e+04 -5.1 4.0 5 10 626 631 624 631 0.88 17 19 0.0009 12 6.6 14.0 3 18 640 655 639 656 0.93 18 19 1.7 2.2e+04 -3.8 1.4 8 13 661 666 660 666 0.73 19 19 7.2e-06 0.095 13.3 14.8 1 16 706 720 706 727 0.92
Sequence Information
- Coding Sequence
- ATGGATGAATTTCGATCGAAGAAAATTGAAGCGGCAGCGCAGAAAATCTTTTATGAAGTTTCATCTAGTTCTGAGGACGAAGGCGAATATGATGAAAAAAGTATACTTGACTCGgtgtttcaaaaatatcaacCATCTTTTGACTTGTCAATAGCCGACTTCATTCACAATGGAAATGGCCAAAGATGGAGCCGAACTTCCACCTTTCTCGAGAATGTATTGCACTCAAGTGCGGCATGTCTCATATGCATCGGAAGTATACGGCGAGCTGAATCCATATGGTCTTGCAAAAACTGTTTTTGTTTCTTCCATTTGAATTGCATTCAGCGATGGGCAAGAGATAGCCTTGTTCAAATGAAAGCAAAGGCTGCAGAGCAGCAAAACGATGGCCAGGCATACTACAATCACCAAGGCGAGTACGTGCAGCCACTCAAAccgaaaaaatcattttattggAGCTGCCCTCAATGTAGAAAAGATTATTCTCCAAATGAACGACCCGAacaatataaatgtttttgtgaAAAGGAAATAAATCCGTTACCTCAACCTTTCATTGTCCCTCATTCTTGCGGGGAAATCTGTGGCAAGCAGCTTCAGCCGAAATGTGGTCACGAATGTAAACTACTGTGTCATCCGGGACCGTGTCCACCTTGTGCTCAGCTAGCACAAGTCTCGTGCCTCTGTAAGAGGTCATCACTGCGTACCGTGCGTTGTATAGACAAGGAATGGAAATGCGAACAAATTTGCCAGGAATTGCTTAAATGTGGAAAACATGaatgtaaacaaaattgtcATGAACCAGGTCTATGTCCGCCATGTTCCAGCAAGAGCACTCAACCTTGCAAGTGCAAACGTGAGGTGAAAAGCGTTAATTGTGCACAACTAATATGGAGATGTCAAAATGTTTGTGGCGCAGCATACTTGTGTGGTCTTCACCGCTGTGAAAAAGTTTGTCACGATGGCCCGTGCGGAGATTGTCCCCTAAGCCTTCCAAGACCATGCCCTTGTGGAAAAAATATCCAAACTATTCCCTGCAGTCAGTCAGTTGATACTTGTTGCGATACTTGCCAGAAATTACTACATTGTGGATTACATACTTGCGCGCATCGTTGTCATCGTGGAGCATGCAACAAGTGTCTAgctataacaaaaaagaaatgtcGCTGTGGATTACATGAAAAAGAAGTGCCTTGCTATAAGGTCTTTACTTGCGACACAAAATGCAGGCTAATGCGAGATTGTTGCAAGCATATGTGCAATCGAAAGTGTTGTGACGGCCATTGTGCTCCCTGTGAGAAGATCTGCGGCAAACAGCTTAATTGCAATAAACACAAGTGCCAATCAGTTTGCCATAACGGTCCCTGTTTTCCCTGCCAAAGGGAGTCTCAAGTCAATTGTCACTGTGGAAAAACTCGAAAATCTGTGCCTTGTGGACGTGAGCGTTCTGCCCGAATTGTTTGCTTAGAGCAATGCCGGACTCCGAAGAAGTGTCACCATGTTACCATTCATCGTTGCCATAAGGGTCCGTGTCCACCATGCCGTGAGAAATGTGGACTCCCAAATGATTCCAGTGACTGTAAACATATATGTGAAGCTAGGTGTCATGCGGCAGTTCCATTAGCTAAGGACATTGGAGGTGCGCGGGGTGATAAGAATGAATACAAGGCCTTGCCACACCCGAAATGTGAAAAAGACGTTACAGTATCATGTTTCGGGGGTCATGCAGTTGCTATTCGACAATGTTTTCAACCAAGCACTTTTTCATGTGGAGAACGTTGCGGTAGAAAATTAAATTGCGGCAACCACTTATGTACGCTTGTCTGCCATCCCGTTCCAAACCCACATGATAAACGGgagcAGATCGGGTGTGCCACGTGTGAAGAGAGGTGCGATGTTCCTAGGCCTTTGGGCTGCAAGCATGCCTGCTTAAGGCTTTGCCATCCACCTCCGTGTGAACCTTGcaatttcaacataaaaaataaatgccactGTGGACTAAACTATGTCTTGTACAAGTGTCGTGAATTTTTTGATGTTAGTGGCGCAAGTGAAGCGATCTCACGGCAAGAACACTTTCTTAGTTGTGGAAATCGTTGTTTTAAGGAATTCGCATGCGGCCATCGATGCAAAGCGATATGTCACTCTGGAAAATGCCCGAACCCTGAACTCTGTtgtaaaaaagtacgcattttttGTAGCTGCAAAAGAATCAAGCTTGAAATTTCTTGCGAAAAACATAGAGCTGGATTATTAGCATTAAAATGTGATGAGCAGTGTGCCGAAGAATACTCTATCTCGTTTgcagctaaacaaaaaaaaattgaacaggAATTACGCAATGAGCAATACAAAAACCAgctagaaattgaaaaatttgaaaagaagtCTACGAAGCGGAAAATTAGAATACGTAAAAGTCTTATAAATCCAACCAAACCAAATACCAACTGGAGGAGGTTGGGCATAATTGCTCTGGCTGTATTATCATTTGTTATAGCTGTTAGTGTAGCTTTTTACGCCGATGGTTAA
- Protein Sequence
- MDEFRSKKIEAAAQKIFYEVSSSSEDEGEYDEKSILDSVFQKYQPSFDLSIADFIHNGNGQRWSRTSTFLENVLHSSAACLICIGSIRRAESIWSCKNCFCFFHLNCIQRWARDSLVQMKAKAAEQQNDGQAYYNHQGEYVQPLKPKKSFYWSCPQCRKDYSPNERPEQYKCFCEKEINPLPQPFIVPHSCGEICGKQLQPKCGHECKLLCHPGPCPPCAQLAQVSCLCKRSSLRTVRCIDKEWKCEQICQELLKCGKHECKQNCHEPGLCPPCSSKSTQPCKCKREVKSVNCAQLIWRCQNVCGAAYLCGLHRCEKVCHDGPCGDCPLSLPRPCPCGKNIQTIPCSQSVDTCCDTCQKLLHCGLHTCAHRCHRGACNKCLAITKKKCRCGLHEKEVPCYKVFTCDTKCRLMRDCCKHMCNRKCCDGHCAPCEKICGKQLNCNKHKCQSVCHNGPCFPCQRESQVNCHCGKTRKSVPCGRERSARIVCLEQCRTPKKCHHVTIHRCHKGPCPPCREKCGLPNDSSDCKHICEARCHAAVPLAKDIGGARGDKNEYKALPHPKCEKDVTVSCFGGHAVAIRQCFQPSTFSCGERCGRKLNCGNHLCTLVCHPVPNPHDKREQIGCATCEERCDVPRPLGCKHACLRLCHPPPCEPCNFNIKNKCHCGLNYVLYKCREFFDVSGASEAISRQEHFLSCGNRCFKEFACGHRCKAICHSGKCPNPELCCKKVRIFCSCKRIKLEISCEKHRAGLLALKCDEQCAEEYSISFAAKQKKIEQELRNEQYKNQLEIEKFEKKSTKRKIRIRKSLINPTKPNTNWRRLGIIALAVLSFVIAVSVAFYADG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338005;
- 90% Identity
- iTF_00338005;
- 80% Identity
- -