Cruf013185.1
Basic Information
- Insect
- Chrysomya rufifacies
- Gene Symbol
- Rel
- Assembly
- GCA_014858695.1
- Location
- JACGTJ010009830.1:1-5954[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-51 1.3e-47 161.8 1.4 1 168 154 332 154 333 0.92 2 2 0.25 1.1e+03 -0.6 0.5 66 121 870 927 847 964 0.64
Sequence Information
- Coding Sequence
- ATGGATAATATGATGCCATATGGTATGACAAATGTTAACAAGGATATAACCGATATGGATACACTGGCACCCGTACGTAGAATAAGCGAATCTTCAGTAGGTGGCACCAGTGGCTATAATAGCACAACATCGCCGGGACCAGGTAATTCTCCGCAATCAAGCGGTTATTCCCCCGTACAATCACCAGCCAGTGTCTTAAATACCGAATTCTCTAATTTAGTTTTCTCCACTGAACAAAATACTAATCTAAATTATATACAATTACAAAATGTACCGCAACAACAATTGAATGTTAATAATAATTCATATATAGAACTACAAACACAAAATATTAATTTTTCACCAGCCATGAACTTTGGAAATCCCTTAAATTATCAATTTCAAATGCCACAACAGCAATTGCCAACAGCTTCCAATAATATGCCTTATTCTGAAGTTAAATATGAATATGAAGCCACCCTACGTATAACTGAACAGCCCGTAGAGAAATTTCGTTTTCGTTACAAGTCTGAAATGCATGGCACTCATGGTTCATTGAATGGCCAAACATCACAAAGGAATACGAAAACATTTCCAGAAGTACAGCTTGTTGGTTATAAAGGTCAGGCTATAATCCGCTGCAGCTTGTTTCAAACTAATCTCGAAAGTCCACATTCTCATCAGTTGGTGGTACGCAAAGATGATCATGATATTTGTGATCCACATGAACTGAAAGTATCAGAGGCAGATGGTTATTTTGCTGAATTTAAAAATATGGGCATCATACATACGGCTAAGAAATTTATTGTTGAGGAATTGTTGAAAAAGAAACGTAAACGTTTGGGACGTGAGATTTTGACAACAAAGGAGGAACAAGAATTGTATAAACAAACGGAAAAAGAAGCTAAAGATATGAATTTAAATCAGGTACGCCTTTGCTTTGAAGCTTTCCGTGTTGAGGAAAATAAATCATACACACCTATTGCTGCTCCCGTCTACTCGAATCCCATTAATAATCGCAAATCAGCACAAACGGGAGAATTGCGTATTGCACGCTTAAGCATTGCAACAGGCAATGTTACAGGTGGTGATGATTTAATATTATTAGTGGAAAAAGTTAGCAAGAAAAATATTAAAGTACGTTTCTATGAAATGGTCGATGATGAACAAGTTTGGGAAGCATTTGCCACTTTTCGAGAATCCGATGTACATCATCAATATGCCATTGTATGTCGTACACCGGCCTATAAAGATAAGGATATCGATAAACCCGTCGACGTATTTATAGAATTGGTACGACCGTCAGATGATGAACGCAGTTATCCGCCTGTAACTTTCCGCTATAAGCCCAGTTATGCTGTAATATCACGTAAACGTAGACGTACATGTTCTTCTTTTAATAGCAGTTCAGCTAGCAATTCGGGTTCATTAAGTTCCGGAGATATACCAAAAACCGTACAGGAGCAACAAGATCAACAAAGATCAATTGGCGTTATTACATCAGAAGAATTGAATAAGTTAATAAATATTTCAGGGAATGGTAAATCGGAGAATTTGAGTAATGTTGATTTGTCGCTATTTACATCAGATGACAAAAATGATGATTTGGAGAAACTGTTGCATAATGACTTGGACACATTAATGGGATTTACTGGTACTGCTTATACTACAACAGGTCGCACTGAAAGGGATGGCATTTGTACAAGCAATGATGATGCGAAAAAGTACCATCATTATAAGAAAGCAATGATAAGTAAAAAACAAATGGACATAGCTCGACAACAACCAAAATTAAATGATTACATACAACGCATTTTGAGTATATATCAGAGAAATTCTAAAACTCAACCTAATCCCATCGAATTTAAAAGTGCTGCCGAGCAGATTACCAAAATTATTAATGAATATTCTGAGAAAAGTCCAGAACCATTAATACATGAAATCGCTTTGGGCGAAAACAATAAATATGCTATAGCAATATTAAAAATTTTAGAATATTTCAAATTACATGATCTACTTAATTCCGTTGTAACAAAACGTTCTCAAACTGTTTTACATTCTCTATGCCTACATGGCCAACCCAACTATATACGAGCTCTTTTGAAAATGGGTTGTAATCCAGATTTACAAGATTCTGAAGGTAATACTGCTTTGCATATTACAGTATTGGAAAATCAATTGAATTGTTTGGATAGTTTTATAAATTCAAATATACCTTTGAAAATAAATGAATTAAATGATGATGGTTTTACACCCTTACACTTGGCCATACGTGATAATAAATATGAGTTTGTTGAAAAACTATTGAAATATGATAATAAAATTTTGATGACAAAATGCCAAAAAGACGGTAGTAATGCATTACACATGGCTGTCCAACAACAAAATCTTAAATTGGTTAATTTATTATTGAATAGTTGTCCTTCTTGTTTATTATATACAGTATTATATACGAAAAATAGATCGGGTTATACACCGTTAGATTTGGCTAAACAACAAGTAACAAGCGATGAACAAGCCAAACAAATTTTAAGTCATTTGCTAAGTGTCTACAACAAATACCCTTCAGCACAAAAAATGGATATTAATATTGAAGATAACGAGATTGAAGAAGAAGATGAAGACGAAGATGCTAATAAGCTTGTTATAAAAGAAGAAGAAAATTCATGTTCATCAACCGAAGATGATGATGAAGATAGTAATAGCATTATATGTGACACTACAGCAATTAACACAACAACAACAAAAAAGAATTTAAAATCAGAAACTGATGTGAATATGACAAATATACAGAAAATTAAACAGGAATATAATGATGATGATAATGTGGAGACTTCTACTACTGTTGCTGCTGTACAACTTACCATAAATGATTTGGAATTGGCTTTAAATAATCAACAAATTTATACAAAACTTTGCAATACTTTAAATACAAACAATAATTGGAAAGAATTAGGTAACGATTTGAATATGCCATTGACTTGCATAAGAAGCGCAGAAGCTTTTGTAAATTCCTTAAGACGAAAACTACAAACAATTAATTATATAGATTTAACAAAATCCTTGGAAAAAATTGACAAAAGTTTAATAGATTTATTAAAGAATAATAAATAG
- Protein Sequence
- MDNMMPYGMTNVNKDITDMDTLAPVRRISESSVGGTSGYNSTTSPGPGNSPQSSGYSPVQSPASVLNTEFSNLVFSTEQNTNLNYIQLQNVPQQQLNVNNNSYIELQTQNINFSPAMNFGNPLNYQFQMPQQQLPTASNNMPYSEVKYEYEATLRITEQPVEKFRFRYKSEMHGTHGSLNGQTSQRNTKTFPEVQLVGYKGQAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSEADGYFAEFKNMGIIHTAKKFIVEELLKKKRKRLGREILTTKEEQELYKQTEKEAKDMNLNQVRLCFEAFRVEENKSYTPIAAPVYSNPINNRKSAQTGELRIARLSIATGNVTGGDDLILLVEKVSKKNIKVRFYEMVDDEQVWEAFATFRESDVHHQYAIVCRTPAYKDKDIDKPVDVFIELVRPSDDERSYPPVTFRYKPSYAVISRKRRRTCSSFNSSSASNSGSLSSGDIPKTVQEQQDQQRSIGVITSEELNKLINISGNGKSENLSNVDLSLFTSDDKNDDLEKLLHNDLDTLMGFTGTAYTTTGRTERDGICTSNDDAKKYHHYKKAMISKKQMDIARQQPKLNDYIQRILSIYQRNSKTQPNPIEFKSAAEQITKIINEYSEKSPEPLIHEIALGENNKYAIAILKILEYFKLHDLLNSVVTKRSQTVLHSLCLHGQPNYIRALLKMGCNPDLQDSEGNTALHITVLENQLNCLDSFINSNIPLKINELNDDGFTPLHLAIRDNKYEFVEKLLKYDNKILMTKCQKDGSNALHMAVQQQNLKLVNLLLNSCPSCLLYTVLYTKNRSGYTPLDLAKQQVTSDEQAKQILSHLLSVYNKYPSAQKMDINIEDNEIEEEDEDEDANKLVIKEEENSCSSTEDDDEDSNSIICDTTAINTTTTKKNLKSETDVNMTNIQKIKQEYNDDDNVETSTTVAAVQLTINDLELALNNQQIYTKLCNTLNTNNNWKELGNDLNMPLTCIRSAEAFVNSLRRKLQTINYIDLTKSLEKIDKSLIDLLKNNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -