Cfes044189.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- -
- Assembly
- GCA_963931855.1
- Location
- OZ007556.1:92603300-92608533[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0065 1.7 11.0 0.8 1 23 114 137 114 137 0.95 2 13 0.0016 0.42 12.9 1.4 3 23 144 164 143 165 0.93 3 13 2.2e-05 0.0057 18.8 4.2 1 23 174 197 174 197 0.96 4 13 1.8e-06 0.00046 22.2 6.3 1 23 336 358 336 358 0.97 5 13 4.7e-08 1.2e-05 27.2 3.1 1 23 364 386 364 386 0.98 6 13 0.00082 0.22 13.8 1.4 1 23 392 415 392 415 0.95 7 13 3.8e-07 9.9e-05 24.3 1.4 2 23 425 446 425 446 0.97 8 13 0.00054 0.14 14.4 0.2 2 23 452 473 451 473 0.96 9 13 4.9e-07 0.00013 24.0 0.7 1 23 479 501 479 501 0.96 10 13 6.3e-06 0.0017 20.5 1.3 1 23 507 529 507 529 0.98 11 13 4.5e-07 0.00012 24.1 0.9 3 23 537 557 535 557 0.96 12 13 1.1e-06 0.00029 22.9 1.2 1 23 563 585 563 585 0.99 13 13 0.00028 0.073 15.3 0.1 1 23 590 613 590 613 0.96
Sequence Information
- Coding Sequence
- atgttGGACTTCGATATTGATAAAATGTGCAGAGTGTGCCTCCAATCAAATCTTGAGTTATATTTGCTGTTTGACGAGCAAAATGCCATCGACGGAGTCGACTTGTCCACAATGATTTCAGAAATGACAATTTTTacaatcCGAAGACATGATGATTTTCCTCATCAAATATGCTTTGAATGCATGCACAGAGTTCGTAGTGCATACGatctcaaaaaacaatttgaacaaTCTCATCGTAAACTTCTTACTTATCTAGAGGCaatgaacaaaaaaactatCGACACGACtcctgaatttaaaaatgataagtgCGTTCAAACGGAGGACTCTACATTATTTCCATGTGAAAAATGCGATGATAAATTTGTTTCCTATCGGAGCCTGAGGGAACACCGTACCGTCTCACATAAAGGGACTGCAAACATTTGCAGATTCTGTTTCAAAACATTCAACCGCATCGGAGACCTTAAGAACCACATTGCAGCGCATCATCCggaaataaaacattttaatccCCACGAATGTCTCATCTGTAATAGAAGATTTACTCGAAAGGAACATGTCAACCGACACATGGAAAAGATTCACAAAATAGAAAGTGGGCAAATGTTTGAAGATGAAGATAAAGCAAATGAAGAaatcagACCATCTGTTGATAATGAATTAGAGATGTTGATTGAAAACGAAATGGACTATGGAAATCTTACGAAGGTTGAAGATACCTCTGAAATTGTATCAAATAAAGATGCTGAAGACTATAATGATGGAAGCATTGGTGCAGCAGAAAATCCATTCAGCAGCGACGAAGATGACAAGCCATTAGCTGGTTTGCTAAGTACAATGAATGcgaaaaataaagaTTCGCAAAATGTTTCAATAAAGGTAGAGCTAGATGACAATCCCACCGTACATCCATACTGTGTtccaaaatctgaaaaaatagAAACTCCTAATAAGGATGACTCACTGGTCGTTGAGCATTCTCAAGaagtatcaaaaaaatttaaatgttcaaTTTGTTATAAATCATTTACGCGAAGCAGCCATCTTAAACGTCATTTTCTTTCGCATGTAGAGGAAAAACCATTCCCATGTAAAATCTGTGATAAGAGATTTACCCGAGCTGATCATCTCAAAAATCACATGAGCAAGCATGATAATACTAGAGCGTTTAAATGTGAAATTTGCAATCGATCTTATAATCGAGCAGATATTCTGAAACAACACAAAGAAAAGAAGCATGCTAAGGGTCAATCCGTTAAATCAGAATATTGTGAACTTTGTAATAAATCATTCAGCACTAAAGCATATCTACAAAAACACATGAGCATGCATAAGAATAAAGCTTGGAAGTGCAAGCTGTGTCCAGTAGGTTTTGAGTCCAAAGAAGCTTTGAAAGCGCACAATAAATCCCATGCTAAGGAGAAGCCATATTTATGTTCGGAATGTGGCTTGCGTTTTGTTAGAAATGATTATTTACGGATCCATATGCGAAGGCACACCGGAGAGAAGCCgtacaaatgtaaattttgtgATAAGGCATTTCCACGGACAACCGATTTAAATGTTCACGTTAAatatCATACCGGAGAGAGAACACACCTGTGTACAATTTGCGGCAAAGGTTTCCAACGATCGTACAACTTAGTTGTGCACATGCGAGTGCATACTGGTGAAAGACCATATCAATGTTCCCACTGTCCGAAAAATTTTGCACAGGGCAATGACTTAAAAGCACACATTAGGAGACATACTGGTGAGCGGTATAAGTGCGAAATATGTGGAGTTGGATTTGTACAAGGCTACCTCTTGACGCAGCATAAAATATCTGTTCATGGGGTTGAGGGCGAGGCAAGGAAAGGGAGAGTTTCTAAAGTTAAACCAAATAAACCAATCCAAGGGGTAAATTTATAA
- Protein Sequence
- MLDFDIDKMCRVCLQSNLELYLLFDEQNAIDGVDLSTMISEMTIFTIRRHDDFPHQICFECMHRVRSAYDLKKQFEQSHRKLLTYLEAMNKKTIDTTPEFKNDKCVQTEDSTLFPCEKCDDKFVSYRSLREHRTVSHKGTANICRFCFKTFNRIGDLKNHIAAHHPEIKHFNPHECLICNRRFTRKEHVNRHMEKIHKIESGQMFEDEDKANEEIRPSVDNELEMLIENEMDYGNLTKVEDTSEIVSNKDAEDYNDGSIGAAENPFSSDEDDKPLAGLLSTMNAKNKDSQNVSIKVELDDNPTVHPYCVPKSEKIETPNKDDSLVVEHSQEVSKKFKCSICYKSFTRSSHLKRHFLSHVEEKPFPCKICDKRFTRADHLKNHMSKHDNTRAFKCEICNRSYNRADILKQHKEKKHAKGQSVKSEYCELCNKSFSTKAYLQKHMSMHKNKAWKCKLCPVGFESKEALKAHNKSHAKEKPYLCSECGLRFVRNDYLRIHMRRHTGEKPYKCKFCDKAFPRTTDLNVHVKYHTGERTHLCTICGKGFQRSYNLVVHMRVHTGERPYQCSHCPKNFAQGNDLKAHIRRHTGERYKCEICGVGFVQGYLLTQHKISVHGVEGEARKGRVSKVKPNKPIQGVNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00664267; iTF_00894181; iTF_00426548; iTF_00974969;
- 90% Identity
- -
- 80% Identity
- -