Basic Information

Insect: Chymomyza costata
Gene Symbol: hang
Assembly: GCA_018150985.1
Location: JAECWU010000127.1:12374417-12392186[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.26 20 5.9 1.0 3 23 272 293 271 293 0.93

2 19 0.33 26 5.6 3.2 3 22 399 418 397 418 0.89

3 19 0.00055 0.044 14.3 3.3 1 22 499 520 499 522 0.90

4 19 0.064 5.1 7.8 0.1 2 21 534 553 533 554 0.93

5 19 0.00064 0.051 14.1 0.2 2 23 673 695 672 695 0.95

6 19 0.0017 0.14 12.8 0.5 1 23 703 726 703 726 0.96

7 19 4e-05 0.0032 17.9 0.2 2 23 807 828 806 828 0.97

8 19 0.00026 0.021 15.3 2.9 2 23 908 930 907 930 0.97

9 19 0.021 1.7 9.4 0.2 2 23 939 961 938 961 0.95

10 19 0.0041 0.33 11.6 0.3 1 23 974 997 974 997 0.97

11 19 0.00012 0.0092 16.5 1.1 1 23 1035 1057 1035 1057 0.99

12 19 0.0018 0.14 12.7 0.9 1 23 1065 1088 1065 1088 0.96

13 19 2.3 1.8e+02 2.9 0.2 2 19 1096 1113 1096 1114 0.92

14 19 6.6e-05 0.0053 17.2 0.4 3 23 1194 1214 1193 1214 0.98

15 19 0.0046 0.37 11.4 0.1 1 23 1249 1271 1249 1271 0.97

16 19 0.00055 0.044 14.3 0.6 2 23 1340 1362 1339 1362 0.93

17 19 0.23 18 6.1 0.2 2 20 1382 1400 1381 1402 0.91

18 19 0.0059 0.47 11.1 0.3 3 23 1417 1437 1417 1437 0.98

19 19 6.2e-05 0.005 17.3 2.1 1 23 1821 1843 1821 1843 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.26	20	5.9	1.0	3	23	272	293	271	293	0.93
2	19	0.33	26	5.6	3.2	3	22	399	418	397	418	0.89
3	19	0.00055	0.044	14.3	3.3	1	22	499	520	499	522	0.90
4	19	0.064	5.1	7.8	0.1	2	21	534	553	533	554	0.93
5	19	0.00064	0.051	14.1	0.2	2	23	673	695	672	695	0.95
6	19	0.0017	0.14	12.8	0.5	1	23	703	726	703	726	0.96
7	19	4e-05	0.0032	17.9	0.2	2	23	807	828	806	828	0.97
8	19	0.00026	0.021	15.3	2.9	2	23	908	930	907	930	0.97
9	19	0.021	1.7	9.4	0.2	2	23	939	961	938	961	0.95
10	19	0.0041	0.33	11.6	0.3	1	23	974	997	974	997	0.97
11	19	0.00012	0.0092	16.5	1.1	1	23	1035	1057	1035	1057	0.99
12	19	0.0018	0.14	12.7	0.9	1	23	1065	1088	1065	1088	0.96
13	19	2.3	1.8e+02	2.9	0.2	2	19	1096	1113	1096	1114	0.92
14	19	6.6e-05	0.0053	17.2	0.4	3	23	1194	1214	1193	1214	0.98
15	19	0.0046	0.37	11.4	0.1	1	23	1249	1271	1249	1271	0.97
16	19	0.00055	0.044	14.3	0.6	2	23	1340	1362	1339	1362	0.93
17	19	0.23	18	6.1	0.2	2	20	1382	1400	1381	1402	0.91
18	19	0.0059	0.47	11.1	0.3	3	23	1417	1437	1417	1437	0.98
19	19	6.2e-05	0.005	17.3	2.1	1	23	1821	1843	1821	1843	0.99

Sequence Information

Coding Sequence: ATGTGCGACGCTGCCGCAGCCACAACAACAACAACAACATCAGCAGCAGCAGCAACCACATCGACGTCGTCCACGGTGGAACCTTTGCGGTCGCGACAAAGCTGCTGTCGCCTCTGTATTGCCCCCGCTACGGAATGCATTTCAATTATCAACAGCTATGCGGCCGATAAGGAGCCGCTCTCAACCAAAATTCAAAACTGCGTTAATATTAAGATCACGCCACAGGATCGCCTCTCCTTGCAAATCTGTCATGCCTGCATAAGTTACTTGAATTCATGGCAGAGCTTTAAGAATCGATGCCTTAGCTCACAAAGCAAGCAACGCAGTTGGCTGGACACAAATAAATCCAAGCAGCAGCAACAACATCTATTAAACTATTTGGATTTAAATAGCGCAGAAAATGTGGGCAATAACAGCTTACTGGATCAGCAGCAACATGATCAGCAGCAGGAGTTGGAGGAGAATGCTTCAACAGCAGCGGAAAAGTCTTCAGCCGCCAATATATTGGATGGCATTCCCTCGCTAAAGAAGCGCAAATCTTTAACAGTTTATCCACTGCCAGCCATACCTATAAAGGATGAGCCCATTGATCCGGATGAGGATTATCAAATGAAGTCCTTAGATGAGTCCGATGATATGGTGGATCCCACAATGTTCCTAGAGCGTTCCGAGCATGAGGGCGATGTGCCGCTCATGACCTCTGACTATGATTATACGGCGCAGCACAGCGTAACCGCAGCGGCTGCTGCAGCAGCTCTACCCGCCACTGTCGTGGCCAACGTAGCTGCTGCTGGCGATTCCAAGGTAGCCTCCTGTCGCGCTTGCAGCTTGCAGTTTTCAACGCGTGCTAACGCACGTCGCCATGAGCGCAATTTGCATCCAAATCTGTTTCAATTGTCCACGGACTCGCCTAATAATACGCCGATTACAAAACCAACGGCAGCTCTGGCTGCTGCCTTGGAGATTCAAAGAGCAGCTGCTGCTGCGGCCACCGCAGAGGCCACGCGTGCTGCAGCCAGCGGGAATATATCTACACAAAAGTATCGTCAGGTAGTCATGCATGCGTTTATGAAATGCGAGGGTGGTGGCTTTGATTATGAAAATCCTGAGCAGTATCAGCATTTGCTCAGCAAGGACAAGTATGATTTTATACAGCAAAATAGCGAATTCTTGGAGCAATACCAGACAATGACCTGCCGCTGTTGTAACAAGTACTTTAGTACATATAAGAACTTTATGGCACATGTGCGAAAGAAGTATCCAACGTTGCCACGTAATCTATGCTTCAACTGCCTCAAGATGAATGATTCCAAAGCGCTGTTCATATCGCACTTGAAGAAACGCAACTGTATCAATCTGTACAAAGTGCTTAATAGCTTGCGTGCTAAGCAGCCAAACTTTGTGCCCGCTGATGCCATCGCGTCGGTATCTACCTCGGATACATCGGTTGTACCGGAAAAGCTAAGAGCAAAGGAGTTGCTGGTTAATAAACTATACGAGTGTAAACTATGCCCCAAGGGCTTTCGCACAAAGCATGAATTTCGCACGCATGTCTATGACAAGCATGCGGATGTGCAGCGCAAGGATAACAACTCTATACAATGCAGTTTTTGTGGCCTGGATTTTGCCGATCCGGTGGATAGGCGCCGGCACTATAATAATATGGATTGTATAGTTAGATTGCGTTGTATGACATGCGATGCTAAGCTAGAAACTCATCAGCGTTTTCTGGATCATGTTTATCAGGACCATTTGGGCGGCATAAGCAGCGATAATGCCTCGTCGGCCAGTGGACTTGCTCGTAGCAACAGCATGGAGCCTTCACCGGGAAAACGCAGTCTCTTAGGCGCTCTGGGCATCGGTGTATCCTCCTCGAATGAGGAATCACGCAGCAGCAGCGCAGCACCAACGCATACCTCTACACCCAAATTGGGTAGTGGCGCTTTGCCAGCACCAGGGAATACTTCTGCTGCTGGACAAGCACCTAAATCACAGTACTTTTCGCGCATGCCCCAAGTGTGCCCGATTTGTGGACAGCAGTACAACAACTATAATAATGTGCTGCGCCATATGGAGTCAAAGCATCCCAATAAGCTGCCAGAAACCTATAAATGTGTGCGTTGCGGCCATGGCTATCCACGCATTTCCTATTTGCGCGAGCATATGATTAATGTCCACGGTGTGGACAAAAATCGTCATTCTGGCGGTTTTGAGTATATCGTGAATGCGGATGCTGTCAAATTAGCGGATGGCAGCACGCCCAATGTGTACACTGGTCGTTACGATTATGTAATGAAGGATTTGATGTCGATAACAAATGATGACGAGGAGGAGGAGGCTAGCGTAGCCAAAAAGATTCGTCTTGACGATAGTGGCACCGCCGGCAACAATAATTCCAGCAGCGGCAACCAGCAAAAGGAATGTCCAATTTGCAATTCAGTGTTTAGCAACAATATTGGCCTATCCAATCACATGCGTTCGCATTATACAGCTTCCAGTGCCACCAATGCCGCTTTGGCAGCTGCCAATAGAATGACACCCAAATCCCTGACCATCACAGCTACCAGTTCGGCTAAGACTACACCCACACCGGCAGCGGCTACAACAGCTAATGTAAGCGGCGGCAATCTGCCACCAGCCATGGCCAATCAAACACCCCAGGAGCAGGCCGTATTTAGACGTAGCCTGGATCAAGCGGCCGATAGGCGTTTCCGTCGAATGCGCTGCCGCATTTGTCAGCGTCGCTTTAGTTCCAAAAAGTCTTATCGCTATCATATGCTTACCGATCATCAAGTGCAGAATGTACAATTTATTAAATGCAAGCTCTGCAACGCCGAGTTCGCTTATGAGAAGGGACTCAAAGTGCATCTCTTTAAGGTACACGGTACTGTGATCAAGGATGAGATGATTATAAAGCAATTTGAATGTGAGTTTTGCTCGATTGTGTACAGTTCTGAGTTGGAGCTGCAACAGCATAAGCGCAGCGTGCACAAACAGGCAGTACTTAATGCTGCTGCTGGCGGCGGATCAGCTCAAAATGAGTCCTTAGTTAAAGACGAAGTTGCGGATACTTCGGCGGTGGCTGTTATGCCACTCTATTGGTATCAATGCAAATATTGTCCATCAAATTTCAATACCAATAAGAAGCTGGCCATACACATTAACTCCCACGATGAATTCGATTCAAATGACTATTCCTGTAAGGATTGCGGCAATGTATATAGTGGACGCAAGAGCCTCTGGGTGCACCGCTATAAAAAGCATCCGCAGGTGCCAGATCCCGCCGAATGTGTGCTCTGTCGCAAAATCTTTTTTGATCGTCAAATGTTGGACAATCACACGCCCACATGTAACCGCAAACCGATTACTGCCACTGGGGCACACCAACAGGATGCTAATGCTTCTTCAACGATGACCATGTCGGGACGCGTTTTCAAACACAAAACTGGCGATGATGATGACGAGGATGATGAGCTTATGCTGGAGGATGGAGGAAGTGACAGTAATATCCAAGGTGTTGGCCATTTAGCTGGCACTTCAAACAATCAGCCTTTGAAGATACGTATACCAGAAGTGGCTTGTACGATATGCGGAGCTCGTTTTACTGATCAGGAAATGTTTAGCAAGCACATACAAAAGCATGAACAAGAATTGTATACAGACAATCCATTGGCGGCTATGTTTGACGATGGTCCTGTTGATCAAAGTCAGTTTTATGTGGAGCGACCAAATGAGAACGGGGAATATGCTTGTGACTTATGTGCCAAGACATTCCCCCAGGTGATTGCGCTCAAGGTTCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAATCCCAACGACGGCGAAGCGACACAGAACAACAACAGCAACAACAACTCGCTGAACTCGTCGATGCTACACCTACGGGAACTACACGCAGTGGGGTTAATGCCAAATCAACAACGTCTTCACAACAACAACAACTCGGGTGCAGCAACATCGAGCAAATCCCTGAAACGCAAGCGTGAACTTAAATGTGAATATTGCGCTTCGACCTTTATAAGTAACAATAATCTTCGTCGTCATATGTATGAGCTGCATAAACATGAGGTTAGCAATTTACCAGAACCGCCAGTTATAGAAGTGGATAAGCCATTGTCCTGCAGACGCTGTGATCTCAAATTTAAAACAAAGGAATTGTGGATAGAACACAAATTGGCCGATGCCAAGGTAACACGTCCTTTCTGTCCATTTCAATGGGGCTGTGATTTATGTGGCGAGTATTTGTCGCGAAAAGAAAAATTAATTAATCATATAAACAATCATTTAAAAGAGGAGGTAATAGTACCAGTGGTAACTAAGACTACATCAAATAAATCTGCGACCGAGACACCAACAAACAAAAAAACAAGTAATGCAACAACAACAGCGAAAAAATTAACAACAAGCAGCAGCGGCATAGTGCCTGAAAAAGGGGCACCAAAAGCAGCTAATGCTACGCAGCAAGCCAAGGAAAAGCCAGTTATAAATAAGGAGAAAACGCAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAATTTGGTTGCAGGCAGAAATACGAATGAGCTAGAAGATGATGATCTAATAGAGCATATTGAGGAGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATCCGTAGCGCAAAGTTACAGTTGCCGACGCATGTTACCTTTGATGGCATTGAATATATACGCACTAGTAAACATAAGAGTGTTAATGGCAAGCAAGAACAGCAACAGCGCATCAATTCCAATGATGTTGATGATGAAGAGCAGCAAGAAAATAATGCTATTAATAAAATGCATCAGGTCATAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGGTGTTTTAAACGCGGCTGAGGATGGAGTTAATAAAGGCGCTACGGCCTCAACAAGCTCCTCCTCAACGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTGAGTCAACAACATCGCATTCAACTGGTGAGCGGCGTAAAAATAAAAATATACATAATAAAAAAACAGCAGCAGCAGCCATAAATACAAATGCTGCTGCTGATTGCATTGAACAGTCTAGTAATTCCAGTTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTGCAAACTCACATCAAAAGTCATTTTCTCAATGGACCGCAAGTCGCTAGCAATGGTACAAAGGCGGCAGCCACAACCAACACAACAACAACAGCAACGTCAGCAAATAACAACAATAAAAGCAAACCGTCCTGCATGGATATAAAAAGTCCAACAGCGGCAGTAGCAACAACTGCTAGCAATTGA
Protein Sequence: MCDAAAATTTTTTSAAAATTSTSSTVEPLRSRQSCCRLCIAPATECISIINSYAADKEPLSTKIQNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRCLSSQSKQRSWLDTNKSKQQQQHLLNYLDLNSAENVGNNSLLDQQQHDQQQELEENASTAAEKSSAANILDGIPSLKKRKSLTVYPLPAIPIKDEPIDPDEDYQMKSLDESDDMVDPTMFLERSEHEGDVPLMTSDYDYTAQHSVTAAAAAAALPATVVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTAALAAALEIQRAAAAAATAEATRAAASGNISTQKYRQVVMHAFMKCEGGGFDYENPEQYQHLLSKDKYDFIQQNSEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPTLPRNLCFNCLKMNDSKALFISHLKKRNCINLYKVLNSLRAKQPNFVPADAIASVSTSDTSVVPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGISSDNASSASGLARSNSMEPSPGKRSLLGALGIGVSSSNEESRSSSAAPTHTSTPKLGSGALPAPGNTSAAGQAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGHGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNDDEEEEASVAKKIRLDDSGTAGNNNSSSGNQQKECPICNSVFSNNIGLSNHMRSHYTASSATNAALAAANRMTPKSLTITATSSAKTTPTPAAATTANVSGGNLPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGTVIKDEMIIKQFECEFCSIVYSSELELQQHKRSVHKQAVLNAAAGGGSAQNESLVKDEVADTSAVAVMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECVLCRKIFFDRQMLDNHTPTCNRKPITATGAHQQDANASSTMTMSGRVFKHKTGDDDDEDDELMLEDGGSDSNIQGVGHLAGTSNNQPLKIRIPEVACTICGARFTDQEMFSKHIQKHEQELYTDNPLAAMFDDGPVDQSQFYVERPNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPNDGEATQNNNSNNNSLNSSMLHLRELHAVGLMPNQQRLHNNNNSGAATSSKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDKPLSCRRCDLKFKTKELWIEHKLADAKVTRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVIVPVVTKTTSNKSATETPTNKKTSNATTTAKKLTTSSSGIVPEKGAPKAANATQQAKEKPVINKEKTQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLVAGRNTNELEDDDLIEHIEELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIRSAKLQLPTHVTFDGIEYIRTSKHKSVNGKQEQQQRINSNDVDDEEQQENNAINKMHQVIAXXXXXXXXXXXXXXXXMGVLNAAEDGVNKGATASTSSSSTSXXXXXXXXXXXXXSESTTSHSTGERRKNKNIHNKKTAAAAINTNAAADCIEQSSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPQVASNGTKAAATTNTTTTATSANNNNKSKPSCMDIKSPTAAVATTASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336377;
90% Identity: -
80% Identity: -