Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: zfh1
Assembly: GCA_014858695.1
Location: JACGTJ010002346.1:1271-9024[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00014 0.0077 16.6 0.7 1 23 201 223 201 223 0.95

2 15 0.046 2.5 8.7 1.2 3 23 231 251 229 251 0.95

3 15 0.00015 0.0082 16.5 0.3 1 23 437 459 437 459 0.98

4 15 0.0015 0.082 13.4 0.3 1 23 465 487 465 487 0.99

5 15 1.6e-05 0.0009 19.6 2.8 1 23 519 541 519 541 0.98

6 15 0.012 0.66 10.5 0.3 1 23 560 582 560 582 0.94

7 15 0.0082 0.45 11.1 0.5 1 23 588 611 588 611 0.98

8 15 0.38 21 5.8 0.4 5 19 622 636 619 637 0.91

9 15 0.00023 0.012 16.0 5.6 1 23 646 668 646 668 0.97

10 15 0.05 2.8 8.6 1.7 2 23 674 695 673 695 0.97

11 15 7.1e-05 0.0039 17.6 0.2 1 23 704 726 704 726 0.98

12 15 0.0067 0.37 11.3 0.2 3 23 734 754 732 754 0.97

13 15 8e-05 0.0044 17.4 0.5 1 23 760 782 760 783 0.95

14 15 0.0023 0.13 12.8 0.0 1 23 793 815 793 815 0.97

15 15 0.019 1.1 9.9 0.0 1 20 1424 1443 1424 1446 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00014	0.0077	16.6	0.7	1	23	201	223	201	223	0.95
2	15	0.046	2.5	8.7	1.2	3	23	231	251	229	251	0.95
3	15	0.00015	0.0082	16.5	0.3	1	23	437	459	437	459	0.98
4	15	0.0015	0.082	13.4	0.3	1	23	465	487	465	487	0.99
5	15	1.6e-05	0.0009	19.6	2.8	1	23	519	541	519	541	0.98
6	15	0.012	0.66	10.5	0.3	1	23	560	582	560	582	0.94
7	15	0.0082	0.45	11.1	0.5	1	23	588	611	588	611	0.98
8	15	0.38	21	5.8	0.4	5	19	622	636	619	637	0.91
9	15	0.00023	0.012	16.0	5.6	1	23	646	668	646	668	0.97
10	15	0.05	2.8	8.6	1.7	2	23	674	695	673	695	0.97
11	15	7.1e-05	0.0039	17.6	0.2	1	23	704	726	704	726	0.98
12	15	0.0067	0.37	11.3	0.2	3	23	734	754	732	754	0.97
13	15	8e-05	0.0044	17.4	0.5	1	23	760	782	760	783	0.95
14	15	0.0023	0.13	12.8	0.0	1	23	793	815	793	815	0.97
15	15	0.019	1.1	9.9	0.0	1	20	1424	1443	1424	1446	0.93

Sequence Information

Coding Sequence: ATGGATAATCATGGCTATGGTGGTATGCAGTGGATACAGCACCACACCAGTAATCACTCTTCTTCCCATACGGGCGATATGAAAACTGCTGGTCAGTTATTAATAGATCCTCAGCCTCCGCGTGCCGAAGATCTTATGGCCAGTGCTGTAAATTCTTCATCAGATTTTATGACCACAGAAGATGAAACGGATTCAGCGACTATAGCACAAATAGCAGCAGAAAATCTTATTTTTATGGCCCGTGATGGCCAGATGGTAACGGAAATAATAACAAATGCAACTACCGATACAAATGGAACTGTAGTTGTGACCGCCAGTGATGGTGAACAAATCGATTGTGATACAATTATGGAACAAGCGGCCTTAATACAACAACATGAAGATGCTGGTGGTGGTGGTGTATATAGTGTAAGTGATTTTACCGAGAATACACCACAAATGGTGACGGAAGAGGTCATTACCGATGATTGGGTGCAACATCAAGGTGAAGAGAGAGTTGAAATACCTGCCGAACAAATTATAGGCTCGAGTTCCCAAGTATTGCTAGACATTGAAGTACCTCTACCAACGGTACAAGATGAATATACTGCCCTTAGACCTTATCCTTGCGATTTTTGTAGTAGACGTTTTCGTAAAAAAGCCAGTCTGATGAATCATATGGTCGCTCATCAAACAGATAGACCACATTTATGTAAATTATGTGGTGCCCGTTTTCTAAGAAGACAAGATCTTATCAATCATTTAAAAGGACACGCTGAAGAGCCAGCCGAACCACAAATGGATGATACAGACTTTATACATTTTGTTACCGATACAACTACCTCCCCCCAACGCACATCCAATGATCATTATTATGAACAAGATTGGAGTGTTCCTGAAGATTCGGTTACTATACCAACAAAATCTAGTCGAAAACATAACCAACAGCAGCAGCAAGAGCAAAAACAATTACAACATATTACCTCTATTTCTAATCAATCCATTATGATGGAAAATACTATAGTAACTACATCTTCCTCTCCTGCAGATATTTTAACGGCATCAACAACACAAACTACAACAGCACCACCTAGAGGACGTATAAGTCGCCTTAAACCTAAAGAAGATACTTCATATGTTGTCGAGGTTGCTAATAATTGCCCTTCGGGGGAAATGATAATTTCATCAGCATATAGTATTGTGGAATGTGATACTTTATCTGCTAATACAGCAGCTGTTAAACTATCGCAGGATAATAATACACCCGCATTGCAAGAAAACGATGTACAAAATGTTTTGCATTATCCTATAATTGATGATAGCAAACCATTTGTTTGTCAACAATGTGGTTTGGCTTTTTCGAGGGAAAAGGCAATGTTAGCGCATACTAAGACTCACCGTAACGAATCACCATACGAATGTCCTACATGTAATGAATTATTTTGGGATCAAAATAGTCTACAAGATCATCAAAAGACGCATCAGTTTGAAGAAAGTAATTCAGAATATGATCCTAATGAAGGTGAAGATGAAACACAAACCGAATCTGAGTCCGAACAACAATTGTATGGTGAATTTTATTGCAGTGAATGTGGTATGTCTTTTCATCGTCAAGATCTCTTAAAGAGACACGCCAAAAGTCATCCAAAATGTAATACAACAGCAGGCCAAACGAATGTAGACAGTAGAGATCAACAGCACTGTTGCAATACATGTGGAGAAACATTTGCAGAAGCTTTAGATTTATTAGCACATGCTGAAATACATGCTCGTTACCCGCCCTTTAAATGTGTGTTATGTGGTGAATCGTTCTTCGAAGAACCAACCATTAAGAAACATTTACAAACCCAGCATCCCAATGAAATTACCGAAAATTCTTGTATTCTTTGCGGTAAAGAATGTCGTGATCGTAAAGCTTTAATGAAACATGCCTGGGATCATTCACGAGAAAAATGTCATTCTTGTTCAAAATGTGGAAAAAACTTTCATAATAAAGCGCGTCTAAAACGTCACATGGCATCACATCGTGATAAATCCGTGCAATGTGATGTTTGTCATGAAGAATTTCCCGATGGTCGTACTCTATCCAATCATCGCCATTCTCATAGTGCTACATCGGCGGGAAAATTATTTCCCTGTCTCGAATGTGGTAAAACATTTGGTTCTCGCAGTTCCCAACAGATTCATGTACGCATTCATACAGGTGAACGACCTTACGGTTGTAGATTCTGTTGGAAAGCATTTGCTGATGGTGGTACTTTGCGAAAACATGAACGTATTCATACAGGAGAAAAACCTTATGCTTGCTCGGTATGTCCTCGTGCCTTTAATCAACGTGTAGTTTTAAGAGAACATATACGTTCACATCATTCGGGTTTGGATGCTAAGAGGGGTACATACTATTGTACTGTTTGTGGTGCTGAGTTATCGTCTTCGGGTGATTTGATACAACACTTAATACAACATAGTGATATGAATACAGCAATGCAAAGGCAACCTGTGACTGGTCCAAGAAAATATAAAAGACGTCGCAAATTGAAACCCCATGAATTGGCTCGTCTAAAGAATGATGGTCAAAATAATGGCGGCACTGGAAGTGATATAGATTTATCTGATTTTGATATCGACAACGTAGATGATTTATTAGCAATGACTACAGACAGTAACACTGCCACCGAATCAGTAACAAATGTACAAGATTCACAAACAAAAACTTCTCTAACTGGTAAATCCACAAAACGAAAACAAGTTGTTTCTTCGGGTATTTTATCAAATGAAAGCAATAACACTAATAATAAGAATAAGTTAAACACAAACAAAATAAATAAGTCGCCATTAACAGCCCATCTTTTAGAAGATCAAGAAGATTTTGATTTAGATGTGGGCATGGATGAGTCGATAATTAAAAAACAGCGTTACAACTCTACAAGCAGTGATAAAATTTGGCCTACAAAACAAACCGAAGATACATACAAATCATTGTTAACGAATTTGGAAACAACATTACAAACGATAGATACTTTGGTGGTGGGGCCCTCGACAAAAGTAGAAAATATTTCTGCGGAACAGCAGAGTAAGCAAACAAAACGTAAGATTAAACAGGAGACTACATCTACAGCCCAAAGAACGCAACAAGTACAACTCAGTAGAAATGATAAAGAAATCACAACGACTGCCACAGGCAAAGGACGTAAAACTAAAACTATGGCGACTAAGCAAACCAAAGGACCACAAATGATTCACACCGAGAAAACTATAATAACAACAAATGATGCAAGTTTGAGAGCAGGAGGAAGTACGGGTAAAAAGAAATCTAAATCTATAATAACCCGCACACAAACCACAAATACCGATTTACTGCCTAAAACTTCGGCTATAGTCGATGATTACGATATAATATCTCCTGCCTTACAACCGCCCAAGCAAATAAGTTCTAGTCCCTTGCACATTAAACAGGAACAAGACAATCATAATAGCTATCAACACCACCAACAGCAGCAACAACATCATTTAATGAAAAATCCTCCCAGTTCTAACCATCATAATTCTTCGGCACGTACACAACCTAATACCCGCCACACAAATGCCACTGATCTCTATGATGCCCATCTTTTGTTAGAGGCTTCTTGTTTGCGCAATGATCTAGATGAATTTCTACGATCTCCTTCAAAATCAGATAAATCTCGTCAACGTTATACCAGTGAATCCTCAACACAGTTTCTAGCCGAACAATCTGAAGAAGAACAACATTTGATAAAAATTGAACCCACTTCTCCGGATCTAAGAGAAATTGTAAATGGTGCTAGTTCCGTAAATACAGCAGCAGCACAAGCTGACTTAGTTGAGTTAGAAGTAACAACCACTAAAAATCGTAATAGAAACAATAAATCTTCGAATCGTTCTCAAAGATCTTCAAATTCTAATCGTAAATATTTGGAATTTACAGGAGATTTAAGCCATTCAGAAAGTGCTATTGCCAATAAAAGATTACCCGAAAATTTATTACAACCTCAGCACTCATCGACTCTTAACATAAAATCCTCCAAATCTGCTGCACGTACAGAACCAGCAAAATCTTTAAAATCCCTACAAAACACGGCGAACACAACAGCTTCTTATTTAGATTATACTATAGTGGATGATACATTTAATGCGGTAACAAGTTCCTCAGCTAACAATAATAATTCATTTTCTTCTATATCGGCAGTGGTATCAGCCGCTGATGCTTCTGCTGCTGCTGCACAACAAAATAATTCTGCAGCGGCTGCTGCACGCAAACCTCAACGTTATTTCGAATGTGAAATGTGTAGCGCTATATTTTCAGATCGTGCTCAACTATTGGATCATGTGCCCATACATATTTAA
Protein Sequence: MDNHGYGGMQWIQHHTSNHSSSHTGDMKTAGQLLIDPQPPRAEDLMASAVNSSSDFMTTEDETDSATIAQIAAENLIFMARDGQMVTEIITNATTDTNGTVVVTASDGEQIDCDTIMEQAALIQQHEDAGGGGVYSVSDFTENTPQMVTEEVITDDWVQHQGEERVEIPAEQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPAEPQMDDTDFIHFVTDTTTSPQRTSNDHYYEQDWSVPEDSVTIPTKSSRKHNQQQQQEQKQLQHITSISNQSIMMENTIVTTSSSPADILTASTTQTTTAPPRGRISRLKPKEDTSYVVEVANNCPSGEMIISSAYSIVECDTLSANTAAVKLSQDNNTPALQENDVQNVLHYPIIDDSKPFVCQQCGLAFSREKAMLAHTKTHRNESPYECPTCNELFWDQNSLQDHQKTHQFEESNSEYDPNEGEDETQTESESEQQLYGEFYCSECGMSFHRQDLLKRHAKSHPKCNTTAGQTNVDSRDQQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEEPTIKKHLQTQHPNEITENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAKRGTYYCTVCGAELSSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHELARLKNDGQNNGGTGSDIDLSDFDIDNVDDLLAMTTDSNTATESVTNVQDSQTKTSLTGKSTKRKQVVSSGILSNESNNTNNKNKLNTNKINKSPLTAHLLEDQEDFDLDVGMDESIIKKQRYNSTSSDKIWPTKQTEDTYKSLLTNLETTLQTIDTLVVGPSTKVENISAEQQSKQTKRKIKQETTSTAQRTQQVQLSRNDKEITTTATGKGRKTKTMATKQTKGPQMIHTEKTIITTNDASLRAGGSTGKKKSKSIITRTQTTNTDLLPKTSAIVDDYDIISPALQPPKQISSSPLHIKQEQDNHNSYQHHQQQQQHHLMKNPPSSNHHNSSARTQPNTRHTNATDLYDAHLLLEASCLRNDLDEFLRSPSKSDKSRQRYTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGASSVNTAAAQADLVELEVTTTKNRNRNNKSSNRSQRSSNSNRKYLEFTGDLSHSESAIANKRLPENLLQPQHSSTLNIKSSKSAARTEPAKSLKSLQNTANTTASYLDYTIVDDTFNAVTSSSANNNNSFSSISAVVSAADASAAAAQQNNSAAAAARKPQRYFECEMCSAIFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00922285;
90% Identity: -
80% Identity: -