Camo022209.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- dsx
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010004710.1:108322-109287[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-24 1.4e-20 73.3 10.1 2 47 41 86 40 86 0.97 2 2 4 2.5e+04 -6.6 4.4 11 21 178 188 175 190 0.75
Sequence Information
- Coding Sequence
- ATGGTTTCTGAGGACAATTGGAATAGCGATACCATGTCCGATTCGGACATGATAGACTCCAAGAACGATGTTTGCGGCGGCGCCTCTAGCTCCAGCGGTAGCTCCATATCACCACGCACGCCGCCCAATTGTGCGCGCTGCCGCAATCATGGTCTCAAGATCACGCTCAAGGGTCACAAGCGTTACTGCAAGTACCGCTTTTGCAACTGTGAAAAGTGTCGCCTAACGGCAGATCGTCAGCGCGTCATGGCGCTCCAAACCGCGCTGAGACGCGCCCAGGCGCAGGACGAACAGCGCGCTTTGCATTTTCACGAGGTGCCGCCGGCGTCTACCAATGCGCTGCTGGGCTCCACACATCATCACCAGCATCATGGTCATGGTCATCATCATATTTTACACCAGCAAGGGCCACCACCGCCGCTACAACAACAGTCGCAGCATCTGGCTGCCGTCGGCGCTAGTCACAATGGGCGTGCCACGGTCGTTGCCGCTGGCGTCAACTTGCCCAATTTGCATGTACATGGACATGGCCACGTGCAACACACAACGTTGCATGGACATACACCGCATTCGCATGCCGCTGCTGTGGCTGCAGCCGCTGCAGTGCAGCAacatcatcaacagcagcagcagcaccagccaCAGCATCAGCACTTGGCTTTGCGTTCACCACCGCACAGTGAGCATGGTGGCAGCGTTGGTGCCTCCAGCAGCACTGCAGGTGGAGTTATATCCAGCACAGCTGTGGCCAGTGCTTCGAGCAGCGGTGGCGTCATAACCAGCACAGATCATCATATGTCAACAGTGCCAACGCCTGCACAATCGTTGGAGGGATCATGCGACTCACCGTCGCCATCGCCATCGTCTCCATCTGGCGCCACATTGCCGATCTCAGGGCCCGTCAATCGCAAGAATGGTGCAAATGCACCAATGGGTAAGTGCTTGGCTATAAGAATAATTAACTAA
- Protein Sequence
- MVSEDNWNSDTMSDSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRFCNCEKCRLTADRQRVMALQTALRRAQAQDEQRALHFHEVPPASTNALLGSTHHHQHHGHGHHHILHQQGPPPPLQQQSQHLAAVGASHNGRATVVAAGVNLPNLHVHGHGHVQHTTLHGHTPHSHAAAVAAAAAVQQHHQQQQQHQPQHQHLALRSPPHSEHGGSVGASSSTAGGVISSTAVASASSSGGVITSTDHHMSTVPTPAQSLEGSCDSPSPSPSSPSGATLPISGPVNRKNGANAPMGKCLAIRIIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339169; iTF_00337543; iTF_00338356; iTF_00336757;
- 90% Identity
- iTF_00338356;
- 80% Identity
- -