Caen003040.1
Basic Information
- Insect
- Chrysomela aeneicollis
- Gene Symbol
- dmd-4
- Assembly
- GCA_027562985.1
- Location
- JARUHR010000002.1:17668298-17671161[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-24 3.6e-20 73.0 12.3 1 47 11 57 11 57 0.98 2 2 0.093 1.6e+03 0.5 1.6 29 35 242 248 240 249 0.87
Sequence Information
- Coding Sequence
- ATGGCAGCACATGGTGCCAACAAACCAGCGAGGATTCCAAAATGCGCTCGTTGCAGAAATCACGGAATGATATCTACTCTGAGAGGTCACAAGAAGCAGTGTATCTATAAACACTGCTCTTGTCAAAAATGTGGTCTCATCAAGGAACGACAAAGAATTATGGCAGCTCAGGTAGCTCTTAAACGACAGCAAGCAGCAGAAGATGCGATAGCTTTACATTTGGCGTCGAAGGAAAGTGGAACTACCTACGACTACTTGCCTCCAGGCCGCATATACGGAATGCAAATCACATCCCCCGAGTCAGATCCAACCACCAGTAACTCAGGAGGACCTCCAAGTGTGGAATCTAACGAAGAAGTCGTGGTTAGCCCTGCTTCGATAGATATGCTCTCGCAGCTGTTCCCCAACAAGAAACGATCTGTTCTAGAACTTGTATTGAAAAGGTGTAACCACAATCTCCTTCAGGCAATCGAACACTTCAACGAGACCACAAAACCAGCTGCTGAACCATCCACGAATACCCCTTCGGAAGATTCGACATCGGCCTTCAGACCAGTCACAAACACGACGAAGCTGTCGAAATCCTACATGGTTCCCCACCAAAGTAGCATCTCTTTCATTCCCAGCAATAAGGCTTTCAGCTTCTACCCATTCTGGCCGCTGTTCAACTCTCAGTTCAACCCGCAGCCGATTCTGCCCAGTCCTGTTTTGGTGCAGGGCATTTGTGAATGCGATCAGTGTAGGCCAGAGGCTGGAACTTGGGTGCCAGGACTAGGCAAACCAGAGGTTACGAGTAGAATCAATATGAGACCAGGATAG
- Protein Sequence
- MAAHGANKPARIPKCARCRNHGMISTLRGHKKQCIYKHCSCQKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASKESGTTYDYLPPGRIYGMQITSPESDPTTSNSGGPPSVESNEEVVVSPASIDMLSQLFPNKKRSVLELVLKRCNHNLLQAIEHFNETTKPAAEPSTNTPSEDSTSAFRPVTNTTKLSKSYMVPHQSSISFIPSNKAFSFYPFWPLFNSQFNPQPILPSPVLVQGICECDQCRPEAGTWVPGLGKPEVTSRINMRPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00739996;
- 90% Identity
- -
- 80% Identity
- -