Basic Information

Insect: Chrysolina haemoptera
Gene Symbol: rfx7.L
Assembly: GCA_958298965.1
Location: OY282595.1:7912932-7924916[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-33 8.3e-29 101.8 0.2 4 77 123 196 121 198 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-33	8.3e-29	101.8	0.2	4	77	123	196	121	198	0.97

Sequence Information

Coding Sequence: atggaaaatgaaatatgggtTCCAAAATATCAACAATCTGTACCGACAAGTTTAGAAAGGACGGAGAAGCATTTAAACAATGGCAACACAGAAAACGAAGGAGAGGAAGGCGAATTAAAAAAAGCCGGCGAAGaagaatatgaaaatttcatcaaaagtgAGCCCGATCATGATCCTGGTCCAATCAGCTTAACCATTAGTGAGACTGCGAAGCAGACAATACATACTATTTTGGAACTGATAAATCCACTATCTCAAGTTGAAAAATTTCTACTATTTCTAAAACTGCCAGGTGAAGTCACCAATGCTGTGGATCCTTTCAGACAAACTTTAAATCCTCTTGGCAGCCGTACAGAAATTTATAGGACAATATCATGGATAAAGACGCATTTGGAAGAAGATCCAGACATTTCACTACCAAAACAAGAAGTTTATAACGATTATCACAACTACTGTGAGACAAACATGATCAAACCATTGTCACAAGCAGATTTTGGAAAAGTGATGAAGCAAGTCTATCCGAAAGTGCGTGCTAGGAGATTGGGGACAAGAGGAAATTCTAGATATTGTTACTCGGGTTTGCAAAGATGTGTGACGCTGAAAACTCCCAAACTTCCGGATTTAGCAGATAAACCATTGTCAACAGAGGCTCCATTCACTCAATCAAGTTTAACATCGGCAGCATGGTTGATTGTGAAAGAATGGTCGGAACAACAACTAAATCAAAAGTTCGATTCTATTCAAGCTCTGGCTTATCATCTGATAATGAACCACTCAGTCAGCACAGGATCTGAAGCTGCCTCAAAAATTGCTTCTGCCAGTGAATCTTCTCTTAAAGGAGAAgaagaaaattacaaaagtggaaataAGCATAGGGAAATGCAGCTGCAGCTTCAGAGGAAAATTCAGCAAAAAAATGAGGGgagagaaagaaaaagaaaaatgcaGTCGCCAAAGTCGGAACAAAGACCCAGCTTGAAGAAGACGCGTTCGCAGAGCGTCCCCGCCCCGACGGCCGTCTCGCCGACGACGATGCACAGCAGCGGCTTAGTCAGCGGAGAGTGCAGCACGGCCAGCAGTTGTAGCAGTACGAGTCCCACTCAGGGAAAATCTATCTGTGATAAATCACTAGAGTTCACTCAAGTACCAGCGTTACCTGACTTCAATAGTTTCCAGAAGCCGGCGGTGGAAGGGGTTCTAGGCGGTGGCAGACAGGAAACACTGGTGGCCTCAGTTAATAAGGTAGCAATACCTAGACTGCAGCCAGCCGCGGTTCCGTTAAACACACCCCCTAGGAAGCAAGCAAAGTACAAATCGCTCCGGCCCAGACTGCAACATTGTGATATTGCGTCGTACAACCCGCAGCTGATGCAAACTACATCGGCTGAGGAAAACAGATCTCAAGACTTAAATGATATAGGTAGGATTAAGGAAAGAAACAGTGATGATGAAGAATATGATGTCCCCAATTTTCCTCTTACTAGAGAACGGCTCGATAGCGTCAGCAACGTCTCCAAGGATGCCATGGACGAGTATTTAGGTACCAACAGCCAACATGAAGAAGaactctccaaatatttcagtaataataACGTTAACGAAACGACCGATTCAGAAAATACAGACAAACTATCGACTCTTAGGCAACTGCTCGTACAAAATTTTGTCGACAACAAATCGTCAGCGGTGACGGCACAGCACAACAGGTTAATACAGGAGAGCATTCCCTTTGCGAATGCCAGTCTTAGTAAACCGCCAATACAAAACGAAACAACTTACATAACCCCAATTATTCGTCAAGGATGTTTGCCTCTCATACCGACCAACTCTAAAAGAAGGGTTAGTTTTGAGACACACGTTTCAGATGACACGGCAGTGCCTCCCAGCCCGAACACCAGAAGGAAAGATTTCAATTTCACTCCAATATCTCCTGGCCCCCAGTCACCTAGCGGTATGCAGTCCAAGTGTTCCAGTACTACTGCCAGTCCATTTGTGAGTCCAAGAAGCACTCCGGTTATGAGAACGAAAACCGTCTATCAAAACACAGGCATTTTGAAAAACGAATTGAGGAAACCTCTCAAAGCGAAGCGAGAGATTAATCTCACAGTAGAGATCCCCAGTGAAGGCCAGTTTTCGAGCAGTTCGCTTCCCATGTCCGCCCCAGTCAGTCCAATGTTAGGCAGTAAGTCAGTTTTGCATAAGCTCTTGAATTCCAGTAGCAAAGTAGAGTACAGTCCGGGTTATGCGGCTTCTCAAAGCGTTGCCGCACAGCCAGATACTTCTCCAGAAGGCAGCCAGTTCTACGCTTCGAATATTGAGTCAAATTTGGAAATGTACAGGTCCCAGCCTGTTCCGTTGCACAACATGGTCGCTCCAATCGAGGAGATGCTAGTGCCCGAGCAGTCTGTGCCTGTGGATGATTTTCCAGAAATTGACCCGATACCTGATTCTGAAAGTGATAACGTTAAACGAATTTTGAATTCTCTTGACGGCCAATCTTGTGATAACAACAACATCGATTTATATAACGTTCACATTACCTCCAACAACGCTTGTTTGTCCGAGTTTGGGCTCCAAATTGACAATGGAAATCAGCACATTAGCAGTTTCTCCCAAAACGATGTGAGTTTCTCTAGCGTTCACATGGCAAGGAATGTACGTTCTCACAGTATCGGAGATGTCATTATGACTTACCAGCCGAAATGCTTACCATCTAGATCTGTTCCGAGCACACCTTTACCCTTCTCTCAACTCGTTGAAGACCCTCTGAAGGCGAACTACACGAATTCGAGATCTTATCCCTCGACACCTAGGACAACTGACGAACAGTTCACTTATACTATTAATGGGGACTGTTTGCTGAACGGACAACGCATCAGGACGGACAGCGTAGATAATATGGAATTCATGGGGAATTACGAATTAAATAGTGATAGCAACGTTGAACAGCTGGCTCAAGACAAGGGTTTCAGCATAGATGGTGAGTTTATAATAGAGAATGACACGCAACTCATAGGTACGGTGTTGATGGAACAGAATTACAACAGTAACATTGACTAA
Protein Sequence: MENEIWVPKYQQSVPTSLERTEKHLNNGNTENEGEEGELKKAGEEEYENFIKSEPDHDPGPISLTISETAKQTIHTILELINPLSQVEKFLLFLKLPGEVTNAVDPFRQTLNPLGSRTEIYRTISWIKTHLEEDPDISLPKQEVYNDYHNYCETNMIKPLSQADFGKVMKQVYPKVRARRLGTRGNSRYCYSGLQRCVTLKTPKLPDLADKPLSTEAPFTQSSLTSAAWLIVKEWSEQQLNQKFDSIQALAYHLIMNHSVSTGSEAASKIASASESSLKGEEENYKSGNKHREMQLQLQRKIQQKNEGRERKRKMQSPKSEQRPSLKKTRSQSVPAPTAVSPTTMHSSGLVSGECSTASSCSSTSPTQGKSICDKSLEFTQVPALPDFNSFQKPAVEGVLGGGRQETLVASVNKVAIPRLQPAAVPLNTPPRKQAKYKSLRPRLQHCDIASYNPQLMQTTSAEENRSQDLNDIGRIKERNSDDEEYDVPNFPLTRERLDSVSNVSKDAMDEYLGTNSQHEEELSKYFSNNNVNETTDSENTDKLSTLRQLLVQNFVDNKSSAVTAQHNRLIQESIPFANASLSKPPIQNETTYITPIIRQGCLPLIPTNSKRRVSFETHVSDDTAVPPSPNTRRKDFNFTPISPGPQSPSGMQSKCSSTTASPFVSPRSTPVMRTKTVYQNTGILKNELRKPLKAKREINLTVEIPSEGQFSSSSLPMSAPVSPMLGSKSVLHKLLNSSSKVEYSPGYAASQSVAAQPDTSPEGSQFYASNIESNLEMYRSQPVPLHNMVAPIEEMLVPEQSVPVDDFPEIDPIPDSESDNVKRILNSLDGQSCDNNNIDLYNVHITSNNACLSEFGLQIDNGNQHISSFSQNDVSFSSVHMARNVRSHSIGDVIMTYQPKCLPSRSVPSTPLPFSQLVEDPLKANYTNSRSYPSTPRTTDEQFTYTINGDCLLNGQRIRTDSVDNMEFMGNYELNSDSNVEQLAQDKGFSIDGEFIIENDTQLIGTVLMEQNYNSNID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00755189;
90% Identity: iTF_00327597;
80% Identity: -