Ccau014761.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- CSRNP3
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000191.1:247297-250196[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.34 6.6e+03 -3.1 1.3 87 112 56 81 28 109 0.53 2 3 0.18 3.5e+03 -2.3 0.3 27 71 261 304 260 350 0.43 3 3 6.1e-96 1.2e-91 306.6 10.6 2 218 365 567 364 567 0.91
Sequence Information
- Coding Sequence
- ATGGAAAGCATGTTCAGGCCCATCAAGAAGATATTCACTTATATACAGAAGAATGCCAGCGGAAGCACAATGTTCGGGAACACAAATAGCAGCGTAACAGCCAACGAGGAAGGCGTAAAAACAAGCAGTAGCATTAGTGTTAGCTCCAATGTAGTGCCAGATGAAGCCAATGACACACAACTGGATGCTGAATTAAGCAGCAAGACAGAGCATGATTCAGCAgagcaaagcagcagcaaagcttTATGGTCTATTATTGAGGAAGATGAGGATGATATCGAGCGGCAGTTGAAAACTTCCATAATCGATGCCAGTAAAATGAATGCCGGCCTTAAGGCCAAAACTTTAGGAAAACCCATTGTATTGTCGCCCAAATTGCAGCTGGACGATGAGCTGTCGGACTTTGCTCACGAACCAGTGGAGCTTAATGTAAGTGGCGGCGAGGATGATATTGAAGAACAATTCTTGGAGTTGGATAACTTTCCaaacaatgaaattattgTATTGCACGATACCGATCTCAATTCATCAATAGCTTCGGATAATGTTTCCGAAGATCCACTGGCGATAGATGATTTTACGCAGCCCTTGGTGCGTGACTCCGACAATGTGCTCGATTCTTCTTCAGTGACCACTAACGAAGAGGTAGATGCTGGTGCTGATATGCTCTGGCTAAAACTACCGCCAGATGGCGAGGAACAAGTGTCAGAagagccagcagcagcaatgacaGCTAGCAGCAGCACGCCCCAGCTTAAAAAGGCCAAAGAGGATGAGCGCAGCGACGGTGGCTCTGACTCTGGCTTGGGAAATGAGACATCCACGCTACAGAATACGCTAAACAATCTAAGCAACGTACAGCAGGCTACGCCCCACAAATCAAGCAACCCGGCTAGCCCACAATCAAAGCCAGCAGACGAAACAAGCAAGCCAAGCGACTTGTGTCAAGCATCCACATCTCAGGCCAACGGGGAATCAAAAAAACCGGTGCGTTCCAATCTCAAACGCAGACTAGAAGAAGCCGATGGTATGGATATGGCCTTGGAAAATGGCTTGGTATCCAGCAGCGTTGAACTTATCCAACAAAAACGCCAAAAACGTTCCATAAACTTTGACAACGTCAAAGTTTATTACTTCCCACGCCAGCAGGGCTTCAGCTGCGTGCCTACAGCAGGTGGCTGCACGTTGGGCATGGGAGCCAGGCACATTGCCTTTAAGACTATGACGCTGGCGGAACATGCAGCGGAACTACGACGTGCGCATCGCAATCAAAACCAGGAACTGCAGCCGCGCGGTTCTTCCAGCGATGATAGTGAAGAATCTGAGGAGGATTACTTGAGCGAGGGCAGCGGCTCGGATGCAGATGGTGACTCTAATGGTTTTCTTCAGCCTGTTACACCTAAGCAACGACGTGCGCTCTTAAAAGCAGCCGGTGTGCGAAAGATTGATGCCAGCGAGAAAATTGACTGCCGCGATATACGTAATTCGCGAGAGGTATGTGGCTGTTCTTGTCGGGAATTTTGTGATCCAGAGACCTGTGCCTGCAGCCAGGCAGGCATCAAGTGTCAGGTGGATCGCGCCATGTTTCCTTGTGGCTGCACTCGTGAGGCTTGCGGCAATACAGTGGGTCGTGTTGAGTTTAATCCAACTCGCGTGCGTACACACTATATACACACTGTCATGCGGTTGGATATGGAGCAGCGGCAGGGACAGAATCCAAGCAGCCTCAGTTACGGCAGTACAGCAGCGCCGGTTTCGCATTGTTACTTTATGCAGACACAGTCCAACTATAGCTCTGGTTATGCATCGCCAGCTTATACCCCCGATGGCACGGTCAACTATtaccaacaacagccacaaggTCAGCCAACTCAACAGCAGCCGCTTGCAGAACAGCCAGGCTATGGCAGCCATCAGGACTTACATACACCACAGTACCCATTGGATAGTCTGGACTCTGGGCTATTTACCAACGGCAACAATGCTACGCCCTCTTATGGCGAGCTACTAGCGCCCACCTATCACAGTCTCAGCTATGGAAGTGCCAACAGCGCAAGTACAACTCAGCTGGCGCCGTACTCCACCTATCatcagccgcagcagcagtcCAGCGGCAGCGCGACTACCTATCTTCCTCAAGCAACTAGTTCAACTGGATCAAATGGCGCGTATAGCTCCTGTGCTGTGCCATCGGCGCCGCCTTATGGCAATGCAACCACTACGGCATCCGCTGCCCAATATCATCACACTATTGTGCTAGAAACCACCGCCTCCATGACCTCTACCACAACGTTCCTGGCCACTGCGCCCACTGCTACTGCGACTTGTGCTTTCAGCAATGCAAATCGACATGCAGCTGTGGGTAGCAGTGCATCCGCTATCGCCGCTGCTGAATTCATAAGCCTAAGCACACCCAATGCCAGTTCCTCGCGTCTATCACAAATAAACGATCTGTTGCAGCACAATCGCAATACTACAGCCGCTTTAGTGGCCGTTTCGGAGTCACCGGGTACCACTCTGGCCTATGATGCAGTACGAAGCATAGCCAGAACCAGCAAAGCCACGCATACTGAAATAGCCAATAGCACAAGCTTAGACTCCATTGACACGCCACCCATTGAAGATGCACAACGCAATTGCACGGCGTTCGAGGAGCTACCACCACCGATGGTAAACCCTACACCTATCGTGGCCGTTGTGGAGCACAATGCAAAATCAACCACGCCCAATGCGCCAAAGCCACGTCAACCGCTGGACGTGTCCGCGAGCGGCGACAGCTCGAGTGCAGCAAGGGCGCTCTAA
- Protein Sequence
- MESMFRPIKKIFTYIQKNASGSTMFGNTNSSVTANEEGVKTSSSISVSSNVVPDEANDTQLDAELSSKTEHDSAEQSSSKALWSIIEEDEDDIERQLKTSIIDASKMNAGLKAKTLGKPIVLSPKLQLDDELSDFAHEPVELNVSGGEDDIEEQFLELDNFPNNEIIVLHDTDLNSSIASDNVSEDPLAIDDFTQPLVRDSDNVLDSSSVTTNEEVDAGADMLWLKLPPDGEEQVSEEPAAAMTASSSTPQLKKAKEDERSDGGSDSGLGNETSTLQNTLNNLSNVQQATPHKSSNPASPQSKPADETSKPSDLCQASTSQANGESKKPVRSNLKRRLEEADGMDMALENGLVSSSVELIQQKRQKRSINFDNVKVYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNQELQPRGSSSDDSEESEEDYLSEGSGSDADGDSNGFLQPVTPKQRRALLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQGQNPSSLSYGSTAAPVSHCYFMQTQSNYSSGYASPAYTPDGTVNYYQQQPQGQPTQQQPLAEQPGYGSHQDLHTPQYPLDSLDSGLFTNGNNATPSYGELLAPTYHSLSYGSANSASTTQLAPYSTYHQPQQQSSGSATTYLPQATSSTGSNGAYSSCAVPSAPPYGNATTTASAAQYHHTIVLETTASMTSTTTFLATAPTATATCAFSNANRHAAVGSSASAIAAAEFISLSTPNASSSRLSQINDLLQHNRNTTAALVAVSESPGTTLAYDAVRSIARTSKATHTEIANSTSLDSIDTPPIEDAQRNCTAFEELPPPMVNPTPIVAVVEHNAKSTTPNAPKPRQPLDVSASGDSSSAARAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00335887;
- 90% Identity
- -
- 80% Identity
- -