Basic Information

Insect: Chrysomela aeneicollis
Gene Symbol: RREB1
Assembly: GCA_027562985.1
Location: JARUHR010000009.1:11697199-11702587[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00089 0.14 14.2 0.8 1 23 55 77 55 77 0.96

2 16 0.00037 0.057 15.4 0.4 1 23 90 112 90 112 0.98

3 16 5.5e-05 0.0083 18.0 6.2 1 23 118 140 118 140 0.98

4 16 1.5 2.3e+02 4.0 0.1 1 23 201 225 201 225 0.80

5 16 0.057 8.7 8.5 1.3 2 23 231 253 231 253 0.96

6 16 0.14 22 7.2 1.3 1 21 299 319 299 320 0.93

7 16 0.082 12 8.0 0.1 1 23 441 463 441 463 0.96

8 16 5.5e-05 0.0085 18.0 1.9 1 23 472 494 472 494 0.98

9 16 0.0016 0.25 13.4 2.3 1 23 500 523 500 523 0.97

10 16 0.00056 0.085 14.8 3.0 1 23 911 934 911 934 0.97

11 16 0.00056 0.085 14.8 0.4 2 23 1150 1171 1149 1171 0.97

12 16 0.14 22 7.2 6.3 1 23 1177 1200 1177 1200 0.97

13 16 0.1 16 7.7 0.7 1 20 1225 1245 1225 1246 0.94

14 16 0.75 1.1e+02 5.0 2.8 1 23 1302 1325 1302 1325 0.95

15 16 0.002 0.31 13.1 0.2 2 23 1368 1389 1367 1389 0.96

16 16 0.0085 1.3 11.1 5.9 1 23 1395 1417 1395 1417 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00089	0.14	14.2	0.8	1	23	55	77	55	77	0.96
2	16	0.00037	0.057	15.4	0.4	1	23	90	112	90	112	0.98
3	16	5.5e-05	0.0083	18.0	6.2	1	23	118	140	118	140	0.98
4	16	1.5	2.3e+02	4.0	0.1	1	23	201	225	201	225	0.80
5	16	0.057	8.7	8.5	1.3	2	23	231	253	231	253	0.96
6	16	0.14	22	7.2	1.3	1	21	299	319	299	320	0.93
7	16	0.082	12	8.0	0.1	1	23	441	463	441	463	0.96
8	16	5.5e-05	0.0085	18.0	1.9	1	23	472	494	472	494	0.98
9	16	0.0016	0.25	13.4	2.3	1	23	500	523	500	523	0.97
10	16	0.00056	0.085	14.8	3.0	1	23	911	934	911	934	0.97
11	16	0.00056	0.085	14.8	0.4	2	23	1150	1171	1149	1171	0.97
12	16	0.14	22	7.2	6.3	1	23	1177	1200	1177	1200	0.97
13	16	0.1	16	7.7	0.7	1	20	1225	1245	1225	1246	0.94
14	16	0.75	1.1e+02	5.0	2.8	1	23	1302	1325	1302	1325	0.95
15	16	0.002	0.31	13.1	0.2	2	23	1368	1389	1367	1389	0.96
16	16	0.0085	1.3	11.1	5.9	1	23	1395	1417	1395	1417	0.98

Sequence Information

Coding Sequence: ATGGATTCACCTCGCCAAACCAAAGAAGCAGTCGCCAATCGCAGCGACTCCGGCATTTTCTCGACCACCAACACCACCATCGAGCGAGCGGATGTTTCCAAAGCGCCATCAGAGAGCTACGACAGCGACGACCGCAGCGACTGTTCCTCCTCTGAAAGAAAATATCTGTGCCCCATATGCGAGATGATGCTGACCTCTCAGCACGAATTCACCCTGCACATCCGCTCGCACAACAACGAGGGCGAAGTCCAGGACGTGGAGAAGGGCTACACCTGCAGGATATGCTTCAAGGTGTTGAGCTCCAGCAGCAGCCTGGACAGACACGTTCTGGTGCACAGCGGGGAACGGCCGTTCCACTGCAAGTACTGCGGGGATTCCTTCACGACCAATGGCAACATGCACAGGCACATGAGGACGCATTTTCTGAAGGGCGATCACAGCTACGAGTCCGACAGCAGCTCGGACTCTGAGAGCTCGAAGAGCACCGAGTTCAACAACAACAGAGTGGAGAAGGGCGTCAAGAGGAAGAACGAATACCTCGATGATGGGGAGAAGAGGATAAAGGAGGAAGACTCTGATTCGGAGGCAGCGCAGTCGTTCTACAGGTGCCCTGTCTGCGAGAGAACGGACTTCAACTCGGCAACAGTTCTGGAAACGCATCTGGAAGACAACCATCCCGACTACCCTGCCAAATGCAACATGTGCAAGCAGGTTTTTCTGAACAACAAGTTGTTGACTGTCCACAAGGCCACCACCCATGGAAATACCCTGAACAGACAGCCGGTGGTGGGTTTCAAGGACCTCACCTTCGTGGACTTTTCCAGCGAAAAGTTTCCGCTTATCGCCAGGAGAGAGTGTGAAATGAACTTGCACAAAGTGTCTGGGGGACTGAAGTTCCAATGCAAGAGGTGCAACAGGGCTTTTCCTTGCTCCAGTTCTTTGGATATCCACGAGAGGAGTTGCATTCCTACGGAATACATCAACGGTCTCGATCTCACCTCCATTTCTAAACCGGAAATCAGACGGATGGACTTCTTCTCCAGGCTGAATCTAGTGGACAATTCTCAAGAAAAGCCACCTCCGAGCTCTAACAAGCTCATGCAGCACATTGCTAAGAACATGGACGCCACCCATGACCTCGCTGACATCCAGTCAATACTTTCGAACATCAATCTGCAGCAGCTCCAGACTAAGCAATTGGAGACACGACACAACACGCCCAAGCCTCCGGAACAATCTCCAGAGATTCAGAAAAACGAAGAGGAGGAGTCCCAGGATCTGTTCGCGGTTGAGTTCAGGAAAATGAAGATGCGTGGCGAATTTCCTTGTAGACTTTGCACCGCAGTTTTCCCGAATCTGAGAGCGCTCAAAGGTCATAACAGAGCTCACCTGAACGGAAATAATAATGGTACTTATCATTGTAATATGTGCCCCCATTCCTCCATCGATAAAGCTGCGCTGATTCGTCACATGCGGACACATAATGGTGACAGACCTTACGAGTGTGCCCTCTGCAACTATGCATTCACCACCAAGGCCAACTGTGAGCGACATTTGAGAAACAGGCACGCCAAATCTACAAGAGACGACGTTAAGAAATCGATTATCTACCATCCTTCCGAGGATCCTACCAATGAGGATTTGAACAAACTCAATACCAAAGACGATCCAAAGAAACCTAACCTTAATGACACCGAGGAGTATGAAAAGGTGCACTGTTCAACTCCCAAATACCCAGCTGAGGCTTCCTTGAAACCAACCATCCAACAGGTGATTCCAGAACTGCAAACTCTCAGACCTACGAAAATCTTCTCGAATATCAACGATATGATCCGTTGCGATAATCTGAAATCCTTGAAGGAGCACAGACTTGTTCATCACCAAAATGGATCAGCACTTCCACCACCTAAGCTCAATTTCCATCCTACTTCGCCTGGAAAGATCCAAGTGAAAAGCATCGAGGATCTTAAAGAAAGCGATTCCTATAACAACGACTCCGAAGATGAGTATATTGATGAAGAAGACGAGCAACCTTTAGATCTGGTTTTGGACTTGAGCAAGAAAAAGTGCGATGAGCTGAGTCGACACAACACTGAGGAGAACGATGATGAACCCCAAGACCTCACGAAGAAATCCCCATCACTTCCTACCCAAATGTCTCCCCAACTACCTCCAAATGTGGGGCAGATATTTGCCCACCAATTTCTCAAGGGCGCTCCAAAAATCGATCCAGCTGCCTTGTACGCCACTCAGCTCGCTCTCTATCGCAGCGGATTGGGAATCCCCAATTGGCCAGGTTTTCCTTTCAACACCTTGCTCTTCCCAACTCTACCAACAAACTTACCCCCGAACGCCCAGGAAATGAGGGAGCGAATACAGCGCTCCCAGATGTGTGGCGGGTCAGTGATTTCCGAAGAACTCAACAACCACCACAACCTGCAGAGCCCTCTGCGCAGTCCTACCATTGCTTTCAACAATGGTTTCAAGGTAGAGCCCAAATCGGACATAACAATGAAGAATAACTTCTCTACGCCCAACAAAGCTGATCAGTTGAAACCGCTGAGCCTAACGATTGAATCGAGTTTCGCGGAGAACATGTCGAAATTGCATAGTCCGATCCCACACAGCAAACCTGAGATAATGCAGTCTCCAAACTCTGTGAAGATGGTGATCAAAAACGGGATCCTGATGCCCAAACAGAAGCAGAGGCGGTACAGGACAGAGAGACCATTCACTTGCGAGCATTGCTCTGCAAGGTTCACTCTTCGCTCCAACATGGAGAGGCATATCAAACAACAGCACCCGCAGTACTGGTCGCAAAGGCAACGTGGCAACGTGGGCAATCCTGGGAAAAAACCGCAGATGCCTCCGAACCAGGGTTACTGCGATATCAGCATTCCCAACTACGAGTTACCAAAGATGCCAGAATACGGCGAAACCAAAGACATGCTCAACGAGAAGATTAAGTTTGCCATTTTGGCCCAGCAACTCAGAGCTAACCAGGATATGCAAGAGTACGGCAGGAAGGAGGAGGAGGAAGATTGCGATCTGGTTATAGACGAGAACGATGAAAAAGAAGAAGCGAGGCAGGAGGAGCTAGAACGCAACGAACGCAACATATTCGCCAGCCGCATTCTGGAAGATAGGTTGCGTGAGATGCAGCAGTTCAAGAGCGAGAAGACCATCAAAAGCGAAGAGATCTCGGACTTGGTCCCCGTGTCTCGACTGTTGGATAACGCTTCGCAGCAACagttcaatgaatttttcaaggGGAATGGTGAAGATCCTGAAGTAGGAATCGCTAGCGAAGAAGATGAAGAGGGACTGGTTGCTAGTGGTAGTACGAGCGAAGAAAATGTATCAGGCACCGACGAAAACAAGTCAGAGTCCGACACCGTACAGCCGGTCAAAAAGAAATCCGCCTACTCTCTGGCGCCGAACCGCGTCAGCTGCCCCTACTGCAGTCGCAAGTTCCCCTGGACCTCCTCTCTGCGCAGGCACATCCTAACCCACACCGGCCAGAAGCCGTTCAAGTGCAGCCACTGCCCCCTCCTCTTCACCACCAAGTCCAACTGCGACCGCCACCTGTTGCGCAAGCACGGCAACACCGCCTCCGCCGTTGCCAACGACTCGGGCACCGCCTACCTGATGAGGAACGTGCCCGAGCGGCCGTTCAAGTGCTCGAGCTGCCCCAGCAGCACCTTCGCCACCTACTCCAACCTGAAGAAGCACATCAGCTGCAAGCACACGACCGATGACATCAAGGCGCAGGGCTACGAGGCGGGCAGCTCGGAGGACGAGAAGCTGCCCACTGGCAGCGCGGAGGCCAAAACCGACTGGGAGGGGCAGCTGGCTTGCAGCAAGACCCCGGTGGAGGCGGCAGCTCCGACCTCTGACCTGCCCTTCAAGTGCCACCTCTGCGAGGGTTCCTTCTGCGAGCGGCAGGAGGCGCTGGACCACATCCGCGACAAGCACGCCTCGGAGTACGACCTGCTGATGTCGAAGAACGCCCTGGAGGGGCACGCTGCCACCCAAGAGGACTCTGGGCCGCCCGAGGACGAGGACAGGGGCAGGTTCCCGGACTACTCCAACCGCAAGGTGGTGTGCGCGTTCTGCGTGCGCAGGTTTTGGTCGGCGGAGGATCTGCGCAGGCATATGCGCACGCACACCGGGGAGCGGCCGTTCAGTTGCGACATCTGTCGGCGCAGGTTCACGCTGAAGCACAGCATGCTGCGCCACAGGAAGAAGCACAACGTGGGGTTCGAGCACGACGCTCATAATAGCGACGAGGACGTCGCTTCACCGACGTTGCCCCAGGGGGTGGGGGTGAAGACTGATGAGTCGGATGGGGCGGAGGGGGGTGGGGATCTGATCAGCAATTTGCTGGGGCTCAGGGACAGGTCCATAATTGATAAGGTTCTGGCTGCCTCGCCGGATGATGCCGCCAAGTTGTTGGGAGTCAGGAACGGCGTCAAAGAGTAA
Protein Sequence: MDSPRQTKEAVANRSDSGIFSTTNTTIERADVSKAPSESYDSDDRSDCSSSERKYLCPICEMMLTSQHEFTLHIRSHNNEGEVQDVEKGYTCRICFKVLSSSSSLDRHVLVHSGERPFHCKYCGDSFTTNGNMHRHMRTHFLKGDHSYESDSSSDSESSKSTEFNNNRVEKGVKRKNEYLDDGEKRIKEEDSDSEAAQSFYRCPVCERTDFNSATVLETHLEDNHPDYPAKCNMCKQVFLNNKLLTVHKATTHGNTLNRQPVVGFKDLTFVDFSSEKFPLIARRECEMNLHKVSGGLKFQCKRCNRAFPCSSSLDIHERSCIPTEYINGLDLTSISKPEIRRMDFFSRLNLVDNSQEKPPPSSNKLMQHIAKNMDATHDLADIQSILSNINLQQLQTKQLETRHNTPKPPEQSPEIQKNEEEESQDLFAVEFRKMKMRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYHCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKSTRDDVKKSIIYHPSEDPTNEDLNKLNTKDDPKKPNLNDTEEYEKVHCSTPKYPAEASLKPTIQQVIPELQTLRPTKIFSNINDMIRCDNLKSLKEHRLVHHQNGSALPPPKLNFHPTSPGKIQVKSIEDLKESDSYNNDSEDEYIDEEDEQPLDLVLDLSKKKCDELSRHNTEENDDEPQDLTKKSPSLPTQMSPQLPPNVGQIFAHQFLKGAPKIDPAALYATQLALYRSGLGIPNWPGFPFNTLLFPTLPTNLPPNAQEMRERIQRSQMCGGSVISEELNNHHNLQSPLRSPTIAFNNGFKVEPKSDITMKNNFSTPNKADQLKPLSLTIESSFAENMSKLHSPIPHSKPEIMQSPNSVKMVIKNGILMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQYWSQRQRGNVGNPGKKPQMPPNQGYCDISIPNYELPKMPEYGETKDMLNEKIKFAILAQQLRANQDMQEYGRKEEEEDCDLVIDENDEKEEARQEELERNERNIFASRILEDRLREMQQFKSEKTIKSEEISDLVPVSRLLDNASQQQFNEFFKGNGEDPEVGIASEEDEEGLVASGSTSEENVSGTDENKSESDTVQPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNTASAVANDSGTAYLMRNVPERPFKCSSCPSSTFATYSNLKKHISCKHTTDDIKAQGYEAGSSEDEKLPTGSAEAKTDWEGQLACSKTPVEAAAPTSDLPFKCHLCEGSFCERQEALDHIRDKHASEYDLLMSKNALEGHAATQEDSGPPEDEDRGRFPDYSNRKVVCAFCVRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVGFEHDAHNSDEDVASPTLPQGVGVKTDESDGAEGGGDLISNLLGLRDRSIIDKVLAASPDDAAKLLGVRNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00740286;
90% Identity: -
80% Identity: -