Chae040054.1
Basic Information
- Insect
- Chrysolina haemoptera
- Gene Symbol
- -
- Assembly
- GCA_958298965.1
- Location
- OY282595.1:10699018-10701090[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.001 21 6.4 0.1 35 64 90 119 73 156 0.84 2 5 0.0021 43 5.3 0.0 35 64 189 218 170 255 0.83 3 5 0.00099 21 6.4 0.1 35 64 288 317 269 354 0.84 4 5 0.00099 21 6.4 0.1 35 64 387 416 368 453 0.84 5 5 0.00092 19 6.5 0.0 35 64 486 515 467 560 0.83
Sequence Information
- Coding Sequence
- ATGGTAATCGAATACGAAAACTGTGATGAAGAAGAAAATACCAATGTTGACTTTTCCGCTGTTTTGAAAGTTCGAGCATTATGCAAAGAAATCAAAGCGTCGGCGCAATGGCAGCTTAAATTGAAATCCTCTTGCGAGGTAACTAATGTCAAAATGTTAACGCTTAACGTGCCTACAAGATGGAATTCTACGTTTGACATGATTAAAGTATCATTGGAAATGCGACATCCCCTCAAAGCTCTTTGCGACAACAACgccaaactgaaatttttacgCGTAAATGACAATGAGTGGGATCTACTTAAACAAATATGTGGTCATCTTCATAGTTTCAAATCCTGGTCTACTCTTCTTGGTGGAGAAAAATACGTTACACTACCAATGGTAGTGATGAGCCTCAACATTCTAATCGACAAACTAAAAGAGGACGCACATCATCTAGATCAAAAACTTGATAGAACTGAAGTGCCTACAAGATGGAATTCTACGTTTGACATGATTAAAGTATCATTGGAAATGCGACATCCCCTCAAAGCTCTTTGCGACAACAACgccaaactgaaatttttacgCGTAAATGACAATGAGTGGGATATACTTAAACAAATATGTGGTCATCTTCATAGTTTCAAATCCTGGTCTACTCTTCTTGGTGGAGAAAAATACGTTACACTACCAATGGTAGTGATGAGCCTCAACATTCTAATCGACAAACTAAAAGAGGACGCACATCATCTAGATCAAAAACTTGATAGAACTGAAGTGCCTACAAGATGGAATTCTACGTTTGACATGATTAAAGTATCATTGGAAATGCGACATCCCCTCAAAGCTCTTTGCGACAACAACgccaaactgaaatttttacgCGTAAATGACAATGAGTGGGATCTACTTAAACAAATATGTGGTCATCTTCATAGTTTCAAATCCTGGTCTACTCTTCTTGGTGGAGAAAAATACGTTACACTACCAATGGTAGTGATGAGCCTCAACATTCTAATCGACAAACTAAAAGAGGACGCACATCATCTAGATCAAAAACTTGATAGAACTGAAGTGCCTACAAGATGGAATTCTACGTTTGACATGATTAAAGTATCATTGGAAATGCGACATCCCCTCAAAGCTCTTTGCGACAACAACgccaaactgaaatttttacgCGTAAATGACAATGAGTGGGATCTACTTAAACAAATATGTGGTCATCTTCATAGTTTCAAATCCTGGTCTACTCTTCTTGGTGGAGAAAAATACGTTACACTACCAATGGTAGTGATGAGCCTCAACATTCTAATCGACAAACTAAAAGAGGACGCACATCATCTAGATCAAAAACTTGATAGAACTGAAGTGCCTACAAGATGGAATTCTACGTTTGACATGATTAAAGTATCATTGGAAATGCGACATCCCCTCAAAGCTCTTTGCGACAACAACgccaaactgaaatttttacgCGTAAATGACAATGAGTGGGATCTACTTAAACAAATATGTGGTCATCTTCATAGTTTCAAATCCTGGTCTACTCTTCTTGGTGGAGAAAAATACGTTACACTACCAATGGTAGTGATGAGCCTCAACATTCTAATCGACAAACTAAAAGAGGACGCACATCATCTAGATCAAAAACTTGATAGAACTGAAGTAGACGAAGCTATAATTTCAGCTCTGCAAACTGCTCGCGTTAAAATTCTCAAGCACTACGCCGTTCTAATTTTAGACCCAAGACATAAAATCGAAATCTTCGAACTGACCCAATGGGGACGTCATTTTCGAGATGGTTCTGTTCTAAAATTCGCGGAGTTGTACAAACAAAATGATTATGTTCCACCTCTTAATCAAGCAGATCAAGCTGAAGCTGATGAAGTAATCCAAAATCAACGTTTAACAGCTGATAATGAGAATTTAGCAACTGACTCTGAAGATAATAGTCCACTTgacttcaattttttatttgaaagttctACCTCTTCTACAGACAATCTTATTGACAACCCAAATCTAGAAAAGAAATTGATGAGTAACCTTTCAAGTAAAAGTAAAcgtaaacctaacctaacctaa
- Protein Sequence
- MVIEYENCDEEENTNVDFSAVLKVRALCKEIKASAQWQLKLKSSCEVTNVKMLTLNVPTRWNSTFDMIKVSLEMRHPLKALCDNNAKLKFLRVNDNEWDLLKQICGHLHSFKSWSTLLGGEKYVTLPMVVMSLNILIDKLKEDAHHLDQKLDRTEVPTRWNSTFDMIKVSLEMRHPLKALCDNNAKLKFLRVNDNEWDILKQICGHLHSFKSWSTLLGGEKYVTLPMVVMSLNILIDKLKEDAHHLDQKLDRTEVPTRWNSTFDMIKVSLEMRHPLKALCDNNAKLKFLRVNDNEWDLLKQICGHLHSFKSWSTLLGGEKYVTLPMVVMSLNILIDKLKEDAHHLDQKLDRTEVPTRWNSTFDMIKVSLEMRHPLKALCDNNAKLKFLRVNDNEWDLLKQICGHLHSFKSWSTLLGGEKYVTLPMVVMSLNILIDKLKEDAHHLDQKLDRTEVPTRWNSTFDMIKVSLEMRHPLKALCDNNAKLKFLRVNDNEWDLLKQICGHLHSFKSWSTLLGGEKYVTLPMVVMSLNILIDKLKEDAHHLDQKLDRTEVDEAIISALQTARVKILKHYAVLILDPRHKIEIFELTQWGRHFRDGSVLKFAELYKQNDYVPPLNQADQAEADEVIQNQRLTADNENLATDSEDNSPLDFNFLFESSTSSTDNLIDNPNLEKKLMSNLSSKSKRKPNLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -