Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: retn
Assembly: GCA_014858695.1
Location: JACGTJ010000111.1:5729-45531[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-26 8.5e-23 80.5 0.0 2 89 262 347 261 347 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-26	8.5e-23	80.5	0.0	2	89	262	347	261	347	0.96

Sequence Information

Coding Sequence: ATGCAACTAAATACAATGGACTGTACCGGACGTTCAAATATAAATGAACGTGAATCGGAGTTAGGAGATGATATGTCACACGATGATCATTCCGAAGATGAAATGCGTGACTGCGATTCAGTTGAAGGAGATCATATGTCAAGAGTTGGAACACGCCTAAACACATCAATGACAAGTAACGGAGCAGGAACGGCGGGAGATATGAATGGACCCGATCATCCTAATGATATCGGAATGAGCCACCATCATCAGTTTCCAACAAATCATCCTTTAAATGCCTTAGGTAGTTTTATGGGTATTGGTGGATTGCATGGCATTCCAAATTTACAACACAATGATGTGTTGGAAAAACTTAAAATGCAAGTACGTGATATGAAAGTTGGTTTAATGGATCAAGATTATGCAGCTGCTCATGCGGCTGCATTTGGTTCAAATGTGTTGCCAACACCAATAAATACAGCGTTCACATTACCACCCACAACAATGGCATCTTTCACTCATGCCGCACAGACTCTAGCTGCTCAAGCTGGCAATAATATAAATTCACATTTGAATTCAAACTCTTCTGCGTCTTCTGTAGGAGGACCATCAATGCCTAATGGCAGTCATAATAGCTTTTCCTTTACTTCCCCGACAGCACCCAGCACAAAAGATGTAAATCCTGCCTCGAATTCTTCAACATCAAGTGAAACATCAAATTCTTCACAACAGAACAATGGCTGGAGTTTTGAAGAGCAATACAAACAAGTGCGACAGTTATACGAGATCAATGATGATCCCAAACGGAAAGAGTTTCTGGATGATTTATTTTCATTTATGCAAAAAAGAGGCACACCCATCAATCGTTTACCAATAATGGCAAAATCAGTATTAGATCTTTATGAACTGTATAATTTAGTGATTGCTCGAGGAGGTCTCGTCGATGTTATTAACAAAAAGTTGTGGCAAGAAATCATAAAGGGACTTCATCTACCATCGAGTATAACAAGTGCAGCATTCACACTACGAACACAATATATGAAATATTTGTATCCATATGAATGTGAGAAAAAGAATCTAAGTACCCCAGCGGAATTACAGGCTGCAATAGATGGTAACCGTCGTGAAGGTCGTCGCTCTAGTTATGGTCAATATGAGGCAATGCACAATCAAATGCAAATGCCACCAATGGCCCGTCAATCCTTACCAGGTGGCATGCAACAAATGTCTCCATTAGCTTTGGTTACACATGCCGCTAATAATCAGCAAGCACAGGCTGCTGCAGCAGCTGCGGCTGCACATCATAGACTGATGACCCCATCTTTTGGTCAAGTACCGAATTTAGTAACCCAGGAAATTGAACAGCGTATGATAGAGTATTTAAAATTAATACAAGTGAAAAAGGAACAAAATGCAATAAGTAATGGCTCTGGTCCAATGGGCCTATCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGCACCCGTGAGGCTTTAAATGCATTAGAAATGTCACGTGTGGCATTATGGCAAATGTACCATAATAATACTAGCCCACCGGCTTCTGTCAATACTTCACCACAAGGCGGTGGAAATGTAAACAGTGGTGGAAACCAAAATGACAGCGAGGCACAACGTAGTGAGGCTCTAAACCTTTCGGACTCACCACCCAATCTTACTACAATCAAACGTGAGCGAGAGCGCGAACCCAGTCCTGAAATAAGTGAACACAATGATTTTCATAACCAGCCACCACCTGCTAAACGTGCCGGATTCCCTGCCAGTTTTTATTTGCCTTCCGGTATGGGTAGCATGGCAGCTGCTGCCGCTGCTGCTAATTTTCACTATAAAGGCGGTCATCACGATTCAGATGCAGAGGTAGATGAGGAAAACGAAGAAGACGAAGGCGACCACAATACAACGGCGAACTCCTCCCATGATGATCCTAACGAACGCCAACATTTAAATGGTGGTTCATTGCGACCACCTCGACACCACGGTAGCAATAGCAGTGTTCACAATGATAAGTCTGACGATTCTGCCATTGAAAATTCTCCATCAACATCGGCTGTATCGGCTGGCAATGGTCACATTTCTCCCGTATCCACTAAAAAGATTCACTTATCAAAACAGACACAGCAGCAACAGAATACATCCACAGCAAATGCGGCTGCCATTGTTGCTTGTTCTGAAAACATGACAACGGGTAACACTTCCTCGCTGGGTCCATTCGAGGCATTAAATTTACTTTCCGGAATGCAATTTCGTGTAACCCGAAACGGCACTAATTCTAATGGTGAACAAGAGTTAGCGGTTAACCTTGAATTAAACGGCATTAAATACTCTGGTATACTTATTGCAAACACAACCAATCTTGCAACGGAAACAACGACGTCGACGACAACAATGTCGTTAATAAGTGACAATAGCTACGGTAGCAAAAATATCAACAGTTGTAATAAAGGAGATAACAGAAAGACTGGCAGGCGCAGCCACAGCCCCACCAACATTATTAACAATAGCAGTGAAACGAGCAAGGATTTAGTAGTTGCCATGGATGCAATGGAGGATTCAAATGAATTGACAATGCGTGATACAGAAACACCACCAAATACATCCACCACACCATCATCGTCATCACCATCATCAGTTGTAACAACGACAACAGTAACAGCAGCAACAAATCAAACAAATGCTGTCATAGCAAATGGTCCCAACAACAGTAGTTCGAGTACTCTCAAGGATGCCCTAATAACATCATAG
Protein Sequence: MQLNTMDCTGRSNINERESELGDDMSHDDHSEDEMRDCDSVEGDHMSRVGTRLNTSMTSNGAGTAGDMNGPDHPNDIGMSHHHQFPTNHPLNALGSFMGIGGLHGIPNLQHNDVLEKLKMQVRDMKVGLMDQDYAAAHAAAFGSNVLPTPINTAFTLPPTTMASFTHAAQTLAAQAGNNINSHLNSNSSASSVGGPSMPNGSHNSFSFTSPTAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPPMARQSLPGGMQQMSPLALVTHAANNQQAQAAAAAAAAHHRLMTPSFGQVPNLVTQEIEQRMIEYLKLIQVKKEQNAISNGSGPMGLSPXXXXXXXXXXXXXXXXXXXXXXXXXSTREALNALEMSRVALWQMYHNNTSPPASVNTSPQGGGNVNSGGNQNDSEAQRSEALNLSDSPPNLTTIKREREREPSPEISEHNDFHNQPPPAKRAGFPASFYLPSGMGSMAAAAAAANFHYKGGHHDSDAEVDEENEEDEGDHNTTANSSHDDPNERQHLNGGSLRPPRHHGSNSSVHNDKSDDSAIENSPSTSAVSAGNGHISPVSTKKIHLSKQTQQQQNTSTANAAAIVACSENMTTGNTSSLGPFEALNLLSGMQFRVTRNGTNSNGEQELAVNLELNGIKYSGILIANTTNLATETTTSTTTMSLISDNSYGSKNINSCNKGDNRKTGRRSHSPTNIINNSSETSKDLVVAMDAMEDSNELTMRDTETPPNTSTTPSSSSPSSVVTTTTVTAATNQTNAVIANGPNNSSSSTLKDALITS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045157;
90% Identity: -
80% Identity: -