Ccos013863.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- Nfat5
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000255.1:4671156-4693214[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-36 3.5e-32 111.7 1.1 1 168 43 202 43 203 0.97 2 2 0.17 6.2e+02 0.3 0.0 48 73 302 327 291 350 0.78
Sequence Information
- Coding Sequence
- ATGCTGTTGTACTCAACAATTGTTCTCAGGTTTATATCGACACGTGCTGTAAACCGTGTGGCCAACAAACGACAACCCACCGCGCCGCTTAACAGCATTGCCAGCTCCAACGATGGACAGGTACAGCTTGAGATTGTCTCACAGCCGGAGCAACAGCATCGTGCACGCTATCAGACCGAAGGTAGTCGTGGTGCCGTTAAGGATCGCAGCGGCAATGGATTTCCCATTGTACGTCTGACTGGACACGATAAGCCCGCTGTGCTGCAGGTCTTTATTGGCACGGATATTGGACGTGTAGCGCCGCATATGTTCTATCAGGCCTGTAAGGTGGCTGGTAAAAATTCAACCCAATGCAATGAAAAGAAGGTGGATGGCACTATGGTTATTGAGATTGATTTTAAGCCGGAAACGGAAATGACAATTACTTGCGATTGCGTTGGCATCCTAAAAGAACGCAATGTTGATGTGGAGCATCGTTTCCCAGAGCATCTGGCACCAAAGAACAAAAAGAAATCCACACGCTGCCGCATGGTTTTTCGCACTCAATTGACACGTGAGGATGGCACGACCGAAACCCTGCAGGTCTGCTCGAATCCCATTATATGCACACAACCACCTGGCGTGCCTGAAATTTGCAAAAAGTCGCTTAACTCTTGCCCAGCCGATGGTGGCCTGGAGTTGTTTATTATTGGCAAGAACTTTTTAAAGGACACACATGTTGTGTTCCAGGAAACCTATGACAGTGTTAATGCCGATGATCCGGCTACAGAAATTGCTGTGCGTCAGCAATTAATTGGTGGCACTGCCGCGCTCTGGGAGCAAAGCGTGCTACCCGATAAGGAGTATTTGCATCAGACCCATCTCATTTGCACGGTTCCGCCGTATTTGCATCAGAATCTGCTCAAGCCAGTTACCGTGCAGGTATCCATTGTATCCAGCGGCAAGAAGAGCGAACCGCATACCTTTACCTATACGCCCAAAGGCAGCTATACAACACTGGCGGCGGCCAGCACGTTAAGTAGCACTATGCATACACAAGATGTTACCAACTATATGGACACCACCGCTGCACCTGGCGCTGCCAGCACGGCTTGGCCCTCAACCAGCGCTGCCGCTGCCGCAGCCGCCGCCGCTGCTGGCGTTGTGGTAGAGACCAAACATGAAATTGATTCGGGCATGATGCCACCGCCCATAACAACACAAATACCCATGGGTGTGCGTCGTTCCTCGTTGCCCAGTGCTACGCCCATGATCACCGATCAGCAGCTGGTGCATTTGACTGCTGTGGCCAATGCTGAGGCGCTTAAAAGTGAGCTGCTCGATGACAGCAGCTCACATAGTCCACTAAATGCGGATTCGCTGCACTCACCGGAAACGCTGAATCCTTGCAGTCCAAATGCACTGCAATACCATGCACGCTTTGCGCGCAAGACCAGCATGGACACCATAATGTTCGATCAGTCCAATAGCTTGCCCGGCTTTCCCGTGCAAGCCAGCGCAGCTGCAGTAGCTGCCGCCGTGGACATAGATCCAGCCGCTGTCAAAGTTGCCGTAGAGCTAGCCGTCAAAAATGAGATTGTCAAGCATGTGGTGCATCATCATCAGCAGGCTGCCGCAGCGGCAGCGACAGGATCACAGCTGCAGCAGCAAAATGATGCCAATGTGCATAAGTTTATTGATGATCTTACCAATTCGACATCGGTGGTAACCAGTAATGGCACTACCGAGCCGGTCTTGTTTACCACCTCGGCGGTGATTGATCATGCTCTAACCGATATACTGCAACAGGAAGTGGGCGTTCTTGCTACTACGTCAACAAATGGTGGTGTACTAGAACGCAGCCTATCCATGTCTAGCAGCAATAGTAACAGCTCGCACTCCGGCAGCGATGCCTCACCAGTCAATTCACTCAGCGCTGGTGGTCATAGCTCTCCGCTTACTCAGGACATTATACTCAATTCTGAGCCGGCGGCTGCGCTTGGCGCCTTGCCGCTGCAACAGATTTTGCCGGATAATGTGCCCGCTGCAGGCGTTGAAGTGCCAGCTGCAGCACTCTCCACAGACATTATAATGAATCCAGCTGTCTCACCATCAACCATACTCTGCTCGGCCAATGGCAATGCCACGGCTGTGGTGCCCAATATAATGGCACCACATCAGGTGACCATGGCCAATTCCATACTTAATGATATTGCCATGCAGACAGATCCTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCTACTGTTGTCTACTTCGCCTGTTGTTGGCGAGACATCCGCCGAGGCTGGCGGCTATCCACAGTTAACCGCACACTTGCCCATTGTGCCTGCCGCGCAACAAGAATCTCTCATTGTCGCCTTGGCCACTGAGAATGCAATGCAACAGTCTGTGGCCACAGCGGCCGTAACCACCAATGGCTCGGTGGTGACACAACAGGCATCGGCGCCCACCACAGCTGGCAGTATATTGCCCACAGCAGTTGGAGCTGCAGCAGCAGCTGCTGCCGTGGCGGTGCCAATGCCACCGCCCATACCACAAGAGCTGACCTCCATGTCGGATCAGGATCTGATAAGCTATATAAATCCAAGCACATTTGATCAGCTATAA
- Protein Sequence
- MLLYSTIVLRFISTRAVNRVANKRQPTAPLNSIASSNDGQVQLEIVSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLTGHDKPAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTMVIEIDFKPETEMTITCDCVGILKERNVDVEHRFPEHLAPKNKKKSTRCRMVFRTQLTREDGTTETLQVCSNPIICTQPPGVPEICKKSLNSCPADGGLELFIIGKNFLKDTHVVFQETYDSVNADDPATEIAVRQQLIGGTAALWEQSVLPDKEYLHQTHLICTVPPYLHQNLLKPVTVQVSIVSSGKKSEPHTFTYTPKGSYTTLAAASTLSSTMHTQDVTNYMDTTAAPGAASTAWPSTSAAAAAAAAAAGVVVETKHEIDSGMMPPPITTQIPMGVRRSSLPSATPMITDQQLVHLTAVANAEALKSELLDDSSSHSPLNADSLHSPETLNPCSPNALQYHARFARKTSMDTIMFDQSNSLPGFPVQASAAAVAAAVDIDPAAVKVAVELAVKNEIVKHVVHHHQQAAAAAATGSQLQQQNDANVHKFIDDLTNSTSVVTSNGTTEPVLFTTSAVIDHALTDILQQEVGVLATTSTNGGVLERSLSMSSSNSNSSHSGSDASPVNSLSAGGHSSPLTQDIILNSEPAAALGALPLQQILPDNVPAAGVEVPAAALSTDIIMNPAVSPSTILCSANGNATAVVPNIMAPHQVTMANSILNDIAMQTDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLLSTSPVVGETSAEAGGYPQLTAHLPIVPAAQQESLIVALATENAMQQSVATAAVTTNGSVVTQQASAPTTAGSILPTAVGAAAAAAAVAVPMPPPIPQELTSMSDQDLISYINPSTFDQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338101;
- 90% Identity
- -
- 80% Identity
- -