Basic Information

Insect: Chrysoperla carnea
Gene Symbol: -
Assembly: GCA_905475395.1
Location: FR997756.1:71897536-71904591[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00012 0.0026 18.5 0.7 1 23 137 159 137 159 0.95

2 15 0.0056 0.12 13.3 1.1 3 23 167 187 166 187 0.99

3 15 0.00046 0.0099 16.7 0.1 1 23 304 326 304 326 0.98

4 15 5.9 1.3e+02 3.7 0.1 1 23 332 355 332 355 0.94

5 15 0.00031 0.0068 17.2 3.8 1 23 380 402 380 402 0.97

6 15 0.39 8.5 7.4 0.0 1 23 415 437 415 437 0.95

7 15 0.029 0.62 11.0 0.2 1 23 443 466 443 466 0.93

8 15 0.16 3.5 8.7 2.1 3 19 475 491 474 492 0.95

9 15 0.00037 0.0079 17.0 5.4 1 23 501 523 501 523 0.98

10 15 0.013 0.28 12.1 0.4 2 23 529 550 528 550 0.97

11 15 3.8e-05 0.00083 20.1 0.4 1 23 558 580 558 580 0.98

12 15 0.017 0.36 11.8 0.2 3 23 588 608 586 608 0.97

13 15 0.00053 0.011 16.5 0.3 1 23 614 636 614 637 0.95

14 15 0.3 6.5 7.8 0.8 1 23 651 673 651 673 0.96

15 15 0.0071 0.15 12.9 0.1 1 20 1072 1091 1072 1094 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00012	0.0026	18.5	0.7	1	23	137	159	137	159	0.95
2	15	0.0056	0.12	13.3	1.1	3	23	167	187	166	187	0.99
3	15	0.00046	0.0099	16.7	0.1	1	23	304	326	304	326	0.98
4	15	5.9	1.3e+02	3.7	0.1	1	23	332	355	332	355	0.94
5	15	0.00031	0.0068	17.2	3.8	1	23	380	402	380	402	0.97
6	15	0.39	8.5	7.4	0.0	1	23	415	437	415	437	0.95
7	15	0.029	0.62	11.0	0.2	1	23	443	466	443	466	0.93
8	15	0.16	3.5	8.7	2.1	3	19	475	491	474	492	0.95
9	15	0.00037	0.0079	17.0	5.4	1	23	501	523	501	523	0.98
10	15	0.013	0.28	12.1	0.4	2	23	529	550	528	550	0.97
11	15	3.8e-05	0.00083	20.1	0.4	1	23	558	580	558	580	0.98
12	15	0.017	0.36	11.8	0.2	3	23	588	608	586	608	0.97
13	15	0.00053	0.011	16.5	0.3	1	23	614	636	614	637	0.95
14	15	0.3	6.5	7.8	0.8	1	23	651	673	651	673	0.96
15	15	0.0071	0.15	12.9	0.1	1	20	1072	1091	1072	1094	0.93

Sequence Information

Coding Sequence: ATGGAGGAAGGTTTTAATATAGCTTGGGATGATGGCCCAACCGTTGGCCATTTGGGTATGTGTGAAGAAGTAGTTGTACAAGATATTGATAATGATGGTATCGAAGTTGATGAAGGCGACACAGAGATTTTGTATATGCAAGAGGATGGAGAGAATGATGAAAATGTTGTTTATATGCATTCAGACGAAGTACTTGTTGATCAAACTGAAGAAATAGCTATCACTGAAGATGGTGGTTATATTGAGTGCCAAGTTGCTGAGGAAGTTATTACTGATGATTGGGCCAATCCTCAGAACGATGATAGAGTTGAAATTGTGGGAGAATTCACAGAAAGTCGAGTAGACGGTACTGATGACATAGAAATCCCATTACCCACCGATCAAGATGAATATACAACAAGTCGACCGTATCCGTGCGACTTTTGTAGTCGTCGTTTTCGTAAAAAAGCCAATTTAATGAATCACATGGTTGCACATCAAACAGACCGACCACATGGATGTAACCTATGCGGAGCGCGATATATTCGTAAATGTGATTTAATGAATCATTTAAAAATTCATGCGTACGTACCTGAACCTGAAGCTTACGAAGATGAAGAAGAAGACAATGATATTAATTATCAATTGGAAGAATCTGATAGTGAACGCCCTCGTAAACGAAAGTCAAATTCGAAAAAGAAGAAAAGTAGCAAAGTGAAAGTGAAACAGGAGGTTATCGAGGAAGAAAAATATTCAGTCCCATCTAGATCCTATGATTACGTGGATGAAGACATGAGATTACTTACTGAAATGGCAAATAGTTCAGCGCGTACCCTTGAGTATAGTAGTCCTGAGTATAATGATATATTACCTCCTGAAAATCACCCGATTAGCGAACCTAGGTATCCAATAACTGATCCTAGGAAACCTTTTGTATGCCAACATTGTGGTGTAGGGTTCGCTCGAGAGAAAGCATTAGCTTCTCATGCTCGAATTCATGGAGGTGATAGTCCATTCGAGTGTGAGACCTGCAACGATATGTTTTGGGATATTGCTCTGCTTAAAGAGCATGTTCGAAACAAACATGGTGATTTGGCTTTAGATAATTACGACGATGATGACGAAGATTACGTCGAGGAAGAAGAACGCTATGGTGATTATTTTTGTCAAACTTGTGGTATGACATTTCATCGTCAAGATTTACTTAAACGGCACAGTCGTATTCATGTAAAAGAGGAATATGTAAATGATTCTGAATTTGGACATGTGTGCAATGTATGCGGTGATTCATTCCCAGAGGCCTTAGATTTGTTAGCGCATGCAGAAGTACATGCTAGATTAGATATTCATCGTTGTATGTTATGCGGTGAAAGTTTTGCACAAGAACAGGCTATGGCTACACATATAGCTCAACGTCATGGCAAAAATATGCCACCAAATTCATGTATGCTGTGTGGTAAAACTTGTAAAGATCGCAGAACGTTGTTAAAACATTCTTGGGAGCATTCCAGGGAGAAAACATTTTCATGTTCGAAATGTACGAAAAGTTTTCATAACAAGGCACGTTTAAGGCGCCATATGTTATCACATCGGAACAAATCTGTTACATGTAATGTATGTGGTGAAGATTTCCCCGATGGCAGAAGTTTAATGAATCATCGACATAGTCATACAAATATGTCAGGGCGACAATTTCCTTGCAGAGAATGTGGGAAAACATTTGGATCACGTAGTTCACAACAAATTCATATTCGAATACATACTGGTGAAAGACCATATGGATGTCGATTTTGTTGGAAAGCTTTTGCTGACGGTGGGACATTGCGTAAACATGAACGGATACATACAGGTGAAAAACCGTATGCGTGTGCAGTATGTCCTAGAGCTTTTAATCAACGAGTGGTACTTCGTGAACATATACGATCACATCATTCGGGCCCTGATCCTAAGTATGGTACAACAATGACTCCATACTGTTGCTCTGTATGCAGTGATCTTTTTTCAACGTCGCAAGATCTAATTGTACATTTAATACAACATTGCGATTTGAATACGGCGATGAAACGCCAACCGCAAGTGGGACCACGTAAATATAAACGTCGTAGAAAATTAAAACCGCACGAATTAGAACGATTATCAAATCGTATGGAACGAGATGATATAGACGATATGTTGTCTGATTCGGATGATAATACTAAACGTAAATTAGGTCGCAAAAATAAGAAACCTAAACCTCAAATTGAAGAGAATTATGAGTCAGTATTTAAAAGTTTTGAGTCTGCTGTACAGACAATAAATAATTTAGTAAATTCAAAACCAAGTGGAACTAGAGGACGCAAGAAAAAAGTTACCAATAATAGTGAGTCTCCACAGACATCAGTGCCATCTCGACCAAAAATGATTCACACTCAAAAAACTCGAGTAGCTGTTGAAGTAAGTTCAGGTGACGGAAGTAAGGTGCGTCACAAAACTAAAACGCTAATAACACGAACAACTCCGGCGGTTGTCACGAATACAAATGAAAAAACTACACCAGAAAAAAATGGCGAACGAAACCGTCCACGTACTAAAAATGTTAGCTATCATGTACTTCAACCAGAAAAATATCCAACAGCTACCTTCGAACAATATAAACAAGAGACGATCGAAGATGTGATACCAATGAAAACTGAAACAAATATTATGGTGAAATCAGAACCAGAATCTCGGCGTGAAAACTACATGGATCTAGAAGAAATGTTTTATCACATGAATAACGATTATGGTGAGAGTGAAGAACAAACTGCACTTGGTATTGATGGCGATGGTAACTTTCATGTTGCACAAAACATTGAAGTCAGTGAAGAAGTTGTTCCTGAAGTTGAAAACGAAGAAGTATGTATCGAAGAGCAAGTTGAAAATGAGGAATATCTTGAAGAGGAGAATACCGAAGAAATTACCGATAATTACATACAGTACCAACAAAAAATTGATACGGGGGAAACATCGGAGCAAATGAATATTGAACATATACCAAACAACATGGATCAAATTGAACATGGTGATGATTATGGGGAATCAGTTTTACCCGATTCCTTAGCGGTCCATCAAGAACAACAACAACATTTCGAATCAACAATACATCATCAACAGCCCACGCAACAGAATCATCAAATTAATGTAAAAATGGAACCATTAGAATCGAGTTCACTGTATGAGTTGGCTGAATTATCGATGCAACATGCGCAGAATAAGTTTAAATGTGAAATGTGTAGTGCAACTTTCTCCGATAGAGGACAGTTATTATTACATGTTCCAGTGCATATCTGA
Protein Sequence: MEEGFNIAWDDGPTVGHLGMCEEVVVQDIDNDGIEVDEGDTEILYMQEDGENDENVVYMHSDEVLVDQTEEIAITEDGGYIECQVAEEVITDDWANPQNDDRVEIVGEFTESRVDGTDDIEIPLPTDQDEYTTSRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYIRKCDLMNHLKIHAYVPEPEAYEDEEEDNDINYQLEESDSERPRKRKSNSKKKKSSKVKVKQEVIEEEKYSVPSRSYDYVDEDMRLLTEMANSSARTLEYSSPEYNDILPPENHPISEPRYPITDPRKPFVCQHCGVGFAREKALASHARIHGGDSPFECETCNDMFWDIALLKEHVRNKHGDLALDNYDDDDEDYVEEEERYGDYFCQTCGMTFHRQDLLKRHSRIHVKEEYVNDSEFGHVCNVCGDSFPEALDLLAHAEVHARLDIHRCMLCGESFAQEQAMATHIAQRHGKNMPPNSCMLCGKTCKDRRTLLKHSWEHSREKTFSCSKCTKSFHNKARLRRHMLSHRNKSVTCNVCGEDFPDGRSLMNHRHSHTNMSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYGTTMTPYCCSVCSDLFSTSQDLIVHLIQHCDLNTAMKRQPQVGPRKYKRRRKLKPHELERLSNRMERDDIDDMLSDSDDNTKRKLGRKNKKPKPQIEENYESVFKSFESAVQTINNLVNSKPSGTRGRKKKVTNNSESPQTSVPSRPKMIHTQKTRVAVEVSSGDGSKVRHKTKTLITRTTPAVVTNTNEKTTPEKNGERNRPRTKNVSYHVLQPEKYPTATFEQYKQETIEDVIPMKTETNIMVKSEPESRRENYMDLEEMFYHMNNDYGESEEQTALGIDGDGNFHVAQNIEVSEEVVPEVENEEVCIEEQVENEEYLEEENTEEITDNYIQYQQKIDTGETSEQMNIEHIPNNMDQIEHGDDYGESVLPDSLAVHQEQQQHFESTIHHQQPTQQNHQINVKMEPLESSSLYELAELSMQHAQNKFKCEMCSATFSDRGQLLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01061052;
90% Identity: iTF_01061052;
80% Identity: -