Camo000714.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- CSRNP3
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010000179.1:264537-267422[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.41 1e+04 -3.4 0.7 80 112 61 93 43 113 0.51 2 3 0.16 3.9e+03 -2.1 0.2 29 85 267 327 265 356 0.47 3 3 1.7e-96 4.1e-92 308.4 10.4 2 218 365 567 364 567 0.92
Sequence Information
- Coding Sequence
- ATGAACAGCATGTTCAGTCCCATCAAGAAAATATTCACCTATATACAAAAGAATGCCAGCGCAGGCACCATGTTTGGTAATACAAACAATAGCGTAACAGCCAACGAGGAAGGCGTAGCAGCAAGTAGCAGCAATGGCAGCTATAGTGAACTGCCAGAGGAAGTCACTGAGACACAACTGACTGCAGATTTAAGCAGCAAAATAGAGCACGAGGAGTCAGCTACGGAAAGCTGCAAAGATGATTTATGCTCCAGCATAGAGGAAGATGATGAACCGTTTGATGATGATATTGAACGGCAGTTAAAAACGTCTATTATTGATGCCAGTAAAATGAATGCAGGCCTAAAGGCCAAGACTTTAGTTAAGCCCATAGTTTTGTCACCGAATTTACAGCTGGACGATGAGCTGGCGGACTTTGCGCATGAGCCAGTGGAGTTAACTGTCAGTGGAGAGGATGATATTGACGAGCAGTTTTTGGAGTTGGATAACTTTccaaataatgaaattattgtATTACACGATACCGATCTCAATTCATCTATAGCGTCGGATAATATTTCCGAAGATCCGCTAGCCATAGATGATTTTACGCAACCCTTGGTGCGTGATTCAGATAATGTGCTAGACTCATCTTCGGTGACTACAAACGAAGAGGTGGATGCTAGTACGGATTTGCTTTGGTTAAACCAACAAACAGAGGGAGAGGAGCAGGTGTCAGAAGAGCCAGCAGCTGCTATGACAGCTAGCTGCAGCAGCACGCCACAGCATGCAAAGACCAAAGAGGATGAGCTACGCGATGGTGGCTCTGACTCTGGCATGGGCAGTGAGACTTCCACGCTACACAACACATTAAACAACTTAAGCGACGTACACCATGTGACGCCACATAAAATTGCTGAACCGACCAGCCCACAATTAAAATCAGCAACGGAATCAATCCAATCCAATGAGTTGGAGCAAGCTTCCACCTCCCAAGCCAGTGTGAAACCCAAGAAACCGCTTCGATCTAATCTTAAACGTAGACTAGAAGATGTTGATGGCATGGATCTAGGTTTGTCATCCAGCAGCACAGAAATAATTCAACAGAAGCGCCAAAAACGTTCCATCAATTTTGACAATGTCACAATTTACTACTTTCCACGCCAGCAGGGCTTTAGCTGTGTGCCCACAGCAGGTGGTTGCACGCTGGGCATGGGTGCCAGGCATATTGCCTTTAAAACCATGACGTTGGCAGAGCATGCAGCAGAATTACGACGCGCGCATCGTAATCAAAACCAGGAATTGCAGCCGCGTGGTTCTTCCAGCGATGATAGTGAAGAATCCGAGGAGGATTACCTAAGTGATGGCAGCGACTCAGATGCAGATGGTGATTCCAATGGTTTTCTACAGCCTGTTACACCCAAGCAACGGCGTGCGCTCTTGAAAGCCGCCGGCGTGCGTAAAATTGATGCTACCGAGAAAATTGACTGCCGCGATATACGTAATTCTCGGGAGGTATGTGGTTGTTCCTGTCGTGAATTCTGCGATCCGGAGACCTGCGCCTGCAGCCAGGCGGGCATCAAGTGTCAGGTGGATCGAGCCATGTTTCCTTGTGGTTGCACACGTGAAGCTTGTGGCAACACTGTAGGTCGCGTGGAGTTTAATCCAACGCGCGTACGCACTCACTACATACACACCGTTATGCGTCTGGATATGGAACAGCGACAGGGACAGAATCCAAGCAGTCTCAGCTATGGCAGTAGCGCATCTCCCGTATCGCATTGTTATTTCATGCAAACACAGTCCAATTATAGCTCTGGTTATGCCTCGCCTGCTTATACGCCTGATGGCACAGTCAGCTATTACCAACAGCAGGCTCCAGGCCCGGCGACTCAACAACCAGCGCTGGAACATCAGCCAGGCTACGGCAGTCATCAGGATTTACATACACCACAGTATCCATTGGACAGCCTGGACTCCGGGCTATTTACCAGCGGCAGCACTGCTACGCCATCTTATGGCGAGCTGCTGACGCCCACCTATCACAGTCTTAGCTATGGTAGCGCCAATAGCACAAGCACAACTCCGCTGTCTCCCTATTCCACctatcatcagcagcagcatcagacCAGCGCTAACGCGTCACCCTATCTGCCTCAAGGAACTACTTCAACCGGCCCAACTGGCGCGTTCAGCTCATGTGCTGTGCCCTCGGCGCCGCCATTTGGAAATGTAACCACTACAGCATCTGCCGCTCAATATCATCACACAATTGTACTCGAAACCACCGCCTCCATGACCTCGACCACAACGTTCCTGGCCACTGCGCCCACGGCTACTGCAACATGTTCTTTCAGCAATGCAAACCGACATGCAGCTGTAGCGAGCAGCGCGTCTGCTGTCTCCGCTGCCGAATTCATAAGCTTAAGCACACCCAATGCCAGTTCCTCGCGTCTATCACAAATCAATGATCTGCTGCAGCACAATCGCAATACTACAGCGGCTTTGGTAGCTGTCTCTGAATCACCGGGCAGCACTTTGGCCTACGATGCAGTGCGCAGCATAGCCGGAACcaacaaaaatatgcatacTGAGAAAGACAGCAGCACAAGCTTAGACTCTATCGATACACCACCCATTGAGGATGCACAACGCAGTTGTATAGCATTTGAGGAACTGCCACCACCGCTGGTCAATCCCACACCAATTGTGGCCGTTGTGGAGCACAATACAAAACCAGCCACACCCGATGCACAACTGCAATTGCCACCAGCGGCGCCACAGCCGCGTCAGCCGCTGGACGTATCGGCGAGCGGCGACAGCTCAAGTGCAGCAAAAGCGCTCTAA
- Protein Sequence
- MNSMFSPIKKIFTYIQKNASAGTMFGNTNNSVTANEEGVAASSSNGSYSELPEEVTETQLTADLSSKIEHEESATESCKDDLCSSIEEDDEPFDDDIERQLKTSIIDASKMNAGLKAKTLVKPIVLSPNLQLDDELADFAHEPVELTVSGEDDIDEQFLELDNFPNNEIIVLHDTDLNSSIASDNISEDPLAIDDFTQPLVRDSDNVLDSSSVTTNEEVDASTDLLWLNQQTEGEEQVSEEPAAAMTASCSSTPQHAKTKEDELRDGGSDSGMGSETSTLHNTLNNLSDVHHVTPHKIAEPTSPQLKSATESIQSNELEQASTSQASVKPKKPLRSNLKRRLEDVDGMDLGLSSSSTEIIQQKRQKRSINFDNVTIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNQELQPRGSSSDDSEESEEDYLSDGSDSDADGDSNGFLQPVTPKQRRALLKAAGVRKIDATEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQGQNPSSLSYGSSASPVSHCYFMQTQSNYSSGYASPAYTPDGTVSYYQQQAPGPATQQPALEHQPGYGSHQDLHTPQYPLDSLDSGLFTSGSTATPSYGELLTPTYHSLSYGSANSTSTTPLSPYSTYHQQQHQTSANASPYLPQGTTSTGPTGAFSSCAVPSAPPFGNVTTTASAAQYHHTIVLETTASMTSTTTFLATAPTATATCSFSNANRHAAVASSASAVSAAEFISLSTPNASSSRLSQINDLLQHNRNTTAALVAVSESPGSTLAYDAVRSIAGTNKNMHTEKDSSTSLDSIDTPPIEDAQRSCIAFEELPPPLVNPTPIVAVVEHNTKPATPDAQLQLPPAAPQPRQPLDVSASGDSSSAAKAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339137; iTF_00336720; iTF_00338326;
- 90% Identity
- iTF_00338326;
- 80% Identity
- -