Chae053085.1
Basic Information
- Insect
- Chrysolina haemoptera
- Gene Symbol
- bab2
- Assembly
- GCA_958298965.1
- Location
- OY282601.1:6974061-6978914[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-08 9.6e-06 27.0 0.0 2 43 349 390 348 392 0.93 2 2 7.7 1.7e+03 0.5 0.4 6 18 465 478 461 480 0.81
Sequence Information
- Coding Sequence
- ATGGCCGCCGCACAACAGTACTGCCTTCGATGGAACAACCACCGCTCAAACTTACTAACAGTGTTCAACGAACTCCTCCAAAACGAATCCTTCACCGATGTCACTCTGGCTTGCGAAGGTGGCACCATCAAATGCCACAAAGTGGTGTTGGCAGCCTGCTCCCCCTATTTCCAGAGTTTGTTTACGGGCTTCTCCTGCAAGCACCCTATAGTAATAATAAGAGACGTTAAATACTCGGAAATCAAAGCAATATTAGAATACATGTATAGAGGGGAAGTCAACGTAGCACAAGACCAGCTGGCTGCTCTTCTGAAGATCGCCGAGGCTCTGAAAGTGAAGGGGCTAGTAGAAGAGAACAAGTCGAATAGAGATGGAGATAGTTCTACGAAGGAAGAAGAGTACTCGATGGACCACTGCCCCGCTGTCTCAACATCCAATTCCACCATGCTCAATACAGTTCACAGTAGCAGCAGTAACACGTCTCCACCCCATTCAACCTACAGAAGCCCCTACAACCCATATAGCAATAGGTCGCAAGATTCTCGAATGAATCTCCCAATGTGGGCAGTTCCGGGAATGTCTCCACATCCAGTCTCCGTACCAAACCCCAATCACACGACGAGTTCATCAATGCTCAATAGTAGTAATGATGTCGCTAGCTCTGATATGTCTCCGTTTAGGAAGAAGAAGTTGTCCAGTTTGTTGATGACGAGAGATACGCCCATTCTGAGAACCGTTTTGGGACAAACTCAGGCTGATTCGTCTCAACCGGTCAGTTTGGTGTGCCATCCGGATAATGGCGATCATCTGAACGGCAATGAGGATAGACTAATACAGCACATGAAAAATGAACCTTCCGAAGACGCCCAATCGCCCTACACCAACTTCACCCCTATGGACGACGAAGAAAACAAATCCAAACTGGCCGTTCCATCTTCATCACCCCAATCATTTAGCCACGAAATGAGAGGCGTACCACCCTCTCGTATTGCAACCTACGTTCCACCACAAAAGCAGGAATGGAAACGCTACAAACAATACTCCAGAGAAGACATTATGTCAGCCATAGAACTAGTGAAAAAAGGTACGTCAGCCTTGAAAGCAGCCGAATTGTTCAATGTACCATCTAGGACCTTGTACGATAAGGTGAAGAAGCTGGGGATATCAACCACTAAGCCGAACAAGAAAGGTGGTAAAGGAATGTCGAATTGCTTTCCTTACGGTACCACTCCTTCATACGGTGGGCATATTTCGAAGAGTAATGAGAGAGCCATGAAGGTCATAAGAGCTATGAATAATAACTCGGCGTTGAAAGAAGCCAATAGTTTTCTCCACCACACCATCGATAGTAGAGGAGGTGATGAACGCGAAGCTCTAGCTGCCATGGCGGCAGCTGCAGCTGCCCACGCGGTAGCTTCTGGTCATTCAACTAGCCCCAACAACCACGGACGCGCGAGGAGCCCCAGTCCCAGTCCCACTATGCTAAAATATATGCAATATGTCAGTATGACCCCCTCCCCCGCCGCTCCTGGAAGCGATCAACACAACTCACCCAGCGAAACCAACGGCAGCTCAGAACGAGATTACGAAGATGAAGAAGACCAAGTGGAAGACCTCTCCATGACCAGGAAGGAACCTAAGGAATCTAGGGTTATTATGCCTCCAATGAATCAGATTTTGACAATCATGAAAAAGGAGGAGCTTTTGATAACCAACCTCAACGAGGAGGCCAAGAGGATGAGCCTCGAATGTGAAGGGGAATAA
- Protein Sequence
- MAAAQQYCLRWNNHRSNLLTVFNELLQNESFTDVTLACEGGTIKCHKVVLAACSPYFQSLFTGFSCKHPIVIIRDVKYSEIKAILEYMYRGEVNVAQDQLAALLKIAEALKVKGLVEENKSNRDGDSSTKEEEYSMDHCPAVSTSNSTMLNTVHSSSSNTSPPHSTYRSPYNPYSNRSQDSRMNLPMWAVPGMSPHPVSVPNPNHTTSSSMLNSSNDVASSDMSPFRKKKLSSLLMTRDTPILRTVLGQTQADSSQPVSLVCHPDNGDHLNGNEDRLIQHMKNEPSEDAQSPYTNFTPMDDEENKSKLAVPSSSPQSFSHEMRGVPPSRIATYVPPQKQEWKRYKQYSREDIMSAIELVKKGTSALKAAELFNVPSRTLYDKVKKLGISTTKPNKKGGKGMSNCFPYGTTPSYGGHISKSNERAMKVIRAMNNNSALKEANSFLHHTIDSRGGDEREALAAMAAAAAAHAVASGHSTSPNNHGRARSPSPSPTMLKYMQYVSMTPSPAAPGSDQHNSPSETNGSSERDYEDEEDQVEDLSMTRKEPKESRVIMPPMNQILTIMKKEELLITNLNEEAKRMSLECEGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00329750; iTF_00327899; iTF_00328334;
- 90% Identity
- iTF_00329750; iTF_00327899; iTF_00328334;
- 80% Identity
- iTF_00329750;