Cinc015864.1
Basic Information
- Insect
- Chrysodeixis includens
- Gene Symbol
- Lztr1
- Assembly
- GCA_941860345.1
- Location
- OW796109.1:8060574-8078123[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.8e-07 8.6e-05 23.0 0.0 4 40 366 403 363 406 0.88 2 5 1.4e-06 0.00044 20.7 0.0 8 40 457 490 454 493 0.90 3 5 6.4e-15 2e-12 47.6 0.0 4 109 521 657 518 658 0.85 4 5 2.1e-16 6.6e-14 52.3 0.0 8 97 841 930 836 945 0.85 5 5 2.1 6.6e+02 0.8 0.0 77 106 944 973 933 976 0.80
Sequence Information
- Coding Sequence
- ATGACATCTGTTACCCTGGCGAAGATGATATCAGAACAGCTACGAAACCCGAATGACCTGGACATCAACCTTAGAATGGAGTTTGGTCCATTCGAGACTGTGCACAAGTGGAAACGCATGTCAGAGTGCTATGAATTTGTTGGTGCCAGACGAAGCAAACACACAGCAGTGGCATACAAAGATGCTATCTATGTATTTGGAGGTGACAACGGCAAGTCAATGCTAAATGATCTGATCAGGTTTGACATCAGAGAGAAATCCTGGACCAAAACAGGATGCATGGGAGTCCCACCCGCACCTAGATACCATCATTCAGCAGTGGTGCATCGTTCATCAATGTTTGTGTTCGGCGGCTACACAGGCGACATACTCGCCAACTCGAACCTGACAAATAAGAACGATCTCTTTGAATACAAGTTCACGAGCGCGCAGTGGGTGCAGTGGAGGTTTACAGGACAAGAACCAGTCCCGCGTTCGGCTCACGGCGCGGCGGTGTACGATGACAAGCTGTGGATATTCGCCGGCTATGACGGCAACGCGCGCCTCAATGATATGTGGACTATCAATCTGAAGGGCGAGAGTCACCAGTGGGAGCATGTAGAACAGAAGGGGCAGTGCCCCCCCACCTGCTGCAACTTCCCCGTCGCGGTCGCGGGAGGCAAGATGTTCGTGTTCAGCGGACAGAGCGGCGCTAAAATCACTAACGCCCTCTTCCAATTTGATTTTGAAACTCACACTTGGTCCCGTGTATGCACGGAACACTTGCTGCGTAGCGCGGGCGGCGCGCCGGCGCGTCGCTACGGCCACGTGATGGTGGCGCATCGCTCGCATCTCTACGTGTTCGGCGGCGCCGCGGATAATACCCTGCCCAATGATCTGCACTGCTACGATCTGGATACGCAGATATGGTCAGTGATCCAACCAGCGTCAGACTCTCAGATCCCGTCGGGACGGCTGTTCCACGCGGGTGCGGTGGTGGGCGACGCGCTCTACATCTTCGGCGGCACTGTCGATAACAATGTGCGCAGTGGAGAACTCTTCAGGTTCCAGCTTTCGAACTACCCTCGCTGCACTCTACACGACGACTTTGGGCGCATCCTAAAGTCCCACCAGTTCTGCGACGTGCAGCTGCTGGTGGGGCCCGAGAAGACCGTGGTACTGGCGCACCAGGCCATCCTGGCGGCCAGGTCGCAGTACCTCCGGGCTAAGATCAACTGCTGGTGGGGCCCGAGAAGACCGTGGTACTGGCGCACCAGGCCATCCTGGCGGCCAGGTCGCAGTACCTCCGGGCTAAGATCAATTCTGCGACGTGCAGCTGCTGGTGGGGCCCGAGAAGACCGTGGTACTGGCGCACCAGGCCATCCTGGCGGCCAGTTCTGCGACGTGCAGCTGCTGGTGGGGCCCGAGAAGACCGTGGTACTGGCGCACCAGGCCATCCTGGCGGCCAGGTCGCAGTACCTCCGGGCTAAGATCAACTGCTGGTGGGGCCCGAGAAGACCGTGGTACTGGCGCACCAGGCCATCCTGGCGGCCAGGTCGCAGTACCTCCGGGCTAAGATCAATCCTGAAGTCCCACCAGTTCTGCGACGTGCAGCTGCTGGTGGGGCCCGAGAAGACCGTGGTACTGGCGCACCAGGCCATCCTGGCGGCCAGGTCGCAGTACCTCCGGGCTAAGATCAAGGAAGCTCGCGAAGAACTGAACCAGCGCATAGCGGCTGGCGAGGAAGAAGCATCAGAAGTATATTCTTACAAGTCGCCGCCGCAACTGACCGTGTTACTGCCCAAAGCCACGCCGGAAGCACTCAACATGGTGCTCAACTACATCTACACGGACAGGATCGACCCTACTGAGAAAGACGAGGACCCCGCATCCCCGGCCACGGTCCTGCTGGTGATCGAGGTCCTGCGGCTGGCGCTGCGCCTGTCCATCCCGCGGCTGCGCGGGCTGTGCGCGCGCTTCCTGCGCCACAAGCTCTGCCTCGGCAACGTGCTGCAGGCGCTGCAGGCCGCGCATCATGCTAGACTGGCTTGCATCAAGGAGGACTGTCTTAGGTTCGTGGTGAAGGACTACAACTTCACGTCGATAGTGATGTCCCGCGAGTTCGAGGAGATGGAGCAGAGCCTGATAGTGGAGGTGATCCGCCGCCGCCACCAGCCGCCGCCCAAGCATCTGCCGGCGCAAGCGCAACACGACTGCGACGAGGAGATCGTTGGTTCGACCCTGGAGCAGGACCTGTGCGGGCTAATAGCGATAGGCCCTTATGATATCCCCCCCTGTCTTCTCCAGGTTCGACCCTGGAGCAGGACCTGTTCGACCCTGGAGCAGGACCTGTGCGGGCTAATAGCGATAGGCCCTTATGATATCCCCCCCCTGTCTTCTCCAGGTTCGACCCTGGAGCAGGACCTGTGCGGGCTAATAGCGATAGGCCCTTATGATATCCCCCCCTGTCTTCTCCAAGTTCGACCCTGGAGCAGGACCTGTTCGACCCTGGAGCAGGACCTGTGCGGGCTACTGGACGGGTGTGAGCTGGCGGACGTGCGGCTGCGCGTGGCGGGCGCCAGCCGCCCCGCGCACCGCTCCGTGCTGGCCGCGCGGGCCGCATACTTCGAGGCCATGTTCCGATCCTTCTCGCCGCATGATAATATCGTCAATATTCAGATTTGCGACACAGTGCCGTCGGAGGAGGCGTTCGACTCGCTACTGCGTTACATCTACTACGGCGACACCAACATGCCTACAGAGGACTCGCTCTACCTCTTCCAGGCACCTATATATTACGGCTTCACAAACAACCGCCTCCAAGTATTCTGTAAGCACAACTTACAAAGCAACGTGTCCCCCGACAACGTGCTCGCGATATTACAGGCCGCGGACCGCATGCGCGCCACTGACATCAAGGAGTACGCGCTCAAGATGATTGTACACCACTTTGGACTTGTGGCGAGACAAGAGGCGATCAAGAATTTAGCACAACCCCTCTTAGTGGATATAATATGGGCGTTAGCAGAAGAGCCGCACTTCGACTCCCCGTTGCCGCTGGCGCCGCGCAGCCTGCCCGCGTCCGCGTCGGCCGACGCCATCGCGGACGACCCGGACGCCGCGCGGTATAGGTGCGGCAAGTCTTAG
- Protein Sequence
- MTSVTLAKMISEQLRNPNDLDINLRMEFGPFETVHKWKRMSECYEFVGARRSKHTAVAYKDAIYVFGGDNGKSMLNDLIRFDIREKSWTKTGCMGVPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFTSAQWVQWRFTGQEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTINLKGESHQWEHVEQKGQCPPTCCNFPVAVAGGKMFVFSGQSGAKITNALFQFDFETHTWSRVCTEHLLRSAGGAPARRYGHVMVAHRSHLYVFGGAADNTLPNDLHCYDLDTQIWSVIQPASDSQIPSGRLFHAGAVVGDALYIFGGTVDNNVRSGELFRFQLSNYPRCTLHDDFGRILKSHQFCDVQLLVGPEKTVVLAHQAILAARSQYLRAKINCWWGPRRPWYWRTRPSWRPGRSTSGLRSILRRAAAGGAREDRGTGAPGHPGGQFCDVQLLVGPEKTVVLAHQAILAARSQYLRAKINCWWGPRRPWYWRTRPSWRPGRSTSGLRSILKSHQFCDVQLLVGPEKTVVLAHQAILAARSQYLRAKIKEAREELNQRIAAGEEEASEVYSYKSPPQLTVLLPKATPEALNMVLNYIYTDRIDPTEKDEDPASPATVLLVIEVLRLALRLSIPRLRGLCARFLRHKLCLGNVLQALQAAHHARLACIKEDCLRFVVKDYNFTSIVMSREFEEMEQSLIVEVIRRRHQPPPKHLPAQAQHDCDEEIVGSTLEQDLCGLIAIGPYDIPPCLLQVRPWSRTCSTLEQDLCGLIAIGPYDIPPLSSPGSTLEQDLCGLIAIGPYDIPPCLLQVRPWSRTCSTLEQDLCGLLDGCELADVRLRVAGASRPAHRSVLAARAAYFEAMFRSFSPHDNIVNIQICDTVPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVSPDNVLAILQAADRMRATDIKEYALKMIVHHFGLVARQEAIKNLAQPLLVDIIWALAEEPHFDSPLPLAPRSLPASASADAIADDPDAARYRCGKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -