Chae029783.1
Basic Information
- Insect
- Chrysolina haemoptera
- Gene Symbol
- clz9
- Assembly
- GCA_958298965.1
- Location
- OY282592.1:14685023-14686939[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-08 2.2e-05 25.8 0.0 2 44 17 59 16 60 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGTCAAAAGTATACACGCAAAACTTCTCGTGCTTCGTGGTCTGAAAAGGATATGGAACGTGCGCTCAAGACAATACATGACAAAGTTGCTTCCATACGAAAAACAGCACAAATGTTCAATATTCCATATGGAACATTACAAGACCGTTTAAGAGGTCGCTTCGCtacaaaaaagtacaaaatggGCAGAAAATCTGTTTTTACTGTTCAGCAAGAAGAAGATCTCGCAAAACATGTTATAAACCTCTCTCGCCTTTTTTATGGACTAACATCTACGTCCATAAGAAAACTTGCATTTGAATTTGCACaaaccaataaaataaaaaacactttTAATAAAGAGAAAGCAATGTGTGGAAAAGATTGGTTCTATGCATTTATGCGGCGCAACCCGACATTGAGCTGCCGTAAACCGGAAGCCACAAGTCTGAGCCGTGTGTTGGCATTCAATAAAGACGAAGTTACgatattttatgataatttaGATAAGCTCTACTCTGAACACACTTTTGAAGCTCATCGCATCTTCAATGTAGACGAAACAGGGATTAGTAACGTTCACGTGCCAAGCCGCATTATTGCCCAGAAAGGTCAAAAACAGGTAGGAGCTGTCACAAGTGGAGAGAGGGGCCAACTTGTAACTGTTGTTGTAGCGATGAGTGCTGCAGGTTCTTTTGTTCCACCGATGTtcattttcaaacgaaaaagaaTGAGAGAAGGTCTAGAAAGAAATGGACCAAATGGTGCTGTATATAGGTGCTCTAAGTCTGGATGGATTACTGAGGAGATTTTTTCAGACTGGATTCAACATTTTGCAAAATTTACAAAAGCTAGTAAAGATGATCCGGTCCTCTTATTGATGGATAACCACTCCACTCATTCAACTTTAACGTCATATCATTATTGCAGAGATAATGGCATTAAAGTTGTTTCAGTTCCACCCCACACTTCGCACCGGTTGCAACCGCTCGATGTTGGTTTTTTCGGACCATTGAAGAGTGCATACAATCAAGAATGCGATAGATATATCAAAGCAAAAAAACACGAGAAGATTCTGCAAACGGATATTGCAGAGTTATTTAAAACTGCTTTTAATAAAGTGGCAGCTGTAGAAAAAGGGGTGAAGGCTTTCGAGACTACTGGCATTTATCCATTTAACCGATCCAATCAAGAACCGACGATTgctgaaacaaatacaataacACGATCTGAGAAAACACTATCTCCTATACCTGGACCATCTAAGATAAAACAACACGATCCACCTTCCTTGAAAAGACCACTTCCTATATCACCTATCTCCACAGTTCAGCAACCATCTCCATTAAAAGCTTCGTCGCCTATCCCTGGACCATCTAAGACAAAACGTCACCGTACACCTTCCTTTAGTAGTGAATCTTCAGAATTAGAGCTTGAAGAAATTGTAGACGATGAATTGACCGACGATGATGATCCGACAGTTCAGCTACCCATGGAAAATAAAAGCTTTGCAGAACTTCTACCCTTGCCAACAGTGACAACTAGAACCAAATCGCGAAAAACCGAGCATTCCCAGATACTGACCTCAACGCCATTAAAagaggaattggaaaaaaaagaagagaagaagcaacaaaaactgaagaagttagaaaaatcaaaaaatattaaacaggAGAAGCTGACAAAAGTTTCACGACGTATAGTTCCCGAAAAGAAAGATAATTCTACAAATGCTGACATATGTTCTGTTTGTCAAGAATTTGGAAAATCAAATGAAGTATGGTGGAGATGCCGTTCATGTGCTGTGTGGACTCATGCAGATTGCACAATCATTGAAAATGCTAAAGATTACATTTGTTCTAAATGTTAA
- Protein Sequence
- MPRQKYTRKTSRASWSEKDMERALKTIHDKVASIRKTAQMFNIPYGTLQDRLRGRFATKKYKMGRKSVFTVQQEEDLAKHVINLSRLFYGLTSTSIRKLAFEFAQTNKIKNTFNKEKAMCGKDWFYAFMRRNPTLSCRKPEATSLSRVLAFNKDEVTIFYDNLDKLYSEHTFEAHRIFNVDETGISNVHVPSRIIAQKGQKQVGAVTSGERGQLVTVVVAMSAAGSFVPPMFIFKRKRMREGLERNGPNGAVYRCSKSGWITEEIFSDWIQHFAKFTKASKDDPVLLLMDNHSTHSTLTSYHYCRDNGIKVVSVPPHTSHRLQPLDVGFFGPLKSAYNQECDRYIKAKKHEKILQTDIAELFKTAFNKVAAVEKGVKAFETTGIYPFNRSNQEPTIAETNTITRSEKTLSPIPGPSKIKQHDPPSLKRPLPISPISTVQQPSPLKASSPIPGPSKTKRHRTPSFSSESSELELEEIVDDELTDDDDPTVQLPMENKSFAELLPLPTVTTRTKSRKTEHSQILTSTPLKEELEKKEEKKQQKLKKLEKSKNIKQEKLTKVSRRIVPEKKDNSTNADICSVCQEFGKSNEVWWRCRSCAVWTHADCTIIENAKDYICSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00910621; iTF_00910611; iTF_00910614; iTF_00910589; iTF_00735468; iTF_00911808;
- 90% Identity
- iTF_00910621;
- 80% Identity
- -