Basic Information

Insect: Chrysolina haemoptera
Gene Symbol: Zfpm1
Assembly: GCA_958298965.1
Location: OY282592.1:31142822-31145962[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.3 9.7e+02 2.3 0.6 3 23 8 28 6 28 0.93

2 15 0.037 5.7 9.3 0.3 1 23 566 589 566 589 0.92

3 15 0.0012 0.18 14.0 0.2 3 23 667 688 665 688 0.93

4 15 0.0084 1.3 11.3 1.4 1 23 696 718 696 718 0.98

5 15 0.00025 0.038 16.1 2.3 2 23 721 742 720 742 0.97

6 15 0.00026 0.041 16.1 1.4 1 23 748 770 748 770 0.97

7 15 7.9e-05 0.012 17.7 5.8 2 23 777 798 776 799 0.95

8 15 0.48 74 5.8 1.1 5 23 812 830 811 830 0.95

9 15 0.0076 1.2 11.5 2.6 3 23 837 858 836 858 0.97

10 15 0.29 45 6.5 0.1 2 23 874 894 873 894 0.96

11 15 9.7e-05 0.015 17.4 1.1 1 20 900 919 900 922 0.92

12 15 0.056 8.5 8.8 0.1 1 23 930 952 930 952 0.98

13 15 0.0015 0.23 13.7 2.9 1 23 958 980 958 980 0.97

14 15 6.5e-06 0.00099 21.1 2.5 1 23 986 1008 986 1008 0.98

15 15 0.0043 0.67 12.2 4.7 1 23 1014 1036 1014 1036 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.3	9.7e+02	2.3	0.6	3	23	8	28	6	28	0.93
2	15	0.037	5.7	9.3	0.3	1	23	566	589	566	589	0.92
3	15	0.0012	0.18	14.0	0.2	3	23	667	688	665	688	0.93
4	15	0.0084	1.3	11.3	1.4	1	23	696	718	696	718	0.98
5	15	0.00025	0.038	16.1	2.3	2	23	721	742	720	742	0.97
6	15	0.00026	0.041	16.1	1.4	1	23	748	770	748	770	0.97
7	15	7.9e-05	0.012	17.7	5.8	2	23	777	798	776	799	0.95
8	15	0.48	74	5.8	1.1	5	23	812	830	811	830	0.95
9	15	0.0076	1.2	11.5	2.6	3	23	837	858	836	858	0.97
10	15	0.29	45	6.5	0.1	2	23	874	894	873	894	0.96
11	15	9.7e-05	0.015	17.4	1.1	1	20	900	919	900	922	0.92
12	15	0.056	8.5	8.8	0.1	1	23	930	952	930	952	0.98
13	15	0.0015	0.23	13.7	2.9	1	23	958	980	958	980	0.97
14	15	6.5e-06	0.00099	21.1	2.5	1	23	986	1008	986	1008	0.98
15	15	0.0043	0.67	12.2	4.7	1	23	1014	1036	1014	1036	0.97

Sequence Information

Coding Sequence: ATGGATTCAATCAACATTTGTTGTCctgtttgtacattatttttgAGACCAGGCATAACCTTGAAGCAGCATTTAACATCTCATCCCAAACAAAAGGTTATTGATGCTTTGGTTAAATTATCCGTAGTTGAAGAGTCACCTAATCAAAAACAGAGTGTATCGCAACAGCAGTTGCAACCTACGAATGTAGCAACGGCAGGAAGTAGTCATATAAATACAGCTGTTGTCAACCACTCTTGGAACCAGACTCCTCCCGTCCAACTAGGAACTCCGCCTCAAGTAAATCCTTCACATGGCAACCATGTTTTCATTTATCAACAAAGTATGAGTACAACCTCACCTCAACCTCCTGTTTTACATGTCAACCCACTTTCTCAACAGTATGTCTATCCAACTGCTTTCAATCCGTTAATGATGATGCCTTATGTTTATCAACAACAGCAGCAAGTGATTCTTTCAAGTAACTCTTCTTTACCACCTCAAATTAAAGCATTATCATTTGATTCACCTAACGCCTTGGAATCACAAGGTCATGAGGTTACTGTTACTGAAGATGCAAGTGACGCCCAGAAGGAGTGTAGTATTGTTGAGGTTCATAAGAACGTTAAAGAAGCTCCAGAGGAAAACCTTGATGATACAAAAATAGAAGAAGAATTGTCATCTAgtcaaactatcacacttgtgaaAAATCATAAAGTATCCATAAATGATGGTAACGTAGAAACCATGGAAGATTTCGAGAATGAAAGAATGGTGCTGAATGACATACCTCCTGATGAATATCATTCTGGAGATGAAGGACAATGTAATCAAAGTCCTGATCACGTTGGTCACAATTCAAGCCAAATTGACGAAGAAGTTATAGGATCATCATTATCTGAAATGAATTCAGATTGGAAATTAGAATCCGAGTTGAGCAAAGCATGCCAGACTCAGATAGCAAGCCATTTGTCTCCATCATTACAAGTTGTGGAAGAGGAACTAGTTTTGGAAAATGACAATACTTTCATTCAGGAAGATCAACCGGAATATTTCTACATGAACTCTCAGAACAATGAATATGTTGAACAGGAACCTAATGCTTATACTGGTCAACAAAGTACTGAGTCAGCACCTTTCTCATCAGTGGAGAGTACTGAAAATTACGAACAGGCTGAACCAATTTATACTTCAGCAAATATTTTGCATGGTGATCATCTAGATTTTGTTAATTTagatgatattattattattaacgagTTTAATCCTAATCAAGTAGTTGCTCAagtggaaaatttcgaaaactcatctccTGAAAGACCTAGAGTGCTGATGACCATAGGAGAAATTCCAGACCATTCAAGGATAGATTATATGGAACAAAGGGACTTTGAAGAGAGCATGTCTCGAGGTAGTTCACAAGTCAACATCAGATCTGATGAAAGAATGCCTGCTAGAGGTGAACTATCAGGACAGGAAAGCATTGGAGGTAACAGTGATATAACCTGGAACAGAATGCAGTATCAAGAAGGAAGTTCTCAAATGTCTCAGTCTTATGATTTAATAGGAAGAGGGGGTTGGGAGGCGTCAGATAGTGAAAGTGTGGATGCACCTGCTGCACAGCAAAACTCTACTCAGGCTTCCTATAAAGAAGATGAGTATGAAGTTGAGAACAATACCCCCATTATTGTCAGTTGTTCAGGTCCATCTCTGAACTTCAAATGCCCAAGTTGTCCGATAAATTTTGCAACGTCCAAGGAAAGGAAGGAACATGAGTTACAGGAACATtctaaaaaatcaaaactgaatCTTATAGGAAGTGAAATTGGCAAGAGGAAAATTAAAAAGCTTGTTTTGAAGATGAAACCGGAGAATACTGAAGTTGAGCacaattttgataatgttttcacaaataaattgaAGCAAGAAAATATTGCAGAAACGCAGTCAGAACAGGTTCAGTTGGAAACAACTTTTAAAATAGATGAACCTTTAGAATCACTTGACCTCAAAACTATTTGTCCAATTTGTGACTATGTGTGCCCGAATAGCAAAGCCCTAAAAGTGCATAAAATGGAagtccacaaaaaaaattcagctgCCAAGCACAAGTGTTTAACTTGTGGCGAATTATTTCCTAACGAGTATAAGTATACAGAACACCTTAAGATACATCCTCTGGAGTGCAAACTATGCGGCAAGTTATTCTTTAGACGTCAAAATATGCGACTGCACATGAAAAGACATTTGGGACTCAAACCATTCAAATGTGAAATATGCGAGAAGTCCTTCATCACAAGGCAGAAATATAATGAACACAGTAATATTCACACAGGCAATGCTCCTATCAAATGCAATATGTGCGATGAAAAATTCAAGAGGCATTCTAATTTAGTTCAACATCGCAATCGTCACCATTTCCAACTGAAAAAGAAAGTCAAGGATTACATGTGTCAGTGTGGAGAAAtatttcattcgaaaaaaaaactggcCTGGCACAAGGAAGTCCACGATGCCAAGCCCAAGGCTTGCACCCAATGCAGTGAAAAGTTTCTCCACATGTCCAGTTTGACAAGACATATGAGACGAGCACACAACGACAAGTTTTTACCAGAAGATAAACGTCAAAACGAGAATGTGGAATGTCCAATATGTAAGGGTACTTATCTGAGGTCTTCGCTTGATGTTCATATAAAGAGCCACAGCGGTGCCAGGCCGTATTCGTGTGTGATGTGTAACAAAGTGTTTACGACCAAATGGAATCTCAAACTGCATAAGTGGACACATGCGAGTCGCATCTCCAAGCCCTTCAAATGTGACCAGTGCATAGGGGCTTTCATTAGAGAAACTGACTATATAGCTCATATGAATTCACATAAGAGTGTGCGACCATACACCTGCAACTACTGTGGTGCTCAGTTCATTAGAAAATATAACTGTATACGTCATGTGAAAGAACACGAAAATAATAAGACTTTCAGTTGCCCTATTTGTGCAAAATCTTTCCACAGGTCCTATTATTTGAAAGATCACATGAAAGTACACAGTGGAGATCGGCCACATCAATGTGGAGTGTGTGGAAAAACTTCCACGACAAAATCTAATCACAATAAACATACACAAATTCATAATGCTAGAGAACCAGTAagtactgaaaattaa
Protein Sequence: MDSINICCPVCTLFLRPGITLKQHLTSHPKQKVIDALVKLSVVEESPNQKQSVSQQQLQPTNVATAGSSHINTAVVNHSWNQTPPVQLGTPPQVNPSHGNHVFIYQQSMSTTSPQPPVLHVNPLSQQYVYPTAFNPLMMMPYVYQQQQQVILSSNSSLPPQIKALSFDSPNALESQGHEVTVTEDASDAQKECSIVEVHKNVKEAPEENLDDTKIEEELSSSQTITLVKNHKVSINDGNVETMEDFENERMVLNDIPPDEYHSGDEGQCNQSPDHVGHNSSQIDEEVIGSSLSEMNSDWKLESELSKACQTQIASHLSPSLQVVEEELVLENDNTFIQEDQPEYFYMNSQNNEYVEQEPNAYTGQQSTESAPFSSVESTENYEQAEPIYTSANILHGDHLDFVNLDDIIIINEFNPNQVVAQVENFENSSPERPRVLMTIGEIPDHSRIDYMEQRDFEESMSRGSSQVNIRSDERMPARGELSGQESIGGNSDITWNRMQYQEGSSQMSQSYDLIGRGGWEASDSESVDAPAAQQNSTQASYKEDEYEVENNTPIIVSCSGPSLNFKCPSCPINFATSKERKEHELQEHSKKSKLNLIGSEIGKRKIKKLVLKMKPENTEVEHNFDNVFTNKLKQENIAETQSEQVQLETTFKIDEPLESLDLKTICPICDYVCPNSKALKVHKMEVHKKNSAAKHKCLTCGELFPNEYKYTEHLKIHPLECKLCGKLFFRRQNMRLHMKRHLGLKPFKCEICEKSFITRQKYNEHSNIHTGNAPIKCNMCDEKFKRHSNLVQHRNRHHFQLKKKVKDYMCQCGEIFHSKKKLAWHKEVHDAKPKACTQCSEKFLHMSSLTRHMRRAHNDKFLPEDKRQNENVECPICKGTYLRSSLDVHIKSHSGARPYSCVMCNKVFTTKWNLKLHKWTHASRISKPFKCDQCIGAFIRETDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCIRHVKEHENNKTFSCPICAKSFHRSYYLKDHMKVHSGDRPHQCGVCGKTSTTKSNHNKHTQIHNAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00328549;
90% Identity: iTF_00328549;
80% Identity: -