Basic Information

Insect: Chrysoperla carnea
Gene Symbol: drl
Assembly: GCA_905475395.1
Location: FR997755.1:3101594-3107257[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 0.31 12.0 2.2 1 21 150 172 150 173 0.96

2 10 2.3e-07 5e-06 27.1 0.1 1 23 183 206 183 206 0.98

3 10 0.00074 0.016 16.0 0.3 3 23 220 240 219 240 0.98

4 10 4.2e-06 9.1e-05 23.1 0.2 1 23 246 268 246 268 0.99

5 10 2.6e-05 0.00056 20.6 1.6 1 23 274 296 274 296 0.98

6 10 0.00095 0.021 15.7 3.7 1 23 302 324 302 324 0.95

7 10 0.0023 0.05 14.5 0.9 2 23 331 353 330 353 0.94

8 10 0.0046 0.1 13.5 0.6 2 23 360 381 359 381 0.96

9 10 6e-06 0.00013 22.6 1.7 1 23 387 409 387 409 0.98

10 10 0.00015 0.0033 18.2 0.6 3 23 417 438 416 438 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	0.31	12.0	2.2	1	21	150	172	150	173	0.96
2	10	2.3e-07	5e-06	27.1	0.1	1	23	183	206	183	206	0.98
3	10	0.00074	0.016	16.0	0.3	3	23	220	240	219	240	0.98
4	10	4.2e-06	9.1e-05	23.1	0.2	1	23	246	268	246	268	0.99
5	10	2.6e-05	0.00056	20.6	1.6	1	23	274	296	274	296	0.98
6	10	0.00095	0.021	15.7	3.7	1	23	302	324	302	324	0.95
7	10	0.0023	0.05	14.5	0.9	2	23	331	353	330	353	0.94
8	10	0.0046	0.1	13.5	0.6	2	23	360	381	359	381	0.96
9	10	6e-06	0.00013	22.6	1.7	1	23	387	409	387	409	0.98
10	10	0.00015	0.0033	18.2	0.6	3	23	417	438	416	438	0.95

Sequence Information

Coding Sequence: ATGGAAGAAATTATTACTGATGAAATAATTGATATACCACCAATTGAATCAGAAACAATTTTAATTAAATCAGAAACAAATGATCTAAAAATTGATGAATCTGATGTTCTCGCGTCGGAGGAAATGCAAGAAGATGAGGACATCGATTTAGATGAGGAAGCTGAAGATGATGAAGAGATTTTAAATGATGGATCTGCAGAGATTACAGACGTTAAAATGATTGAATGTCCTGTTTGTAGATTGAATGTTATATCATTTATGATGGAAGAACATAAGAATACATGTTCGGGAGCAGATGAAACTATATTAGGAACGGCTGATAATTATTCAATTGAAAATGATGATGATCTCGACGAAGAAGATCGTAAAGATATTAGTTTAAATACTGAAACCGATGAGAATGGTGAGAATGATGGAGAGGACGGTGATGGCGATGAGAATAAGATTTATAAATGTCCAAATCAAGGTTGTGTCAAAGTTTACAAAAAGAAATTTTATTTAAGTCGACATTTAAAGCATACCAATTGTACGGGCACCCAAGTTAAATATGAATGCAAGGTGTGTGGTAGAGCGTATTCACGACCAGACAATTTACGGGCTCATTTAAAATCCGCTCACGTTGATAATAAACTTGTTGTGAAAGATAAATCTGTAGCTTGTCCACATTGTGATAAAGTTTTGAAAAATAAAGCAATTTTATTGGTGCATATGCGAATTCATACTGGTGAAAAACCATATCAATGTGATGTTTGTCCAAAAGCATTTCCAACAAGCGGTGCTTATCAAAAACATAAACGAGTACATACTGGAGAAAGACCATTTATGTGTCCACAGTGTAAACGTCGATTTACAGCGAAAGAAGTATTAAATCGACATATGAAAACACATTCAGCAGTGAAACCGCACGTATGTATGTTCTGCAATAAGAGTTTTGTACAAGCAATGCAGCTACGTGCGCACATGTTCCATCACACCGGTGAATATTCATGTATTTGTAAAACTTGTGGAGCTGCGTTTAGTAAACAAAATGCTCTCACGTTACACGTCAAATACGAACATGAAGGAGCGAAACCATTGGAATGTGAAGTTTGCAAGAAAACGTTTTTAACGAAAAACTTTTTGGTTCGACATCAAATTATACATTCTGGAGTGAAAGAACACGAATGTCCAAATTGCAAAAAACGTTTTATCTCGAAGCCAGCCTTAAAAACACACATGCTGACACATCGCCATGAAGAACCAAGAATCTGTTACGATTGTGGACGCGCCTATATTCGTTTAGATTGTTTAATTCGGCATATGCGTGCTAAACATCGTGACGTGCTGCAAGATATGATTGCATCAGCTGAATCGAAAAAAATCCGTCAACTTGTTCTATCCGCACAGCCACAATTGGAGAAAGGCACTAATTGGTCGGATGATTTATTTGTTGAGAATCTTAAGAAATTATTAATTATTTTAATTGATGAAGCTACATTAACGAATTTTGGATGGCCAAATCGACCAATTGATAAAATTTTGGATTCGTTAATTATACGTTGTGGTTCTGTACCCGTTAACGAAGAGAATTTAGAATTTATTGATCGATTACGTGAGAATACGAAAATTTTATTTACGGGAATTATTAACGATGATGCTCTTGAAGTATTGTTGAATAATAATACCGTGGATGAGGTTGTTAATTTTGTGTTACAATTATCCTGTGTTCCAGAAGAAACCAATGAATCGAATGATGTTAAAATACCTATTTAA
Protein Sequence: MEEIITDEIIDIPPIESETILIKSETNDLKIDESDVLASEEMQEDEDIDLDEEAEDDEEILNDGSAEITDVKMIECPVCRLNVISFMMEEHKNTCSGADETILGTADNYSIENDDDLDEEDRKDISLNTETDENGENDGEDGDGDENKIYKCPNQGCVKVYKKKFYLSRHLKHTNCTGTQVKYECKVCGRAYSRPDNLRAHLKSAHVDNKLVVKDKSVACPHCDKVLKNKAILLVHMRIHTGEKPYQCDVCPKAFPTSGAYQKHKRVHTGERPFMCPQCKRRFTAKEVLNRHMKTHSAVKPHVCMFCNKSFVQAMQLRAHMFHHTGEYSCICKTCGAAFSKQNALTLHVKYEHEGAKPLECEVCKKTFLTKNFLVRHQIIHSGVKEHECPNCKKRFISKPALKTHMLTHRHEEPRICYDCGRAYIRLDCLIRHMRAKHRDVLQDMIASAESKKIRQLVLSAQPQLEKGTNWSDDLFVENLKKLLIILIDEATLTNFGWPNRPIDKILDSLIIRCGSVPVNEENLEFIDRLRENTKILFTGIINDDALEVLLNNNTVDEVVNFVLQLSCVPEETNESNDVKIPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01061047;
90% Identity: -
80% Identity: -