Basic Information

Insect: Chrysoperla carnea
Gene Symbol: Hr39
Assembly: GCA_905475395.1
Location: FR997755.1:55341373-55357514[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3 2.4e+04 -10.6 13.3 54 148 252 275 157 374 0.54

2 3 1.2e-07 0.00093 19.1 0.1 1 19 444 462 444 469 0.92

3 3 6.2e-74 4.9e-70 237.4 0.9 158 408 494 768 474 768 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3	2.4e+04	-10.6	13.3	54	148	252	275	157	374	0.54
2	3	1.2e-07	0.00093	19.1	0.1	1	19	444	462	444	469	0.92
3	3	6.2e-74	4.9e-70	237.4	0.9	158	408	494	768	474	768	0.83

Sequence Information

Coding Sequence: ATGGCATCAGCCGCGGGAGCGGCAGATCTGCGTTCAACTAACGTATCGGTGACTGCAATCAATGTGGACAACACCGACTATTATAAAACAAGTAGTACATCATCAATAAATGGAGTCACCGTAAATATAACTGACAGTGGTTCAAGTGTTGAACGATCTTCCTTAAATGAACAACATAGTGGAGTTTTGACTCAGCATAGTAGAGGAAAGGATACAGTTAACGTTAATGTTATTACAGAACATTCGACTTCGCGATCTACCTTAAATAGACATAGTGATTCTGATTCAGAAGTTGCACAAATCGACTTTCAGAGTACAAATGTCAATTTACGACCTAAAAATGGAGAAGGAAAGAAGCCAGAAATTCCTCGACCGATGTCATGGGAGGGTGAATTATCAGATGGTGAGAGTACAATGTGTATTGACGAAGATTCAATACATTTAATTGAAAATACACAATATATAATACCAGAAAACTTAAGTACCGCTTGTAATATAAGTACTAAACATCAATCATCACAACAACCATTCACACCCTTATCATCAAATCCAACAGCTGTACGTTTAAAACAACCTGCACCACCGCCTCCGCCCGTGGGTGGTTACTCATTACATAGTACACCATCCCATTCACCGTTATTAAGCCAACGGCCCTTGGGTCATCGTCAATTGAATGTACCTCCAACGCCCAGTCCTGATTCAGCTATTCATTCTGCATACAGTGTATTTAGTTCACCCAGCCAATCTCCAATAACACAAAGACATGTCACATCCTCACTATCAAGAAATAATAGTGACGCATCGCATTCCAGTTGCTGCAGCTATTCGAGTGTTTCTGTTTCGCCAACGCAACAATTTTCTCCTACACATTCCCCCATTCAGGGCCGACATACACAACATATACACAGTAGTCCGTTACATCATAATGCAATATATAGAAGTATACAAGATATTGAACATGCAAGTCTGTATGGAACCCCAAATCACAGACATAGCAGCAATGAATTGAATGGTGAAACTGATATAGGGCAACTTGATGAAATTGATGATAAAACTGGTATTTCGCAATCAACATTACAAAATACCCAGGGTATATCCAGGCAGCAATTAATTAACAGCCCTTGTCCAATATGTGGTGATAAAATTTCGGGCTTTCATTACGGAATATTTAGTTGTGAATCTTGTAAAGGATTTTTTAAACGTACTGTTCAAAATCGTAAAAATTATGTGTGTTTACGTGGTGCCTTGTGTCCAGTCACAGTTACAACACGAAAAAAATGCCCAGCATGTAGATTTGATAAATGTTTACAATGTGGCATGAAATTAGAGGCAATACGTGAAGATCGTACAAGAGGTGGAAGATCTACGTATCAATGTTCATATAGTATACCCCCATCATTGGCTGGATTAAGTGATTTACAGGCAAGTCCTGGCAGTTTAGGTTCTGTTAAGTTAGAACCAACTGACATATCAAATTCAAGTTCACCATATTCGTCTCAAAAACGCCTTGCGGTTCCATCATTATTACAGGAAATAATGGATGTGGAACATTTATGGCATTATAATGAAGTAGAATTAACAAAATTGAGTAATGAAAGATCATTAGGCAGGACATCAGCATCAGGTGGTTCCAGTAATCCAGTTGTTGGTTTATCAACAAATCCATTACTCATGAATACAAAATTAGCTGCAAATGCTAATGATGAAACAAATTCTGATTTCTTACAAAATTTGTGCAATATTGCTGATCATAGACTTTATAAAATTGTCAAATGGTGTAAAAGTTTACCGCTGTTTAAAAATATTTCTATTGACGATCAAATTTGTTTGTTGATAAATTCATGGTGTGAATTATTATTATTTTCATGTTGTTTTCGGTCAATTTCTACGCCAGGTGAAATAAAAGTTTCACTTGGCAAAAGTATTAATCTCGCGCAGGCACGTGAGATGGGTTTACAAGCATGTATAGAGCGTATGTTAAATTTTACAGAACATTTACGACGATTACGTGTCGATAAATACGAATATGTTGCAATGAAAGTGATTGTGTTACTTACTTCAGATGCATCTGAATTAAGAGAACCTGAAAAGGTACGTGCTTCACAAGAAAAAGCACTGCAAGCCTTACAAGCATACACATTAGCGCACTATCCAGATAGTCCTGCAAAATTTGGTGAATTACTTTTACGAATTCCTGATTTACAACGAACTTGTCAAGTCGGCAAAGAAATGTTATCTATAAAATCAAAAGAAGGCGAAGGTCCCAGTTTCAATTTACTGATGGAATTATTGCGTGGTGATCATTAA
Protein Sequence: MASAAGAADLRSTNVSVTAINVDNTDYYKTSSTSSINGVTVNITDSGSSVERSSLNEQHSGVLTQHSRGKDTVNVNVITEHSTSRSTLNRHSDSDSEVAQIDFQSTNVNLRPKNGEGKKPEIPRPMSWEGELSDGESTMCIDEDSIHLIENTQYIIPENLSTACNISTKHQSSQQPFTPLSSNPTAVRLKQPAPPPPPVGGYSLHSTPSHSPLLSQRPLGHRQLNVPPTPSPDSAIHSAYSVFSSPSQSPITQRHVTSSLSRNNSDASHSSCCSYSSVSVSPTQQFSPTHSPIQGRHTQHIHSSPLHHNAIYRSIQDIEHASLYGTPNHRHSSNELNGETDIGQLDEIDDKTGISQSTLQNTQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGALCPVTVTTRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSIPPSLAGLSDLQASPGSLGSVKLEPTDISNSSSPYSSQKRLAVPSLLQEIMDVEHLWHYNEVELTKLSNERSLGRTSASGGSSNPVVGLSTNPLLMNTKLAANANDETNSDFLQNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISTPGEIKVSLGKSINLAQAREMGLQACIERMLNFTEHLRRLRVDKYEYVAMKVIVLLTSDASELREPEKVRASQEKALQALQAYTLAHYPDSPAKFGELLLRIPDLQRTCQVGKEMLSIKSKEGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00238946;
90% Identity: iTF_01060771;
80% Identity: iTF_00332393;