Camo012422.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- pnr
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010002638.1:33098-38821[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9 2.5e+04 -11.4 9.2 4 10 24 30 24 32 0.79 2 3 4.5 1.2e+04 -3.6 0.1 23 27 74 78 71 82 0.62 3 3 9.8e-17 2.7e-13 49.7 2.9 1 35 543 576 543 577 0.98
Sequence Information
- Coding Sequence
- atgtgtAATGTACCGCTTAAGTATCGACAAGTTTGTCGATTGTGCCTCATTTTGAGAGCTGGCAATATCTgtactactaccactactactacaacaaccacaacagagGAGGAATACAATCAAGAGCATAGCGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGACAATGCCTAATGACGGCTTTCCTACAGTCATCTGCAGGGATTGCCGTGCCAAGCTTAAATCCTTTTGGATGTTTCGTTCTATGGCACTTAACTCACACAatgctttaaaagattttcttgCAGTTGCTGAAGCTTCGAAAAATTTCGAGCCTTCCTATTTGGAAATTAAATTGGACACAATTTTGAAATCTTCATCTGAAGCTATTGCTGCCAAGGCTCTGACCGAGCTAAGCAAGTCTTCGAAAGCCAAGTATACGAACTCAAAATTGGATGGTATGATGAAAACTCCCAGTGAAGTAGTATATAGAAGTGATCagcatcatcaacaacaactacagagCAAAATACAAGCACCTTCATTATATCTAAGCTCGTTTAAATCACCAGCAGCCTTAATGCAATCACCTTTAAATAAAGCAGACTATCCTGCACAAGATATTGTAACGCCCATAGATAGCGATAAACAATCTGATAATCGAACTgctaaatcaaaaacaaaagatgCAGAAGTTGAACAATATAAAAACTTGCAACAGCAACTAGAGACTGCCGCAGTGCTTATggatataagtaaaaaaattgttatttcacCTCCAAGCTCGAATCCCCAATCTCCATGTCTTACTGCTCTAGCAGATACAAGTATTAATAGTTCTGTGATAAAATCAAAACGTCCATCAAACGACAATGAAATTCAAGATGACATGGAAATAGATTTATCcgtcaaaaaacttaaaactgaaTATCCAAATCAAAGGAATTTAATCCAAATGCATCACCTTTGCCAAAATCCAATACTCGAAATGCATGCAAATACATCAAGAACTGATGTAGATAATAAAAACTACAGTATTAATATGAACGAAGCCGGACCGTCAGCTTATATAAAACCGCAAATCTCTAAGATAAAAACAGAAAACTGTAATGCCGCCTGTCTATCCGATTTGGAAGATAGTTCTGATTCAAACAAATTGGAAATGGATATTGCATCTGTTATAAATGATAGAAAAACGCCAGATAGTGTCAACTCCGATCACGCAACAGACATGGCTACAACTCAGCTTTGGCAAGCATTGGCGCGCTCTGCGGCCaagaataaagaaaaaactCCGGCCACGGAACTTTTACGCAACATGATGAGCCAATCTTTCGTGCTATCGGTGCCACCACCATTGGGCGTAGCAAAAGTACCTGAAGAACCAATAGCCCTTTTAAAGGATGCTTCGGAGGCTCAACTCAGCAAAGTGAAAATATGTAGAAGGAAGCAAAGTTTTCCTACTAAAACTGATTGCGGAGATGCTGCAACAGGAGCAACTAAAGTACCAGAATCAGCGACTAACTCGGACTCTGTCTGCAGTGCAATACCGGATGCGATTAAAGATAAAAAGAATTTCAAGGGCAATGCCACGGTCCTAACTGGATCTCAAAAGGATATGTCTTGTTCAAACTGTGGCACACTTACTACAACCATTTGGAGACGCAGTGCCAAGGGTGAAATGGTATGTAACGCTTGTGGCTTGTACTTTAAGCTACATGGCGTCAACAGACCACATTCGATGAGACGTGATACTATACACACGCGGCGCAGGCGTCCAAAGGAATGCGAGAGATCCAAGAAAAGAAATAAGCAACTGGCATGTTCTTCTCGCATAGAACATAAAACAGAAAATGTAAACTCCGCTGTGGAGCCAAACCAGATGGATTTTTTATCACCTGAAACTCTTAGTATATCAGATATAGTATTCAATAAATATAAGTGTGATGCCGAAGCAGCAGCTTTGAAGgatgtttttttaagaagaaataaATCGCAGATTTCTTCGGCGTTTAATAATACTACCTGCGAAACCGAGGAGTTATCAGTGCCTCTCAATCTTGTTTCCAGTGAAAGCAATACTAAGTTAACATAG
- Protein Sequence
- MCNVPLKYRQVCRLCLILRAGNICTTTTTTTTTTTEEEYNQEHSDDSSPHITIQIFNCLSIKTMPNDGFPTVICRDCRAKLKSFWMFRSMALNSHNALKDFLAVAEASKNFEPSYLEIKLDTILKSSSEAIAAKALTELSKSSKAKYTNSKLDGMMKTPSEVVYRSDQHHQQQLQSKIQAPSLYLSSFKSPAALMQSPLNKADYPAQDIVTPIDSDKQSDNRTAKSKTKDAEVEQYKNLQQQLETAAVLMDISKKIVISPPSSNPQSPCLTALADTSINSSVIKSKRPSNDNEIQDDMEIDLSVKKLKTEYPNQRNLIQMHHLCQNPILEMHANTSRTDVDNKNYSINMNEAGPSAYIKPQISKIKTENCNAACLSDLEDSSDSNKLEMDIASVINDRKTPDSVNSDHATDMATTQLWQALARSAAKNKEKTPATELLRNMMSQSFVLSVPPPLGVAKVPEEPIALLKDASEAQLSKVKICRRKQSFPTKTDCGDAATGATKVPESATNSDSVCSAIPDAIKDKKNFKGNATVLTGSQKDMSCSNCGTLTTTIWRRSAKGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECERSKKRNKQLACSSRIEHKTENVNSAVEPNQMDFLSPETLSISDIVFNKYKCDAEAAALKDVFLRRNKSQISSAFNNTTCETEELSVPLNLVSSESNTKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00337986;
- 90% Identity
- iTF_00337986;
- 80% Identity
- -