Ccae040341.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963971475.1
- Location
- OZ020570.1:16579801-16583671[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-14 1.3e-10 42.6 0.1 3 44 625 666 623 668 0.95
Sequence Information
- Coding Sequence
- ATGATGTCTTTCGGTCCAAAAAAGGACGGTGGTCCTAATATTGAGTTTTTCCAATCGCCAGAATGTTTACAAGGTTTTGAAACAATACGACAATGGTTGACGAAAAACTGCAAGAAGGCCATAGCCTGCAGCACTGAACCAATCACAAAGGAGTCTTTAGCCACTCTACTTACCCAGTTTATGCAATACCATGAAAGTAAACTTGGAAAAAATGCAGCAGAAACACCAACAACAAGGATTCcaGCAAGATGTTTCCTTGATTTTACTCCAGGTGGATCATTGTGCCACATCTTTGCGAACATGTTTCGATTTAGAGCTGAGCAACGAGGtcgaaaatttgatttcagcACAACAAAAAATCCCTCACGAAAAGATCCAAACATTCAAATGATTATGGAAATTGACGCAGCTTTACTAGAAGCAGAATGTTATCGTCTACCAATTGTGTATATTAGGACGGATGTTCCTAAACCATTAGCAGCGAAATTAAAAGAGATATTGGCTAGTCGTCACGTAGAGATTGTTTCAGATGAAGAAGATGCTACGCACATTATATATCCAATTGTTGATCCATACCCAGAAGAGTATGCAAGGCCTACATTCAAACGTGGCTCAAATATTATGATGCATTGGTATTACTTTCCCGAATCGTATGATTCATGGCTGCCAAATACTTTTGATTTATTGgaCAACATTCCCGAAAATCCTCCATCTCCTTGTGATCGTTGGCGAGTTTCTGCCTCTTGGGTATTAGATCTTGAACAATATAATGAATGGATGATGGAAGAAGATTACGAAGTCGATGAGAATGGAAAGAAAAAGCTACACAAATTGAGTATATCCGTTGAGGAATTAATGTCGGTTGGAACAAGTGATGACAAGAAAAAAAGCGCCAACAAACCAAAGAGAAGGCGATCACCATCTCCTGCACCGAAAAGTGGCAAAAGGAAACGATCACCTGCTGTTTTTCAAAAGAAACCCAGGGGTGTAGATGGGGACGACGATGAAGATTTGACACGTGATATGGATGATCCACAGCCTGAGCCTAACATTCAAGAAGTAAGTAAGCCTCAACAAAGTCAATCAACAGCTAGTCCAGCACCAGCAAATTCAAAGCAAAGGGATAGTGAAATGATGCCACTCAAAGGGGGTACAGTTACTGATCTAGATGAAGAAATGGATAGAGTTGGTGGAGAAGATTCACAAACTGGTAAAACAAGTGACAACAGCAATACACAGGAATTTCCTCCCAAAGAAGATATGGAAGACAATGTCACCGAGCAAACCCATCACATCATCGTACCTTCTTACTCTGCTTGGTTTGACTACAATTCCATTCATGTTATTGAGAAGAGAGCTATGCcagaatttttcaatgcaaaaaataaatcaaagagTCCGGAGATATACATGGCATACAGGAATTTCATGATTGACACTTACAGATTGAATCCAACTGAGTATTTAACAAGTACAGCTTGCAGACGAAATTTGGCAGGCGACGTGTGTGCAATTATGCGCGTTCATGCATTTTTGGAGCAATGGGGGTTAATCAATTACCAAATTGATGCTGACTCACGTCCAACACCAATGGGACCCCCACCAACATCTCATTTCCACATTTTAAGTGATACTCCTTCAGGACTGCAACCAATCAATCCACAAAAGACACCACAGCCGTTGGCAGCCAAGTCTCTTCTAGATCTTGATAAGAAACCGAAAGAAAAGGAAGGGGAATTATTAACACCAGTTGGCGGCATTAAATTAGAAGCTGGAGTTGAAAACACAACAGGACAATTCGGTTTAAAGTTGGATCAATACGCGAAAAAACCATCTGCAATGAAAAACAAGACCGCTGCCAACATGGCAAGAGAATGGACAGATCAGGAAACATTACTTTTGCTTGAGGGACTAGAAATGTTTAAAGACGATTGGAATAAAGTATGTGAACATGTGGGAACCCGAACACAAGATGAATGTATTCTGCATTTTCTTCGATTGCCAATTGAAGATCCATATTTGGAAGATGATGGTGGATTTTTGGGTCCACTAGCTTATCAACCCATTCCATTTAGCAAGACAGGAAACCCAATTATGTCAACAGTAGCATTTTTAGCTTCAGTAGTAGATCCTCGAGTAGCTGCAGCAGCAGCAAAGGCAGCAATGGAAGAATTCGCTGCAATAAAAGATGAGGTTCCATCCTCAATTATGGACGCTCACTTTAAGAATGTTGAAAAGTCCGGGTTTTCAGGGAAATTTGATCCTTATGCTGGACTGGCCAGTAGTGGGATTGCTGGAACAGGACCGGATAAAGACGAAGAAGATGGTAATAAGACTAGTAATAGTAGTCAAGATGATGAAATGAAAGATGTTACTAAAAAGGAAGGAgAAAAAGATACACCAAAAGACAGttcaaacacaaataaatCGAAGGATTCCACTCCTACTCCAACAGAAAAGTCAAGTGAtgtcaaaaccgaaaaacctAGTGGTGACGATAAGGATGTTAAAACAGAAGAATCCTCAACAGAAAGTTCACAATCAACAGCTGCTAGTACAGAAGCAACAAATGGTTCAAAGGAAAATGGTGAAGCTAATAGGAAGATATTCAATGAAGCAAATATTCAAACAGCTGCAGCAGCTGCACTTGCTTCGGCAGCTGTTAAAGCTAAACACTTAGCTGCTCTAGAAGAACGTAAAATAAAGTCTTTGGTCGCTTTGCTTGTTGAAactcaaatgaaaaaattggaaataaaattgagGCATTTTGAGGAATTAGAAACTACCATGGAAAGAGAAAGGGAAGGTCTTGAATATCAAAGACAACAGCTTATTACGGAAAGGCAACAATTCCATTTAGAACAACTTAAAGCTGCTGAATTCCGTGCACGACAACAGGCCCATCATAGATTACAACAAGAACAGCAAGGACAGTGGCAAGTCAATACGAATACTACCAATACTCCGCCAGTTAGTTCTGCTGTGACAGCAAATCCTGGTGCAACAAACTTACCTGCAACTACACCAGCAACGACTGTTACAAGTGGTTCATCTACTCCTGCAGCACCGACCGACACTACCGCAGGCCAGCCAGCACCAGCAACTGTTGCAAGTCAACCCAGTAGCGCACCTGTCCCAACCTAG
- Protein Sequence
- MMSFGPKKDGGPNIEFFQSPECLQGFETIRQWLTKNCKKAIACSTEPITKESLATLLTQFMQYHESKLGKNAAETPTTRIPARCFLDFTPGGSLCHIFANMFRFRAEQRGRKFDFSTTKNPSRKDPNIQMIMEIDAALLEAECYRLPIVYIRTDVPKPLAAKLKEILASRHVEIVSDEEDATHIIYPIVDPYPEEYARPTFKRGSNIMMHWYYFPESYDSWLPNTFDLLDNIPENPPSPCDRWRVSASWVLDLEQYNEWMMEEDYEVDENGKKKLHKLSISVEELMSVGTSDDKKKSANKPKRRRSPSPAPKSGKRKRSPAVFQKKPRGVDGDDDEDLTRDMDDPQPEPNIQEVSKPQQSQSTASPAPANSKQRDSEMMPLKGGTVTDLDEEMDRVGGEDSQTGKTSDNSNTQEFPPKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNAKNKSKSPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHILSDTPSGLQPINPQKTPQPLAAKSLLDLDKKPKEKEGELLTPVGGIKLEAGVENTTGQFGLKLDQYAKKPSAMKNKTAANMAREWTDQETLLLLEGLEMFKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLAYQPIPFSKTGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHFKNVEKSGFSGKFDPYAGLASSGIAGTGPDKDEEDGNKTSNSSQDDEMKDVTKKEGEKDTPKDSSNTNKSKDSTPTPTEKSSDVKTEKPSGDDKDVKTEESSTESSQSTAASTEATNGSKENGEANRKIFNEANIQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQVNTNTTNTPPVSSAVTANPGATNLPATTPATTVTSGSSTPAAPTDTTAGQPAPATVASQPSSAPVPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00176324;
- 90% Identity
- -
- 80% Identity
- -