Aibi005127.4
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_958298945.2
- Location
- OY282605.1:104407234-104411374[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-14 2.5e-11 44.1 0.2 3 44 628 669 627 671 0.96
Sequence Information
- Coding Sequence
- ATGGTGTCAATTGGACCAAAAAAGGACGGCAATCCAAATGTAGAATTTTTCCAATCACCTGAATGTTTGCAAGGTTTCGAAACAATTAGAAATTGGTTGCAGAAGAACTGTAAAAAGTCCATTGCGTGTAGTACGGAACCGATTACTAAGGAATCATTGGCTCAGCTTCTAATACAATTTCTACAATATCAAGAAAATAAACTTGGAAAAAATGCTCCCGAAACACCAACTACCCGAATACCGATGCGATGTTTTCTTGATTTTAAACCAAATGGTGCTTTATGTCACATTTTTGCGAATATGTATCGTTTTCGGGCAGAACAAAGATGTAGGAAGTTTGATTTTAGCACAACAAAAAACCCATCTCGGAAGGATCCCAATATTCAAATGATTATAGAAATAGATGCCGCTTTAATCGAGGCTGAATGTTACAGACTTCCAATAGTTTTTATACGTCCAGAAGTTGAAAAGACACTAGCTGCAGAGATAAAAGAGATTTTAACTACTCGGCGTGTTGAATTTGTAACTGAAGAAGAGGAAGCTACACATATTGTATACCCTGTCATCGATCCGCATCCAGATGAATATGCGCGACCCTCGTTTAAACGTGGTTCAAATATTATGTTGCATTGGTACTATTTCCCTGAATCTTATGATTCTTGGTTGACAAATACGTTTGACTTGCAAgATAATATTCCGGATAATCCAGCAACTCCGTCAGAACGTTGGCGCGTATCTGCTTCATGGGTTTTGGATCTTGAACAATATAATGAATGGATGTGCGAGGAAGATTACGAAGTTGATGAGcaaggaaaaaaaaagttgcatAAATCGCGATTGACAGTAGAGGATCTAATGCCTAATCTGGGTGATGATAAGAAAAAGTCTGGTAGTGGCAAACAGAAACGAAGACGTTCACCATCACCTTTACCAAAAGGTGGTAAAAGAAAAAGtggtagGTCGCCagctgtttttcaaaaaaagccaAGACCCGGCGATGAAGATGAAGAGGATTTGACTCGTGACATGGAAGATCCACCAGCAGAACCAGTTATTGCGGAAGTAAGTAAACAACCAATTGGGCAGTCGACAGCCAGTCCAGCACCACCTGCTATTAAACAACGCGACAATGAAATGATGCCAATAAAAGGAGGTACTGTAACTGATTTGGATGAAGAAACAGAAAGAGGTGGAGACGATTCACAAACAGGCAAAACTAGTGACAATAGTAACACTCAGGAATTTCCTCCTAAAGAGGACATGGAAGACAACGTCACTGAGCAGACTCATCATATTATCGTACCATCTTACTCGGCATGGTTCGACTACAACTCCATTCACGTTATCGAAAAACGTGCTATGCCAGAATTTTTCAATGCGAAAAATAAGTCGAAGACGCCAGAAATTTACATGGCCTATCGAAATTTCATGATTGACACCTACAGACTTAATCCTACTGAATATTTAACTAGTACAGCCTGTAGAAGGAACTTAGCGGgtGATGTATGCGCAATAATGAGGGTTCATGCTTTTTTGGAACAATGGGGTTTGATCAATTACCAAATTGATGCTGAATCTCGCCCAACACCGATGGGGCCACCACCGACTTCCCATTTCCATATACTGAGCGATACGCCATCTGGTTTACAACCAGTAAATCCACAGAAAACGCCGCAATTACTTGCAGCTAAAGCTTTATTGGATCTAGATAAAAAGCCGAAAGAAAAAGATAATGAATCTCCAGCGACACCTGGTGGGGCCGCTCCTACAATAAAAGTAGAGGGCGTCGAGAACAGTACGGGACATTTCGGATTAAAACTCGATCAATATGCGAAGAAGCCGTCtgctatgaaaaataaaaccgCCGCAAATTTAGTACGCGAATGGACAGATCAAGAAACATTGCTTTTACTTGAAGGTCTTGAAATGTACAAAGATGATTGGAATAAAGTGTGCGAGCATGTTGGCACGAGAACTCAAGATGAGTGCATTCTTCACTTTCTGCGATTGCCTATTGAAGATCCCTATTTGGAAGACGATGGTGGATTTCTTGGTCCACTCGCCTATCAACCAATTCCATTCAGTAAGTCTGGAAATCCAATAATGTCGACAGTTGCATTTTTAGCTTCGGTCGTTGATCCTCGTGTAGCAGCAGCTGCTGCTAAAGCAGCTATGGAAGAATTCGCTGCAATCAAAGATGAAGTACCATCATCAATAATGGATGcgcattttaaaaatgttgagaaGTCTGGCTTTTCGGGAAAATTCGATCCGTATGCAGGATTAGCTAACAGTGGTATTGCTGGAACAGGACCAGATAAGGAGGACGATGATGTAACCAAATCTAATACAATTCAAGATGAAGAAATGAAAGATCTCAGTAAGAAGGAAGGAGCAGagaaagaaaattcaaatcaaacaaacaatgctgtaaataaaaagaaagaaagcaCTAATCCATCAGACAAACAATCATCAGGTGATTTGAAAACGGAGAAATCGACCATCAACGATGATAAAGATGTAAAAACGGAAGAATCGTCAACGGAGAGCTCGCAGTCAACAGCAGCCAGTACAGAGGCAACAAACGGTTCAAAGGACAATGGTGATTCAACGCGGAAAATATTCAACGAGGCTAATCTACAAACAGCTGCTGCTGCTGCGTTAGCATCTGCTGCAGTTAAAGCAAAACATTTAGCTGCCTTAGAAGAAAGGAAAATTAAGTCACTCGTAGCTCTGCTTGTAGAGACACAAATgaaaaaacttgaaattaaGCTTAGACACTTCGAAGAATTGGAAACGACTATGGAACGGGAGCGCGAAGGGTTGGAGTATCAGCGACAACAGTTAATCACTGAAAGGCAGCAATTTCATTTAGAACAGTTAAAGGCAGCTGAATTTCGTGCCAGACAACAAGCACATCATAGACTGCAACAAGAGCAACAGGGTCAGTGGCAGGCTAGCCCAAGTGCAACAGCTTCCAGTGCTGCTCCGCCATCCAATGCTGCTGCGACAGCTTCTTTAAGCAATACAACAACAACTGCAACCACAACCTCTACCATAACACAGAGTAATGCATCTGGGAATGAGAgCCCAAATACGTCATCATCGAATGTAAATGAAACAGGTACACAAGGAACATCGACGGTACCTGCACCCACAAATCAATCGAATGCAGCACCAGTTCCAACGTAA
- Protein Sequence
- MVSIGPKKDGNPNVEFFQSPECLQGFETIRNWLQKNCKKSIACSTEPITKESLAQLLIQFLQYQENKLGKNAPETPTTRIPMRCFLDFKPNGALCHIFANMYRFRAEQRCRKFDFSTTKNPSRKDPNIQMIIEIDAALIEAECYRLPIVFIRPEVEKTLAAEIKEILTTRRVEFVTEEEEATHIVYPVIDPHPDEYARPSFKRGSNIMLHWYYFPESYDSWLTNTFDLQDNIPDNPATPSERWRVSASWVLDLEQYNEWMCEEDYEVDEQGKKKLHKSRLTVEDLMPNLGDDKKKSGSGKQKRRRSPSPLPKGGKRKSGRSPAVFQKKPRPGDEDEEDLTRDMEDPPAEPVIAEVSKQPIGQSTASPAPPAIKQRDNEMMPIKGGTVTDLDEETERGGDDSQTGKTSDNSNTQEFPPKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNAKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHILSDTPSGLQPVNPQKTPQLLAAKALLDLDKKPKEKDNESPATPGGAAPTIKVEGVENSTGHFGLKLDQYAKKPSAMKNKTAANLVREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHFKNVEKSGFSGKFDPYAGLANSGIAGTGPDKEDDDVTKSNTIQDEEMKDLSKKEGAEKENSNQTNNAVNKKKESTNPSDKQSSGDLKTEKSTINDDKDVKTEESSTESSQSTAASTEATNGSKDNGDSTRKIFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQASPSATASSAAPPSNAAATASLSNTTTTATTTSTITQSNASGNESPNTSSSNVNETGTQGTSTVPAPTNQSNAAPVPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00334027;
- 90% Identity
- -
- 80% Identity
- -