Basic Information

Insect: Chrysolina americana
Gene Symbol: bab2
Assembly: GCA_958502065.1
Location: OY293415.1:14522690-14527036[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.7e-08 1.1e-05 26.9 0.0 2 43 349 390 348 392 0.93

2 2 2.2 5.2e+02 2.4 0.6 6 18 465 478 461 480 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.7e-08	1.1e-05	26.9	0.0	2	43	349	390	348	392	0.93
2	2	2.2	5.2e+02	2.4	0.6	6	18	465	478	461	480	0.88

Sequence Information

Coding Sequence: ATGGCCGCCGCACAACAGTACTGTCTTCGATGGAACAACCACCGCTCAAACTTATTAACAGTGTTCAACGAACTCCTGCAAAACGAATCTTTCACCGATGTCACTCTGGCATGCGAAGGTGGCGACACCATCAAGTGTCACAAAGTGGTTTTGGCAGCCTGCTCCCCCTATTTCCAGAGTTTGTTCACGGGCTTCTCTTGCAAGCACCCCATAGTAATAATAAGAGACGTCAAATACTCGGAAATCAAAGCAATATTAGAGTACATGTATAGGGGGGAAGTCAACGTAGCGCAGGACCAGCTGGCCGCTCTTCTCAAGATCGCCGAGGCTCTGAAAGTCAAGGGGCTAGTAGAGGAGAACAAGTCGAATAGAGATAGAGAAAGTTCTACGAAGGAGGAAGAGTATTCGATGGATCACTACCCCTCAGTCTCCACCTCCAACTCCACCATGCTCAATACAGTtcacagcagcagcagcaatACGTCCCCTCCGCATTCAACCTACAAAAGCCCCTACAACTCGTATAGCAATAGGTCGCAAGATCCTCGAATGAATCTCCCAATGTGGGCAGTTCCCGGCCTGTCTCCACATCCAGTTTCCGTATCCAACCCCAGCCACACGACGAATTCATCGATGCTCAGCAATAGTAACGACGTTGCTAGCTCGGATATGTCTCCGTTTGGCAAAAAAAAGTTGTCCAGTCTGTTGATGAACAGAGATACGCCTATTTTGAGAACCGTTTTGGGACAAACCCAGGCCGATTCGTCCCAACCTGTTAGTCTGGTGTGCCATCCAGATAATGGAGATCATTTGAATGGCAATGATGATAGACTAATACAGCATATGAAAAATGAACCTTCCGAAGACGCCCAATCGCCCTACACCAACTTCACCCCTATGGACGACGAAGAAAACAAATCCAAACTCGCCATCCCATCCTCCTCACCCCTACCATTCGGCCACGATATGAGACGCGAACCTTCTCGCATCGCTACCTACGTTCCACCACAAAAACAGGAATGGAAACGCTACAAACAATACTCAAGAGAAGACATAATGTCAGCCATAGAACTAGTAAAGAAAGGAACGTCAGCCTTAAAAGCAGCCGAACTATTCAACGTGCCATCTAGGACCCTGTACGACAAGGTAAAGAAGCTGGGGATATCAACCACCAAGCCCAACAAGAAAGGCAATAAAGGAATGTCGAATTGCTTTCCCTACGGCACCACTCCTTCCTACGGCGGGCATATTTCGAAGAGCAATGAGAGAGCCATGCGAGCCATGAGAGCCATGAACAATAACTCGGCATTGAAAGAAGCCAGTAGTTTCCTCCACCACACCATCGACAGCAGAGGAGGCGACGAACGCGAAGCTCTAGCTGCCATGGCGGCGGCCGCAGCTGCCCACGCGGTAGCTTCCGGTCAGTCAACTAGCCCCAACAACCATGGACGTGCGAGGAGCCCTAGCCCCAGCCCCACTATGCTGAAATACATGCAGTATATCAGTATGACCCCCTCCCCAGCTCCCGGAAGCGATCACCACAACTCTCCCAGCGAAACCAACGGCAGCTCAGAACGAGACTACGAAGACGAAGAAGACCAAGTGGAAGACCTCTCTATGAATAGGAAGGAACCACCGAAGGAATCCGCCAGGGTTATTATGCCTCCTATGAATCAGATTTTGACAATCATGAAGAAGGAGGAGCTCTTGATAACCAACCTCAACGAGGAGGCCAAGAGGATGAGCCTCGAATGTGAGGGGGAATAA
Protein Sequence: MAAAQQYCLRWNNHRSNLLTVFNELLQNESFTDVTLACEGGDTIKCHKVVLAACSPYFQSLFTGFSCKHPIVIIRDVKYSEIKAILEYMYRGEVNVAQDQLAALLKIAEALKVKGLVEENKSNRDRESSTKEEEYSMDHYPSVSTSNSTMLNTVHSSSSNTSPPHSTYKSPYNSYSNRSQDPRMNLPMWAVPGLSPHPVSVSNPSHTTNSSMLSNSNDVASSDMSPFGKKKLSSLLMNRDTPILRTVLGQTQADSSQPVSLVCHPDNGDHLNGNDDRLIQHMKNEPSEDAQSPYTNFTPMDDEENKSKLAIPSSSPLPFGHDMRREPSRIATYVPPQKQEWKRYKQYSREDIMSAIELVKKGTSALKAAELFNVPSRTLYDKVKKLGISTTKPNKKGNKGMSNCFPYGTTPSYGGHISKSNERAMRAMRAMNNNSALKEASSFLHHTIDSRGGDEREALAAMAAAAAAHAVASGQSTSPNNHGRARSPSPSPTMLKYMQYISMTPSPAPGSDHHNSPSETNGSSERDYEDEEDQVEDLSMNRKEPPKESARVIMPPMNQILTIMKKEELLITNLNEEAKRMSLECEGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00329212;
90% Identity: iTF_00329212;
80% Identity: iTF_00328334;