Basic Information

Insect: Chrysodeixis includens
Gene Symbol: Sall1_1
Assembly: GCA_941860345.1
Location: OW796102.1:1412300-1422654[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.8 1.4e+02 3.5 0.4 2 23 6 27 5 27 0.96

2 13 0.0019 0.15 12.9 1.1 1 23 998 1021 998 1021 0.92

3 13 1.1e-05 0.00086 19.9 1.8 2 23 1122 1143 1121 1143 0.97

4 13 0.00087 0.066 14.0 2.6 1 23 1149 1171 1149 1171 0.98

5 13 0.068 5.2 8.0 3.3 2 23 1178 1199 1177 1200 0.94

6 13 0.044 3.4 8.6 1.2 5 23 1213 1231 1212 1231 0.96

7 13 0.02 1.5 9.7 1.0 3 23 1238 1259 1237 1259 0.96

8 13 0.00081 0.062 14.1 0.4 2 23 1279 1299 1278 1299 0.98

9 13 0.002 0.15 12.9 1.1 3 20 1307 1324 1305 1327 0.86

10 13 0.0045 0.34 11.8 1.3 1 23 1335 1357 1335 1357 0.98

11 13 0.0047 0.36 11.7 7.2 1 23 1363 1385 1363 1385 0.98

12 13 5.9e-06 0.00045 20.8 1.4 1 23 1391 1415 1391 1415 0.98

13 13 0.00086 0.066 14.0 5.1 1 23 1421 1443 1421 1444 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.8	1.4e+02	3.5	0.4	2	23	6	27	5	27	0.96
2	13	0.0019	0.15	12.9	1.1	1	23	998	1021	998	1021	0.92
3	13	1.1e-05	0.00086	19.9	1.8	2	23	1122	1143	1121	1143	0.97
4	13	0.00087	0.066	14.0	2.6	1	23	1149	1171	1149	1171	0.98
5	13	0.068	5.2	8.0	3.3	2	23	1178	1199	1177	1200	0.94
6	13	0.044	3.4	8.6	1.2	5	23	1213	1231	1212	1231	0.96
7	13	0.02	1.5	9.7	1.0	3	23	1238	1259	1237	1259	0.96
8	13	0.00081	0.062	14.1	0.4	2	23	1279	1299	1278	1299	0.98
9	13	0.002	0.15	12.9	1.1	3	20	1307	1324	1305	1327	0.86
10	13	0.0045	0.34	11.8	1.3	1	23	1335	1357	1335	1357	0.98
11	13	0.0047	0.36	11.7	7.2	1	23	1363	1385	1363	1385	0.98
12	13	5.9e-06	0.00045	20.8	1.4	1	23	1391	1415	1391	1415	0.98
13	13	0.00086	0.066	14.0	5.1	1	23	1421	1443	1421	1444	0.95

Sequence Information

Coding Sequence: ATGGACCAGCTTGTGCAGTGTCCTGTGTGCACGCTGTTCCTGCACAATGGGATGACCCTGGAGTCTCATTTGGACACACATCCTAAAGACCAGGTTATTAAGGCATTGTGTAGCTTGACATCAAGCAAGCAAGGCTCTAATTATGGAAGCAGGACTTCCACACCTATGCATTCAGAGCGGTCCTATAGGAGTAGATCACGGACACCTGCTACTGATGACAGTGCCAAATGGAATGGAACAAGAGGTGCAGAACATGACAGGTTTTGGAGAAGAACACCAAGCAGATCAGCTAAAAACACTTCTCAGTCTCACCCATCTAGAAATGCCACTCCAGATATTAGGATTTTGGATGTTAACTTTGAAAATCATTCTGTTTCTGGTGCTGGACCAGGACAGCATGCTGGCAATGTGTTTCATATGAAAAATGATAAAAATCAAGACACCTTTCAGAACCCTCCAGTGCCAGACTTTGAGCCGCAATATGCTTACTATCCTGATCAACAGGAAGACAGAGAGATCAAGTTCTCCCGGAGTGCGGAATACAGTGCTATGGATAGTAACAATTTGTTTACCTATAATGTGCCAACCTTGGGAGGGTCAGGTGTGAAGTTGGTACCAGCAGTGCCTAGAAGAGGGAATGACCTTGTCAAAGTTCTGCCCAAACCAAATAATATACTCCTTAAAAGTAATATGAGTGGTGTTCAATATTTACCACCCGGGGTGAAGCCCATGCATGTTGTGCTGCCATCAGCACCAGCATTTGTACAGAAAAGTTTGCAAAACAACATGATTATGCCAAGTAACTTACAGAACACACAAGTGCAAATGAATACCAAATCAGCTACACCCCCTATAGCTAGCAACCAACTTAACCAAATTACTTCTGGTGCTTTCACTCCAGCGTCAACTGTTGTTACCCAAAACTCCCAAATAATTTATAGAGAAATGGTTCACAGCATAGATGGTAAACCTTTTATAACTTCTATGCCTACCATCTTGGGTGGTGAGAATGTTACTAATTTAGCTCAAGCTAGCTCTATGTATCAAAATGTTATGGTGGTAGACCAGTTTGGAAACACTTCATGTATGTACACAACCCCTCAACAAGTTATGACTAAATCTTGTCCTACAAATATGTATGAAGAGAGTGGACCTCCTGTACCTAGTATACACATGGATAAATCCGTTGAAAATATAAATGACCCTAAAACAATTATAATTGAAGTTGGCCCTCTTGTAGCCTCTCCTGAGAATGAAGAACCAATATGTACTGTAGCTCCACAGCCAAGCCTGAGAAGTCCAGTAGAGAAACCTGACAAATCCCCGGAACCTGTAGACCCTAAAGGTGATGCCTCAGGATCTAGTAAAGGCTTAAAAATTTTAAGTAACATCAAGGTTGAAGTTCCAGTGCAACATCACAAGAATATGGTGAACACTGTAATGGATCTCACAGGATCTAGTGATGGAGATTATGCTGTTGAGAGATCCGATACACCTGAGAAGATTTTGCCAGACCTTGATGATAACAATCAATTGATGTCTGATGACACCCAGCCATCGTCAATATCTAGTGTTGATAGCATGGTCTCCCATACGTTTTCTGTGATAAAGAATGTTGGTAACCCCAGCAAAACCTCAGGAGATAATAAAATGGACACAGACTTTTCAGACAGCTGTCCTGTTCCCGATTTAATTTGTAATGAGAAACCTTCCATATCACCTTGTAGCGAATTATCTGAGAATTGCGACAATTCTACCGATCGTACCTCAATTTCTCCAAAACCTGAGAGCCGTGAAGTTAGTATAGAACTTCCCGAAAAGAAGATTCAGCTCTCTCAGAAGCCTGTAAGGCACAATACACTAAGACTGAACAATATTTATGTAAAGAAGCACAAGAAAGTTTTGCAAATTAAAAATGCTAAAACATTTCCCATAAAAGCGGCTGCTAAAAGTGACACAGACACTACTCCGACGTCATCGGGGTGCAGATCACCGGAAAATTTTACAATGAATAAAATTCATCAAACTGATAGGAAAGAAAATAAGGAGAAGCCAAACTTACTGCAAACTATATCTGTAGAGGAGATCAAAGATCAAGATGATAATAATGACTTTGATGCTGACACAGAGGAACAATCCATGGATATAGAACCTGTTGCGCCCACAAGCTTAGACCAAGCAGAAGAGTATGTTGGGGGCCTGGACTTGGTGCAAGTCAAAGAAGAAATAAACTCCAGTAACGAAGGGGGGTTCAGTAACGAGACGGTGACGTCGGACCAGGACCTTGCTCCGCTAGAAACGTTACGACCTATCAATGTTATCACTTATGGAAATATACCTAATCAAGATTTCAATGAAGAATCTAACGACAGAGAGTTGTTAGACCTCGAAGCTGCCTCCAAAAATAAACAGTTCGTAAGTATGATGAACGAAAACTACTTCGGTGATAATATTTACGCAGATTATTTTACTCCCGACCGTGTCGAGGCGTTCGACGCTGAGCGCGAGGCGGCAGCATTTAAGGAAGGTCCCAAGGAAGGTATATATCTCTGGGGTGAGCCCTCTCAGAAAGAAAATGAGTTTGTTCTGCCCAACTTCATACACGAGAGTTACAAAATAGCTGAGAGTAACGGAATAGATTATTCTGAGTTGGGTGTCAGAGAGGTGCAGGTAGATGTGGAAGTGGATGGGTGTGAGCGGGACAGCAAGGCCGACGTGCTGAGCGAAGGTCGCAGCGAGAGCGAGGCGCCCATCAACATCTGCGCGGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGCGACATGGAGTCACCTTGGAGTGGAATGTACACCGAGGTTCCGCCTGCCGAGCCGTACGACCTGATCGCTCGCGAGAGCTGGGTGTCCGACGGCTCCGATGTCGACGCCAGCGAGAAGAGGGAACCCATCGAGGAAGACCTGGCTCTGCCAACCCCGTTCCCGAAAGCCCGGTTACACACGTGCCTGCAGTGCGGCACGAAGTTCCCGACGCTGAAGGAGCTGCGCGCGCACAAGACGCTTGCGCACGCGCTGCCCACCTGCTCGGTCACCAAGACCTCGTACTCCCGCCTCGTCACCGCCAGGACCATCAAGAAAGAGGAGAAACCTGATCTGACAAACGGCCTCATGGCACTGGATTCGAAAGAAGCAATAACATCAACGATACTAGAGGTGTATGACACATTGGAGTCGAAGCCTAAGATCGAGGTGGACCGGATCATCAAGCAGGAGACGAAGCGGCGGCGGAGAGACTACACCTGCAGCACCTGCAAGGTGGACCAGCTCACCGAGGTGGCCTACCAGGCGCATCTGAAGATACACCCGCTGGAGTGCCTCACCTGCGGCAAGTGCTTCTACCGGAGAGCCAACCTCGCGCTACACTTAAAGACACATTTAGGAATTAAGAATTTTAAATGCGAGGTGTGCGAGAAGCGGTTCGGCACGCGGCAGAAGCTGAGCGAGCACCACAACGTGCACACCGGCCGCGCGCCCGTCAAGTGCACGCTCTGCAGCGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGAGACCGCCACCACCTGGCGAAGCGCGCGAAGGTGCGCGACTTCGTGTGCCAGTGCGGCGTGGTGTTCCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCGCCGCGGCCGCGCGCCTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCCTCGCTCGCGCGCCACCTGCGCCGCAAGCACAACCACCACTTCCAGCCGCCGCAGCCCGCGCCCGGACACGCCGCGCCCGACAACGTGCAGTGCCCCGTCTGCAACCAGGTGTACCTGAGGTCAAACTTAAGGACGCACTTACAAACGCACAGCGGCCAGCGGCCGTTCCTGTGCATCATCTGCAACAAGTCGTTCACGACCAAGTGGAACCTGAAGCTGCACCGCTGGACGCACATGAGCCGCTCGGCGAAGCCCTACAAGTGCTCGCTGTGCAAGGGCGCCTTCATCCGGCACACGGAATACATATCACACATGAACGCGCACAAGTCCGTGCGGCCCTACACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGGCACGTGCGCGAGCACGAGATGGCCAAGAAGTACGTGTGCAAGGTGGCGGAGTGCGGCAAGTCCTTCCACCGCAGCTACTACCTGTCCGAGCACATGAAGGTGCACAGCGGCGCGCGCCCCTTCTCCTGCAACATCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTGAAGATCCACCACGCGCGCGAGCCCGTCGCCACCGAGGCCTAA
Protein Sequence: MDQLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCSLTSSKQGSNYGSRTSTPMHSERSYRSRSRTPATDDSAKWNGTRGAEHDRFWRRTPSRSAKNTSQSHPSRNATPDIRILDVNFENHSVSGAGPGQHAGNVFHMKNDKNQDTFQNPPVPDFEPQYAYYPDQQEDREIKFSRSAEYSAMDSNNLFTYNVPTLGGSGVKLVPAVPRRGNDLVKVLPKPNNILLKSNMSGVQYLPPGVKPMHVVLPSAPAFVQKSLQNNMIMPSNLQNTQVQMNTKSATPPIASNQLNQITSGAFTPASTVVTQNSQIIYREMVHSIDGKPFITSMPTILGGENVTNLAQASSMYQNVMVVDQFGNTSCMYTTPQQVMTKSCPTNMYEESGPPVPSIHMDKSVENINDPKTIIIEVGPLVASPENEEPICTVAPQPSLRSPVEKPDKSPEPVDPKGDASGSSKGLKILSNIKVEVPVQHHKNMVNTVMDLTGSSDGDYAVERSDTPEKILPDLDDNNQLMSDDTQPSSISSVDSMVSHTFSVIKNVGNPSKTSGDNKMDTDFSDSCPVPDLICNEKPSISPCSELSENCDNSTDRTSISPKPESREVSIELPEKKIQLSQKPVRHNTLRLNNIYVKKHKKVLQIKNAKTFPIKAAAKSDTDTTPTSSGCRSPENFTMNKIHQTDRKENKEKPNLLQTISVEEIKDQDDNNDFDADTEEQSMDIEPVAPTSLDQAEEYVGGLDLVQVKEEINSSNEGGFSNETVTSDQDLAPLETLRPINVITYGNIPNQDFNEESNDRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAEREAAAFKEGPKEGIYLWGEPSQKENEFVLPNFIHESYKIAESNGIDYSELGVREVQVDVEVDGCERDSKADVLSEGRSESEAPINICADERMPPRGELSGQESNGDMESPWSGMYTEVPPAEPYDLIARESWVSDGSDVDASEKREPIEEDLALPTPFPKARLHTCLQCGTKFPTLKELRAHKTLAHALPTCSVTKTSYSRLVTARTIKKEEKPDLTNGLMALDSKEAITSTILEVYDTLESKPKIEVDRIIKQETKRRRRDYTCSTCKVDQLTEVAYQAHLKIHPLECLTCGKCFYRRANLALHLKTHLGIKNFKCEVCEKRFGTRQKLSEHHNVHTGRAPVKCTLCSDTFRRYSNMVQHRDRHHLAKRAKVRDFVCQCGVVFHSRAKLRWHQETHAPRPRACLYCSDKFVHAASLARHLRRKHNHHFQPPQPAPGHAAPDNVQCPVCNQVYLRSNLRTHLQTHSGQRPFLCIICNKSFTTKWNLKLHRWTHMSRSAKPYKCSLCKGAFIRHTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00000602;
90% Identity: iTF_01487998;
80% Identity: -