Cruf010408.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysomya rufifacies
Gene Symbol
ftz-f1
Assembly
GCA_014858695.1
Location
JACGTJ010002381.1:4131-35586[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.37 3.2e+03 -2.9 1.6 115 164 25 73 6 97 0.44
2 7 0.48 4.2e+03 -3.2 5.4 83 113 202 232 160 293 0.39
3 7 2 1.8e+04 -13.5 25.7 43 194 210 359 189 380 0.46
4 7 2 1.8e+04 -15.3 34.2 23 189 296 463 289 489 0.54
5 7 2 1.8e+04 -15.8 30.8 32 164 356 504 338 540 0.53
6 7 1.4e-19 1.2e-15 57.8 0.7 1 76 720 796 720 820 0.67
7 7 2.8e-72 2.5e-68 231.4 2.0 155 408 903 1149 879 1151 0.91

Sequence Information

Coding Sequence
ATGGAAGATTTCTCAACGCCCCTATTGGCGGATAGTGCAACAAACTATAATCATCACAGAACTAGCAATAACAACAATAATAATAATAATTCCATAACAAACAATAACAATATGCATCATCATAAAGATCATATGTTAGCAGCGGGTAGCACACCCAGTACTACATCTTTTATTTATGAAACACCACCCAATTCTACAACCAAAACGGAAATGTCCATGGCAAAAAATGATTATGCAACATTTACTAATTGTATACAATCAGCTTTACTTGATCATCGTACAGCCATAGATGCTAATTTAGATGCAGGAGTATCATTAGGTGCTTTATGTGATTTGAAATTTGGTGGTGTAACACCAAATGCCATGAGTGCTACTTTAGTGAGTGAAAATAATACAAATTTTAAAAATTTACCGGGTACAATGAACGTTATAGAGACTAATATGGGTGGTGGGGGTGGTGCTAGTAGTCTAGCAAAAGCTGGAACAGCATCGACATTTGTTAATAATTTATTTGCCAGAGAAGCTACACAAATAAATAATTCTAATAATAACAATAATAACAATACAAATCATACGAATGCTCATTATATGAGTTTGAAGGAAGGAAATGAAGTACAAAGCACTGCCGAGGCCACACAGCAACAACAACATCATAATCAACATCATCACTATTTAACTAATAACTCAAACATTACAATAACTCCAACTGGTAACAATAGACAAATGTCACCACCAGGTGTACATACAACACCTGATAGCCATAATTTGTTGGATTACAATATAGCCAGTACATCAACTAATAATTCTACAGCTTTCCCCCTTATTCCATCTCATGTTTTACATGGTTTTAATATTGATCATGATTTAGTGAGGCATCATCATAATCAGCATCAACATCAACGTGTTCCAACAGCTTTGAATGAAAATCATATTAGTACCACCAGCGTTACAACAACAAATGATACAACACTTAATACTGCCAGCAATACCAACAATAATCATAGCAACATTATACATACAACACAACAACAACAACAACAATCTGCCACTACACATACCACATCATCTGCTACAACATCAATAGCTGCAGTTGCCTCTACAACAACAACCACCAATAGATCTTCAACTTTACATAGTATTGAAGAATTAGCAGCCAGTTCCTGTACACCCACCTCATCAATAACAACTCCTTTAAATACTCTAGTTAATAATACAAATAATATTGTTACTGCTGCCAGTACAACATCATCGTCATCATCCTCTTCAACACCAACATCGTGTGTGGTGTCGGCAGCAACAGTAGCAGTAGTAACAACAGCTACAACTGTACCTTCTTCTGTGACACTAAACCAAAATGATAATCATAAACAGCAACAACTTGTTGTTACACATTTACCAGAACCAGCAACATCAACTGCTAATAACAATAACAATACATCATTACATCAACAACATTTACAGCAACATCAAATGCAACAACATTTGCTTAATTCCTCTACATTGAGTAGTGATAGCAATGATTCTATTTCTTCTTCAGATGAATTTATTGATATGGAATTAAATGATAGATCAGGTTATCAAGACACCACCTCCTCACATTCACAACAGAGCGCCAATGGTGGCGGTGGTGGTCCACCTTCTTCTAATCAAAACTCCACAAATCCCTCAGGTCCCGGTGTTTCTCTTATAAATGGTGTGGTCACTTTAAATTCTGGCCAAGCCACAGGACTCACCGGCGGCGGTGGTGGTGGTGGCGGCAGCAATAATGGTGGCTCATCGGCCTCTTCCGCCTCTGGTACCTATATGTCCCTTTTGCCACCAAATGTTGGCGCCACCAGTTCATCGTCTGGTCATTTGGCCGGGGTTAATGCTTTAGGCGGTGGTACTAGTGCCTCTGCTAGTGGTTCAACGCCTGATGTTATTGATTTCAAACATCTATTCGAAGAGTTGTGTCCGGTTTGTGGTGATAAGGTCAGTGGTTATCATTATGGTCTACTGACCTGTGAATCGTGTAAAGGTTTCTTTAAACGTACAGTACAAAATAAAAAAGTGTACACCTGTGTTGCCGAACGTTCGTGTCACATCGATAAAACGCAACGTAAACGTTGTCCATATTGTCGTTTTCAAAAGTGTCTGGAAGTGGGCATGAAACTGGAAGCTGTGAGAGCCGATCGCATGCGTGGCGGTAGAAATAAATTCGGTCCCATGTATAAAAGAGATCGAGCGCGAAAATTGCAAGTAATGCGACAAAGACAAATAGCATTACAGGCATTGCGTACCTCAATGGGAACGGGTGAAATAAAACCGACACCATTATCACCCGGTTATCAACAGGCCTATACAAATATGAATATAAAACAAGAAATACAAATACCTCAGGTATCCTCACTCACACAATCACCCGACTCATCACCCAGCCCCATTGCTATTGCCTTAGGTCAGGTTAATGCCTCAACGGGTGTGATAGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCATGAAACTGGCACAGGATCCTTACAAAGTGCCAGCGATTCAAAATTGTGCTTCGATTCGGGCACACATCCTTCTAGTACCGCCGATTCCATAATAGAACCTCTAAGGGTCTCACCGATGATCAGGGAATTTGTACAGTCCATCGATGACAGGGAATGGCAAACGCAATTATTTGCTTTGCTGCAAAAACAAACGTACAATCAAGTTGAAGTGGATCTCTTTGAATTAATGTGTAAAGTTTTAGATCAAAATCTATTCTCCCAAGTTGATTGGGCTCGTAACACTGTGTTCTTTAAAGATTTAAAGGTTGACGATCAAATGAAACTTCTACAACATTCATGGTCTGATATGTTAGTATTAGATCATTTACATCAGCGCATACATAATGGCCTGCCCGACGAAACTCAACTCAATAATGGTCAAGTTTTTAATCTATTAAGTCTTGGCCTATTGGGTGTACCACAATTGTCTGATTATTTCAATGAATTACAAAATAAATTGCAAGAATTGAAATTTGATATGGGCGATTATGTGTGTATGAAATTTTTAATATTATTAAATCCAGATGTACGAGGTATTATCAATAAGAAAACTGTATTGCAGGGTCACGAAAATGTACAAGCTGCTTTATTAGATTATACATTAACGTGTTATCCATCTGTGACGGATAAATTCAGGAGGCTGTTAAGTATATTGCCCGACATACATGCAATGGCAGCACGTGGTGAAGAGCACTTATATTCAAAACATTGTGCCGGTAGTGCACCCACACAAACGTTACTCATGGAAATGTTGCATGCAAAACGAAAGGTGTAA
Protein Sequence
MEDFSTPLLADSATNYNHHRTSNNNNNNNNSITNNNNMHHHKDHMLAAGSTPSTTSFIYETPPNSTTKTEMSMAKNDYATFTNCIQSALLDHRTAIDANLDAGVSLGALCDLKFGGVTPNAMSATLVSENNTNFKNLPGTMNVIETNMGGGGGASSLAKAGTASTFVNNLFAREATQINNSNNNNNNNTNHTNAHYMSLKEGNEVQSTAEATQQQQHHNQHHHYLTNNSNITITPTGNNRQMSPPGVHTTPDSHNLLDYNIASTSTNNSTAFPLIPSHVLHGFNIDHDLVRHHHNQHQHQRVPTALNENHISTTSVTTTNDTTLNTASNTNNNHSNIIHTTQQQQQQSATTHTTSSATTSIAAVASTTTTTNRSSTLHSIEELAASSCTPTSSITTPLNTLVNNTNNIVTAASTTSSSSSSSTPTSCVVSAATVAVVTTATTVPSSVTLNQNDNHKQQQLVVTHLPEPATSTANNNNNTSLHQQHLQQHQMQQHLLNSSTLSSDSNDSISSSDEFIDMELNDRSGYQDTTSSHSQQSANGGGGGPPSSNQNSTNPSGPGVSLINGVVTLNSGQATGLTGGGGGGGGSNNGGSSASSASGTYMSLLPPNVGATSSSSGHLAGVNALGGGTSASASGSTPDVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQIALQALRTSMGTGEIKPTPLSPGYQQAYTNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASTGVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCHETGTGSLQSASDSKLCFDSGTHPSSTADSIIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLSDYFNELQNKLQELKFDMGDYVCMKFLILLNPDVRGIINKKTVLQGHENVQAALLDYTLTCYPSVTDKFRRLLSILPDIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00331575;
90% Identity
iTF_00331575;
80% Identity
iTF_00331575;