Ccun005498.1
Basic Information
- Insect
- Chouioia cunea
- Gene Symbol
- -
- Assembly
- GCA_030064505.1
- Location
- JAOPFQ010000002.1:25256880-25260807[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-21 3.9e-19 68.7 0.9 10 105 168 262 165 266 0.91 2 4 0.046 7.2 6.7 0.1 75 109 266 300 260 301 0.86 3 4 3.7 5.9e+02 0.6 0.0 79 108 317 348 309 350 0.81 4 4 3.2e-14 5.1e-12 45.8 0.0 10 98 518 604 512 618 0.86
Sequence Information
- Coding Sequence
- ATGGATCAAGATTTCGCGGACATTCCCTTCACAATTGTCACGCAATTCGATCATCACGAAAGCGTGGGACCGGCTGGTGAAGAATTGGTGTCAGAATGGGAACATACCATGGAAGATAACcAATACATCGAAATCAAAGTCGACAATGTACTGTTGGAGCAAGAACCATTTGAAAGACTGAACTTgaaacttataatattttgcgTGAGAAACGATCAGCATCATCCATATGGCCAGGTGCTCATGAAAAGTCTGGGCGACGGCGATCGCAATAGTTATTTGGCTAAGTATTACTACAACTACCAAATAGAAATGGAGTTTTCAAACTACGTACACGAATTCAACGGTAACTATAGTTACGAGAATTCCCGCAATCTCTTTGATAAAGATGTATCGCCgttgttttacttttgtatACGCCGAATCAACAATGACTTTAAGTCGAAGTCCGATCTTGAAAAAAGACGTCGCGATGTGTTGTACACGATTATATCAGTGGGCTACTGCGATGTAGTCCTGGAAACGAAAAACGGCGTTGTCCACGCCCACAGATCCATTTTATCGCACAATAGTGAAGTTTTCAATGCCATGTTCAGTAACGAAATGGTAGAATCGCAAACTGGATTTATCAAAATGGATGAGCATGAAAAGGAGGTTGTGGTTATGATGCTAAACTACATGTACACAGGAACATTAGATGAGGATCCGGGAGATTTGACAAAAGAATTATACGCGCTCGCGCATTATTACCAATTGCATAATTTATGCAGTCTCTGTTTAGAATACTATGTTTTTCGTATTAGTTCCGACAGCGAGGTCGTTTTCGACATTTTAGAACTTGCTCAGTTTTACGATCTCCACGAGCTCGATAAGTTGGCAACGGCATTTTTAAAAACCCACCCAGACGAACTAATCAAGTTACCACGTTACCAAGACGACCTTATGAATGCTATAGGTCCAACCACTGTCTTACATACGATGAGTTTGGCTTGTCGTTTTGACATAGAACCAATTAAAAAGAGCGccttaaaatatatcaaagacAACTATTCAGCAATGATGCAAAACCCAGATTTCTTGAAGATATTTGAATCGTGTAACCCCATTTTAAGGGAATTTATCCCCAACTTGTGTTCAATGTCAACGCTTATCCGCACTCCAAAAAAACAAGGTAGATTATTGATGAAATGTAGAGGCGTCAATGAATGCTTCTTCCCGGTGTCTTATTACCGTTACGAAATTGAATTGAAGTTTTCAAACAACGCGCACGAGTTCAGCAACTGCTATAGTTATGAGATAATATGCAAAAGAACGTACGCAAATTTGCAACCGGAAGTTGGCCTCGGAAGCGACTTCGTGTTTACCTGTGTTATACGCAGATTCGAACGAGTTATCAAATCCGACGAAAGATATTTCGTCCTACATCATTCATTGATCGACACGCTGACCGATATGTACTTTTCCGTACGCAGAATCAGCTCTGAATGCTGCATCATTCAAGATGTTCAAAAAGTACGCCGCGAATCCATATTAGCCTTTAGGCTCGAGGGCCGCTTCGACGTCGATTTAGTGACCAAAAACGGTCGCCTCGGCGCCAACAGATTGACTTTATCGGAAAGCAGCGACGTTTTCAGATCTCTGTTCACCAGCAAAAAGAAGCTCGCAACAAAGGCTGCTATCCCCATGATGGATTACGAAGCAAAAGTCGTGAAAAAGATGCTTGAATTCCTGTATACAACGGATTTCGGGGATTTAGGAGACTTGTTGGAACCATTAATTCAGCTTGCGACTGACTTTCACATGTTTGACTTGGGTGACGTGAAAATGCGCATCTTTGAGTTTATAAGACAGAATTGCCGAAGCCTCatgaaaaataagtattttaaacGATTGTTTGAAGAAGGTGGGCATACACACTTcttgaaagattttttccTCCATGTGTGCAATAATTTCGAGGCTACTCGTGAGGTCGTTACAACCTAA
- Protein Sequence
- MDQDFADIPFTIVTQFDHHESVGPAGEELVSEWEHTMEDNQYIEIKVDNVLLEQEPFERLNLKLIIFCVRNDQHHPYGQVLMKSLGDGDRNSYLAKYYYNYQIEMEFSNYVHEFNGNYSYENSRNLFDKDVSPLFYFCIRRINNDFKSKSDLEKRRRDVLYTIISVGYCDVVLETKNGVVHAHRSILSHNSEVFNAMFSNEMVESQTGFIKMDEHEKEVVVMMLNYMYTGTLDEDPGDLTKELYALAHYYQLHNLCSLCLEYYVFRISSDSEVVFDILELAQFYDLHELDKLATAFLKTHPDELIKLPRYQDDLMNAIGPTTVLHTMSLACRFDIEPIKKSALKYIKDNYSAMMQNPDFLKIFESCNPILREFIPNLCSMSTLIRTPKKQGRLLMKCRGVNECFFPVSYYRYEIELKFSNNAHEFSNCYSYEIICKRTYANLQPEVGLGSDFVFTCVIRRFERVIKSDERYFVLHHSLIDTLTDMYFSVRRISSECCIIQDVQKVRRESILAFRLEGRFDVDLVTKNGRLGANRLTLSESSDVFRSLFTSKKKLATKAAIPMMDYEAKVVKKMLEFLYTTDFGDLGDLLEPLIQLATDFHMFDLGDVKMRIFEFIRQNCRSLMKNKYFKRLFEEGGHTHFLKDFFLHVCNNFEATREVVTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -