Basic Information

Insect: Chymomyza amoena
Gene Symbol: hang
Assembly: GCA_037043745.1
Location: JBAMAX010001273.1:186973-203107[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.29 27 5.9 1.0 3 23 262 283 261 283 0.93

2 19 0.36 34 5.6 3.2 3 22 389 408 387 408 0.89

3 19 0.00061 0.057 14.3 3.3 1 22 489 510 489 512 0.90

4 19 0.071 6.6 7.8 0.1 2 21 524 543 523 544 0.93

5 19 0.00071 0.066 14.1 0.2 2 23 663 685 662 685 0.95

6 19 0.002 0.19 12.7 0.1 1 23 693 716 693 716 0.96

7 19 4.5e-05 0.0042 17.9 0.2 2 23 801 822 800 822 0.97

8 19 0.00029 0.027 15.3 2.9 2 23 904 926 903 926 0.97

9 19 0.023 2.1 9.4 0.2 2 23 935 957 934 957 0.95

10 19 0.0022 0.2 12.6 0.1 1 23 970 993 970 993 0.97

11 19 0.00013 0.012 16.5 1.1 1 23 1031 1053 1031 1053 0.99

12 19 0.002 0.18 12.7 0.9 1 23 1061 1084 1061 1084 0.96

13 19 0.91 85 4.4 0.2 2 19 1092 1109 1092 1110 0.92

14 19 7.4e-05 0.0069 17.2 0.4 3 23 1190 1210 1189 1210 0.98

15 19 0.0052 0.48 11.4 0.1 1 23 1245 1267 1245 1267 0.97

16 19 0.00061 0.056 14.3 0.6 2 23 1336 1358 1335 1358 0.93

17 19 0.25 24 6.1 0.2 2 20 1378 1396 1377 1398 0.91

18 19 0.0066 0.61 11.1 0.3 3 23 1413 1433 1413 1433 0.98

19 19 6.9e-05 0.0064 17.3 2.1 1 23 1785 1807 1785 1807 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.29	27	5.9	1.0	3	23	262	283	261	283	0.93
2	19	0.36	34	5.6	3.2	3	22	389	408	387	408	0.89
3	19	0.00061	0.057	14.3	3.3	1	22	489	510	489	512	0.90
4	19	0.071	6.6	7.8	0.1	2	21	524	543	523	544	0.93
5	19	0.00071	0.066	14.1	0.2	2	23	663	685	662	685	0.95
6	19	0.002	0.19	12.7	0.1	1	23	693	716	693	716	0.96
7	19	4.5e-05	0.0042	17.9	0.2	2	23	801	822	800	822	0.97
8	19	0.00029	0.027	15.3	2.9	2	23	904	926	903	926	0.97
9	19	0.023	2.1	9.4	0.2	2	23	935	957	934	957	0.95
10	19	0.0022	0.2	12.6	0.1	1	23	970	993	970	993	0.97
11	19	0.00013	0.012	16.5	1.1	1	23	1031	1053	1031	1053	0.99
12	19	0.002	0.18	12.7	0.9	1	23	1061	1084	1061	1084	0.96
13	19	0.91	85	4.4	0.2	2	19	1092	1109	1092	1110	0.92
14	19	7.4e-05	0.0069	17.2	0.4	3	23	1190	1210	1189	1210	0.98
15	19	0.0052	0.48	11.4	0.1	1	23	1245	1267	1245	1267	0.97
16	19	0.00061	0.056	14.3	0.6	2	23	1336	1358	1335	1358	0.93
17	19	0.25	24	6.1	0.2	2	20	1378	1396	1377	1398	0.91
18	19	0.0066	0.61	11.1	0.3	3	23	1413	1433	1413	1433	0.98
19	19	6.9e-05	0.0064	17.3	2.1	1	23	1785	1807	1785	1807	0.99

Sequence Information

Coding Sequence: ATGTGCGACGCTGccgcagccacaacaacaacaacggcagcgACCACATCGACGTCGTCCACGGTGGAACCTTTGCGGTCGCGACAAAGCTGCTGTCGCCTCTGTATTGCCCCCGCTACGGAATGCATTTCCATCATCAATAGCTATGCGGCCGATAAGGAGCCGCTCTCAACCAAAATTCAAAACTGCGTTAATATTAAGATCACACCACAGGATCGCCTCTCCTTGCAAATCTGTCATGCCTGCATAAGTTATTTGAATTCATGGCAGAGCTTTAAGAATCGCTGCCTTAGCTCACAAAGCAAGCAACGCAGTTGGCTGGACACAAATAAAtccaagcagcagcaacaacatttaTTAAACTATTTGGATTTAAATAGCGCAGAAAATGTGGATCAGCAACAACATGATCAACAGCTGGAGTTGGAGGAGAATGCTGCCACGGCAGCAGAAAAGTCTTCAGCTGCTAATATATTGGATGGCATTCCCTCGCTTAAGAAACGCAAATCTTTAACAGTTTATCCACTGCCAGCCGTACCTATAAAGGATGAACCCATTGATCCGGATGAGGATTATCAAATGAAGTCCTTAGATGAATCCGACGATATGGTGGACCCGACAATGTTCCTAGAGCGTTCCGAGCATGAGGGTGATATGCCGCTCATGACGTCTGACTATGATTATAAGCCGCAGCACAGCGTAACCGCAgcggctgctgcagcagctctaCCCGCCACTGTTGTGGCCAATGTAGCTGCTGCTGGCGATTCCAAGGTAGCCTCCTGTCGCGCATGCAGCTTGCAATTCTCAACGCGCGCTAACGCACGTCGTCATGAGCGCAATTTGCATCCAAATCTGTTTCAATTGTCCACGGACTCGCCCAATAATACGCCGATTACAAAACCAACGGCAGCTCTGGCTGCTGCCTTGGAGATTCAAAGAGCAGCGGCTGCTGCGGCCACCGCAGAGGCTACGCGTGCTGCAGCCAGCGGGAATATATCCACACAAAAGTATCGTCAGGTAGTCATGCATGCGTTTATGAAATGCGAGGGTGGTGGCTTCGATTATGAAAATCCTGAGCAGTATCAGCATTTGCTCAGCAAGGACAAGTATGAGTTTATACAGCAAAATAGCGAATTCTTGGAGCAATACCAGACAATGACATGCCGCTGTTGTAACAAGTACTTTAGTACATATAAGAACTTTATGGCACATGTGCGTAAGAAGTATCCAACGTTGCCACGTAATCTATGCTTCAACTGCCTCAAAATGAATGATTCCAAAGCGCTGTTCATATCGCACTTGAAAAAACGCAACTGTATCAATCTGTACAAAGTGCTCAATAGTTTGCGTGCTAAGCAGCCAAACTTTGTGCCCGCTGATGCCATCGCGTCGGTATCTACCTCGGATACATCGGTTGTGCCGGAAAAGCTACGAGCCAAGGAGTTGCTGGTTAATAAACTATACGAGTGTAAACTTTGCCCCAAGGGCTTTCGCACAAAGCATGAATTTCGCACGCACGTTTATGATAAGCATGCCGATGTGCAGCGCAAGGATAACAACTCTATACAATGCAGTTTTTGTGGCCTGGATTTTGCCGATCCGGTGGATAGGCGCCGCCACTATAATAATATGGATTGTATAGTTCGATTGCGTTGCATGACATGCGATGCTAAGCTAGAAACTCATCAGCGCTTTCTGGATCATGTCTATCAGGATCATTTGGGCGGCATAAGCAGCGATAATGCTTCGTCGGCCAGTGGACTTGCGCGTAGCAACAGCATGGAGCATTCGCCGGGAAAACGTAGTCTTTTGGGCGCCCTGGGCATTGGTGTATCCTCCTCGAATGAGGAAtcacgcagcagcagcgccgcaCCAACGCATACCTCTACACCCAAATTGGGTAGCGGCGCTTTGCCAGCACCAGGGAATACTTCTGGTGGTGGTGGAGCACCTAAATCACAGTACTTTTCGCGCATGCCCCAAGTGTGCCCCATTTGTGGACAGCAGTACAACAACTATAATAATGTGCTGCGTCATATGGAGTCAAAGCATCCCAATAAACTGCCAGAAACCTATAAATGTGTGCGTTGCGGCCTCGGCTATCCACGCATATCCTATTTGCGCGAGCATATGATTAATGTTCACGGTGTGGACAAAAATCGTCATTCTGGCGGTTTTGAGTATATCGTGAATGCGGATGCTGTCAAATTAGCGGATGGCAGCACGCCCAATGTGTACACTGGTCGGTACGACTATGTAATGAAGGATTTGATGTCGATAACAAATGGTGGGACACTCGATGACGAGGAGGAGGAGGCCAGCGTAGCCAAAAAGATTCGTCTTGACGATAGTGGCACTGCTGGCAACAATAATTCCAGCATCGGTAACCAGCAAAAGGAATGTCCCATTTGCAATTCAGTTTTTAGCAACAATATTGGTCTATCCAATCATATGCGCTCGCATTATACAGCTTCCAGTGCCACCAATGCCGCTTTGGCAGCTGCCAATAGAATGACACCCAAGTCATTGACCATCACAGCTACCAGTTCGGCTAAGACTACACCCACACCAGCAGCGGCTACAACAGCTAAtgtaagcagcagcagcggcagccttCCACCAGCCATGGCCAATCAAACACCCCAGGAGCAGGCCGTATTTAGACGTAGCTTGGATCAAGCGGCCGATAGACGTTTCCGTCGTATGCGTTGCCGCATTTGTCAGCGTCGCTTTAGTTCCAAAAAGTCTTATCGCTATCATATGCTAACCGATCATCAAGTGCAGAATGtacaatttattaaatgcaaGCTCTGCAACGCCGAGTTCGCCTATGAAAAGGGACTCAAAGTGCATCTGTTCAAAGTACACGGTACTGTGATCAAGGATGAGATGATTATAAAGCAGTTTGAATGTGAGGTTTGCTCGATTGTATACAGCTCTGAGTTGGAGTTGCAACAGCATAAGCGCAGCGTGCATAAACATACAGTACTTAATGCTGCTGGAGGCGGCGAATCCGCTCACAATGAGTCCGCAGTTAAAGACGAAGTTGtggatacttcagctgtggctgTTATGCCACTGTATTGGTATCAATGCAAATATTGTCCATCAAATTTCAATACCAATAAGAAGCTGGCCATACACATTAACTCCCACGATGAGTTTGATTCAAATGACTATTCCTGCAAAGATTGCGGCAATGTATATAGTGGACGTAAGAGCCTCTGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCAGATCCCGCCGAATGTGTGCTCTGTCGCAAAGTCTTTTTCGATCGCCAAATGTTGGATAATCACACGCCCACATGCAACCGCAAACCAATTACTGCCACAGGAGCACACCAACAGGATGTTAATGCTTCTTCAACGATGACCACGTCGACACGtgtttttaaacacaaaactggcgatgatgatgacgaggaAGATGAGCTTATGCTGGAGGATGGTGGAAGTGAGAGTAATATCCAaggtggtggccatttggctggcACTTCGAGCAATCAGCCTTTGAAGATACGTATACCAGAAGTGGCTTGTACGATATGCGGAGCTCGTTTTACTGATCAGGAAATGTTTAGCAAGCACATACAAAAGCATGAACAAGAATTGTATACAGACAATCCTTTGGCGGCTATGTTTGACGATGGTCCTGTTGATCAAAGTCAGTTTTATGTGGAGCGACCAAATGAGAACGGGGAATATGCTTGTGACTTATGCGCCAAGACATTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAATCCCAACGACGGCGAAGCGAcacagaacaacaacagcaacaacaacacggcGAACTCGTCGATGCTGCACCTACGGGAACTGCACGCAGTGGGGTTAATGCCAAATCAACAACGTCttcacaacaacagcagctcgGGTGCAGCAACATCGAGCAAATCCCTGAAACGCAAACGTGAACTTAAATGTGAATATTGCGCCTCGACCTTTATAAGTAACAATAATCTTCGTCGTCATATGTATGAGCTGCATAAACATGAGGTTAGCAATTTACCAGAACCACCAGTTATAGAAGTGGATAAGCCATTGTCCTGCCGACGCTGTGatctcaaatttaaaacaaaggaATTGTGGATAGAACACAAATTGGCCGATGCCAAGGTAACACGTCCTTTCTGTCCATTTCAATGGGGCTGTGATTTATGTGGCGAGTATTTGTCgcgaaaagaaaaattaattaatcatatAAACAATCATTTAAAAGAGGAGGTAATAGTGCCAGTACCAGTGGTAACTAAGACTATATCAAATAAATCAGCGAGCGAGACACcaaccaacaaaaaaccaaGTAATGTAACAACAACACCGAAAAAGTTAAcaagcagcagcggcggcggcatgGTGCCTGAAAAAGGGACACCAAAAGCAGCTAATGCCACGCAGCAAGCCAAGGAAAAGCCAGTTGTAAAAAATGAGACGGAGAAAGCAACTGAAGAGCAAGAAGACACAGATGTTGATGAGGAGGATGATGAAGACAATAGCTCTGATGATGAGGATGGTGcagaagatgatgatgacagcacagatgatgatgacgacgacgatgatgatgatgatgacgacgacgatgatgaggaGGAGGAAAGCGAAAACGATCCATCATTGttgcacaacaataacaataacagcaacCACAATTTGGTTGCAGGCAGAGCTACGAATACGAATGAGCTAGAAGATGATGATCTAGTAGAGCATATTGAGGAATTGGATGATGATGTAGacgaagacgacgacgatgatgatgatgacgatgatgacgaagatgatgaagaagatGGAGATGGCGAAGGAGAAGAGCCGGTAAATCGTGGCGCAAAGTTACAGGTGCCGACGCATGTTACCTTTGATGGCATTGAATATATACGCACTAGCAAACATAAGCGTGTTAAtggcaagcaacaacaacagcaacagcgcaACAATtccaatgatgatgataagcGGGCGCATGTTGTTAATAATGAAGGACAAGTAAATAATGCTGTTAATAAAATGCATCAGGTCATAGCTGAcagtgatgatgatgaagatgatgatgaggagGAAGATGTTGATGAGGATATGGatgatgatgacgatgatgatgatgatgaggatgacgaTGAAAGTGAGTCAACAACATCGCATTCAACTGGTGAGCGgcgtaaacataaaaatatacataataaaaaaacagcagcagcagcagcagccataaATTCAAATGCTGCTGCTGATTGCAGCATTGAACAGTCTAGTAATTCCAGTTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTACAAACTCACATCAAAAGTCATTTTCTCAATGGACCGCAAGTCGCTAGCAATGGTACAAAGGCGGCAGCCAacacaacaaccaacaacacaaccaacacaacaacaacaacaacaccacaagcgtcaacaaataacaacaataaaagcaaaccGTCCTGCATGGATATGAAAAGTCCAACAGCGgctgcagcaacaactgcaaGCAATTGA
Protein Sequence: MCDAAAATTTTTAATTSTSSTVEPLRSRQSCCRLCIAPATECISIINSYAADKEPLSTKIQNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRCLSSQSKQRSWLDTNKSKQQQQHLLNYLDLNSAENVDQQQHDQQLELEENAATAAEKSSAANILDGIPSLKKRKSLTVYPLPAVPIKDEPIDPDEDYQMKSLDESDDMVDPTMFLERSEHEGDMPLMTSDYDYKPQHSVTAAAAAAALPATVVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTAALAAALEIQRAAAAAATAEATRAAASGNISTQKYRQVVMHAFMKCEGGGFDYENPEQYQHLLSKDKYEFIQQNSEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPTLPRNLCFNCLKMNDSKALFISHLKKRNCINLYKVLNSLRAKQPNFVPADAIASVSTSDTSVVPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGISSDNASSASGLARSNSMEHSPGKRSLLGALGIGVSSSNEESRSSSAAPTHTSTPKLGSGALPAPGNTSGGGGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEASVAKKIRLDDSGTAGNNNSSIGNQQKECPICNSVFSNNIGLSNHMRSHYTASSATNAALAAANRMTPKSLTITATSSAKTTPTPAAATTANVSSSSGSLPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGTVIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKHTVLNAAGGGESAHNESAVKDEVVDTSAVAVMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECVLCRKVFFDRQMLDNHTPTCNRKPITATGAHQQDVNASSTMTTSTRVFKHKTGDDDDEEDELMLEDGGSESNIQGGGHLAGTSSNQPLKIRIPEVACTICGARFTDQEMFSKHIQKHEQELYTDNPLAAMFDDGPVDQSQFYVERPNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPNDGEATQNNNSNNNTANSSMLHLRELHAVGLMPNQQRLHNNSSSGAATSSKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDKPLSCRRCDLKFKTKELWIEHKLADAKVTRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVIVPVPVVTKTISNKSASETPTNKKPSNVTTTPKKLTSSSGGGMVPEKGTPKAANATQQAKEKPVVKNETEKATEEQEDTDVDEEDDEDNSSDDEDGAEDDDDSTDDDDDDDDDDDDDDDDEEEESENDPSLLHNNNNNSNHNLVAGRATNTNELEDDDLVEHIEELDDDVDEDDDDDDDDDDDEDDEEDGDGEGEEPVNRGAKLQVPTHVTFDGIEYIRTSKHKRVNGKQQQQQQRNNSNDDDKRAHVVNNEGQVNNAVNKMHQVIADSDDDEDDDEEEDVDEDMDDDDDDDDDEDDDESESTTSHSTGERRKHKNIHNKKTAAAAAAINSNAAADCSIEQSSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPQVASNGTKAAANTTTNNTTNTTTTTTPQASTNNNNKSKPSCMDMKSPTAAAATTASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336377;
90% Identity: iTF_00336377;
80% Identity: iTF_00336377;