Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: Hr39
Assembly: GCA_014858695.1
Location: JACGTJ010003832.1:29-3831[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2 1.8e+04 -7.3 10.1 76 144 275 362 220 432 0.53

2 3 8.2e-15 7.3e-11 42.1 15.4 1 150 500 688 500 701 0.70

3 3 5.9e-80 5.2e-76 256.7 0.7 185 408 688 899 682 899 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2	1.8e+04	-7.3	10.1	76	144	275	362	220	432	0.53
2	3	8.2e-15	7.3e-11	42.1	15.4	1	150	500	688	500	701	0.70
3	3	5.9e-80	5.2e-76	256.7	0.7	185	408	688	899	682	899	0.95

Sequence Information

Coding Sequence: ATGTCTACCATTAAAACAGAAAACATAAGTGGAATAGGACCAGTGGTCACTACTACTACAACGGGAGGCACTACGTTTCAATTACCCATTAATATGAGTAATACGGCGGGAGTTATAAGTGGCTCGGGAAATGGTGGTATAACCACTACAACAACTACTACTCGAAATAATGTTTCGGTAACAAATATTAAATGTGAAGTAGATGATAGTGCAAATGCTACATCTTCGTCAAATGGCAATATAGTATCGGTGGGTTTTTATAATGGTTCAAGGGCAATATCTGGGGGTAGTGTAATAACAGCGGGTCATGGTATACGTATACCAGTAACTAAGGCAGAGGATTCAGATTCCGAAACGGAACTTACAAATATAGAAAATTTAAAGGTAACCCGAAGGGTGGCAAGTTCTTCTACAACGGGTGGTGTGCATCATAATGGTCCGAGACCTATGTCTTGGGAAGGAGAGCTTTCGGAAAATGATGATACACGGGAAGCGGAGTTAATGGATACTGATACGACCATGAGTAATGGCGGCATTCAAGAACCTGCTAATGCAGTGGCTGTTATAAAAAGTGAAGCTACTACTACAACACCATCCTCAACGGTGGGTGGAGGGGGAGGTAACTTAATTAAAACAGATTCCGAACAATTGATTTTGGATATGCATCAAGCGGCAACTGCTGCGGGTGGTATTTATCATCCCAAACTTAAATTGGCACCTACACAAAGTGATCCCATCAATTTGAAATATGAACCTCCCGATCATGCCGGTCTAGTAAATTCTCCTTTATTGGCCCGCCAAAAGTCTACTACAGCTTTGCCTCATTTACCTGCCAATCCAAGTCCTGACTCTGCCATACATTCCGTTTATACACACAGTTCTCCTTCACAATCGCCCCTCACGTCTAGACATGCCCCCTACACTCCTTCGCTATCGCGTAATAATAGTGATGCTTCTCATAGCTCTTGTTATTCTTATTCTTCGGAATTTAGTCCTACCCACTCACCTATACAAGGTAGACATCCAGCTCCTCATGGTGTATATGGTAGTTTTAATGGAGCCACGGCCAATAGCTTACAACATTCCGCTTTACTTTATAGACCTATGATGGGTAACGCACAAACAAATCAATCTGGAAAAATGGATGGTAATACGGGAGAAGTGCAAAATTTATCTATGGATGCTGCTGCCACCTCTTCTTCTTCGTCCTTTAATATAACTAGCGATTCTTCAGGCTTGCCTGCTTCTCCAGCAGCTGGCATTTCCCGACAGCAGCTTATTAACTCACCATGTCCTATATGCGGTGACAAGATTTCGGGTTTTCATTATGGCATCTTTTCTTGTGAATCCTGCAAGGGTTTCTTCAAGCGTACCGTCCAAAATCGGAAAAATTATGTTTGTGTAAGAGGAGGACCGTGTGCCGTCAGCATTACTACACGTAAAAAATGTCCAGCGTGTAGATTTGAAAAATGTCTACAGAAAGGCATGAAATTGGAAGCTATACGTGAAGATCGTACAAGAGGTGGCCGTTCTACTTATCAATGCTCTTATACGCTGCCCAATTCCATAATGAGTCCCTTACTCTCACCCGAACAACAACAACAGCAGAATTCTACACAAAATCTTATGCCCGGACAACAACATTCACAACTACAACATCAACTCCAACAGCGTCTCAATCCTCCCCTACAATCGTCACATCAAACAAATGGTTATGGAGCATCAAATTCCCATAACACAACAATTAAAACTGAACAATCCGATGCGTATTTGAAGAATATGCCGACGGCTCATTCTCCCTCTTTAAATGGTATGAACACTTCACGTTCTCTTAATCATAGTGCATCCAATGCTTCATCCTGCTCCTCCAATACATCTGCTTCCTCTACATCACTGCATCACAACAGTATTCCCCAGCTTTTACAAGAAATCATGGATGTTGAACATCTTTGGCAATACACCGATGCCGAATTGGCCAGACTTAATCAGCCATTGACCTCATCATCAAGTTCGACTTCATTAAATTCATCAAATTCAACGGATTCTTCTGCAGCTGCCAATCAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTATCGTCTAGCACCAATCCGGATTTGATAGCTCATCTGTGTAAGGTAGCCGATCATCGTTTGTATAAAATTGTAAAATGGTGTAAAAGTTTGCCATTGTTTAAGAACATATCGATTGACGATCAAATTTGCCTACTCATCAACTCCTGGTGTGAACTTTTACTTTTCTCCTGCTGTTATCGTTCTATAGATTCACCGGGAGAAATTAAAATGTCTTTAGGCAAAACTATAACACTGCCTCAAGCTAAATTAACTGGTTTTCAGCCCTGCATTGAAAGAATGCTGAATCTGACAGATCATTTAAGACGTTTACGTGTTGATCGTTATGAATATGTTGCTATGAAAGTCATTGTTTTGCTGCAATCAGATACTTCCGAATTGCAAGAACCCGTTAAGGTTCGAGAATGTCAAGAGAAGGCTTTGCAAAGTTTACAGGCCTATACATTGGCCCATTATCCTGATTGTCCATCGAAATTTGGTGAATTATTGCTGCGCATACCCGATCTACAAAGAACTTGTCAGCTGGGCAAGGAAATGTTGTCGATTAAATCACGTGATGGCAATGATTTTAACTTATTAATGGAGCTCTTAAGAGGAGAACATTGA
Protein Sequence: MSTIKTENISGIGPVVTTTTTGGTTFQLPINMSNTAGVISGSGNGGITTTTTTTRNNVSVTNIKCEVDDSANATSSSNGNIVSVGFYNGSRAISGGSVITAGHGIRIPVTKAEDSDSETELTNIENLKVTRRVASSSTTGGVHHNGPRPMSWEGELSENDDTREAELMDTDTTMSNGGIQEPANAVAVIKSEATTTTPSSTVGGGGGNLIKTDSEQLILDMHQAATAAGGIYHPKLKLAPTQSDPINLKYEPPDHAGLVNSPLLARQKSTTALPHLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHPAPHGVYGSFNGATANSLQHSALLYRPMMGNAQTNQSGKMDGNTGEVQNLSMDAAATSSSSSFNITSDSSGLPASPAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCAVSITTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSIMSPLLSPEQQQQQNSTQNLMPGQQHSQLQHQLQQRLNPPLQSSHQTNGYGASNSHNTTIKTEQSDAYLKNMPTAHSPSLNGMNTSRSLNHSASNASSCSSNTSASSTSLHHNSIPQLLQEIMDVEHLWQYTDAELARLNQPLTSSSSSTSLNSSNSTDSSAAANQMTNPLLASAGLSSSTNPDLIAHLCKVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIDSPGEIKMSLGKTITLPQAKLTGFQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQAYTLAHYPDCPSKFGELLLRIPDLQRTCQLGKEMLSIKSRDGNDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259264;
90% Identity: iTF_00331572;
80% Identity: iTF_00331572;