Ccun005547.1
Basic Information
- Insect
- Chouioia cunea
- Gene Symbol
- dl
- Assembly
- GCA_030064505.1
- Location
- JAOPFQ010000002.1:25928130-25932070[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.8 1.6e+04 -4.4 3.3 106 146 89 129 51 149 0.46 2 3 0.3 1e+03 -0.6 0.2 53 132 183 259 172 278 0.65 3 3 1.4e-47 4.6e-44 150.3 0.0 1 169 608 780 608 780 0.96
Sequence Information
- Coding Sequence
- ATGTATCAGCAGCAGAAGCCGGAGCACGAATTAATCCTGCCACAACACCAGTTTTTCAACCCTAATTATCAGCTGCAATGTGGAGTACAATCGCCAATTTTTCcacaaattttcaatcagACTTATCAAACGCCAATGGCGTGCCAATTTAAGAACCAGCAGCCGCAAGCTTATCAATATGCGTATCAGCAGCAGAAGCAACCACAGCAGCTACAGCTGCAAGCTCATCAATACGCGTATCAGCATCAAGAGCAGCAGCTGCAAGTTGAACAATATGCATAtcagcagcaggagcagcaaCAGCCGCAAACTCACCAATACACGTATCAGGAACAAAATCAGCAACACCAGCAACCACAAACTTATCAATTTGTATATCAGCAGCAAAATCAGCAACGACAGCAGCCACAAACTCATCAATATGTGTGTCAGCAGCCGCTGCAAGAGAGTGACTTTCCGAATCAAAATTGGTTTTTAGATGCTAACTATCCACTGCATTACGAAGGTCCAACGCAAAATATGCCTTTCGtccaaaatcaaaatcatcAAACGCAAGTCATACACCAGTTTGAAAACCAGCATCCGCAAGCTCATCAATTATTGGCTTCGAACTGTTACCAGCAGTTTCAATTTAACAACAACCCAATAACGCCATTTGACAATGAGCCAATAActcaatttaataataattcaatagctcaatataacaataatccAATGACCCTGTTTAACAATGACCAACCGCTAGTTCAATTCGAAGTCGAGGAACAACAGCAATATGCTGATCAACATTCGCCATCCAAGTACCAGAACCAGCCAATGGATGTATCTCAAACGCAAATTATAAATGGTCTTAACAAACAATTACATCAAAATTCACCTCTACTTGACATTGAAAATCAGCAGCAACCGCAACAAATTGCTCCAAATTTTCAGTCGCCAGAGCAACAacaattattagatatttgcAATCCACCACAACAACAATTATTAGATATTCGTAACCcgcaacaacagcaaccaTTAGATATTTCCAATGTCCAAGCACAgcaattattagatatttgtgatccgcagcaacagcaattattagatatttccaatccgcagcaacagcaaccacTAGATATCTCCAATGCCCAAGCACAgcaattattagatatttgcAATccacagcaacaacaattattagatatttgcGATCTGCAGCATCAGCAATTATTGGATATTTCCAAtccgcagcaacagcaaccacAAGATATTTCCAATGCCCAAGCACAgcaattattagatatttgcAATccacagcaacaacaattattagatatttgcgatccgcagcagcagcaattaTTGGATATTTCCAAtccgcagcaacagcaaccacAAGATATTTCCAATGCCCAAGCACAgcaattattagatatttgcgatccgcagcaacagcaaccacAAGATATTTCCAATGCTCAAGCACAgcaattattagatatttgtgatccgcagcaacagcaattattagatatttccaatccgcagcaacagcagccacTAGATATTTCCAATCCCCAACAACAGCAACCACTAGATATTTCCAATccacaacagcagcaaccaTTAGATATTTCCAATCCACAACAGGAGCAACCATTAGATATTTCAAATCCGCAACAACAATTATTAGATATTCCAAATCCGCAACAAGCATATATACCGATAATGGAGCAGTTCTTGCAAAACAatcagaaaaatgaaactgTTCAAACTGCACAAGAAAATCTACAAATCATGCGTCCATTGCAACAGAGTATCAAACCCTATATTGATATCCTCGTGCAGCCATCAGCCAGGGCAATACGTTTTCGTTACACCAACGAAATTAGGGCTAATGCAATTGGTATACCTGGTGTTGGTAGCAAACCTGATAATAAAACTTATCCAACAATACGCATTGTCGGTTACGAGGGCAAGGCATTCGTAGTAGTATCTTGTGTGACAAAATTAATGCCTTATCGGGTTCATCCGCACAATCTTATAGGTAACAATGGATGCAGAAAAGGAATATGTTTACTTACAacgtcgaaaaagaaagatatgaCTATCGTTTTGGACAAGCTTAGCGTACACTGCGTCAAGAGATCAGAACAGTTCAATATGCTCACCCAGCGTGAGCAAGACCGAGTGGATCCATTCAAAAgTGGTTTTCATCACAAATACAATTTGGGAGGCATCGATCAAAATTGCATACGACTTgcttttcaaacatttatcgAGGGACCAGAAAAAGGACAATACAAAATATCTTTGCCACCAGTTGTTTCTAACCCCATTTACGATAAAAaaaatgtTTCGAATCTTACAATACATAGAATGAGTCATTGCGTTGCACCAGCTTCTGGTGgtcaaaaagtaataatactTTGTGACAAAGTCAACACGGGAGACATTCAAATAAGATTTTTCGAAGAACGAAATGACGAACTTGTGTGGGAAGAATTTGTAGATATGAATAGAACTGGCAGGGTTCATAAACTATACGCTATAGTCTACGAAACTCCAAAATATATGAAACTCGATTTCAAGGGAACGGTCACTGTAAATATGGAGTTAATACGCCCCTCGGACAACTCGTGCAGTGATCCCGTACCATTTACTTTCACTCCCGTCAAAGaTACAATTGCAGGGACGAGAAAACGAGCTAGGGTCGATGAGTCACTAGAGTTATATTCTAAAATGTACGTTAAAGATGCAGCGCCTTCTCAAGTTGGTGCAAATCATCACGAATGTTCGGCTTGGGCCATAGAATTACTTAATAGTGACATGTCTTATGTTCGGACtctaacatatttttaa
- Protein Sequence
- MYQQQKPEHELILPQHQFFNPNYQLQCGVQSPIFPQIFNQTYQTPMACQFKNQQPQAYQYAYQQQKQPQQLQLQAHQYAYQHQEQQLQVEQYAYQQQEQQQPQTHQYTYQEQNQQHQQPQTYQFVYQQQNQQRQQPQTHQYVCQQPLQESDFPNQNWFLDANYPLHYEGPTQNMPFVQNQNHQTQVIHQFENQHPQAHQLLASNCYQQFQFNNNPITPFDNEPITQFNNNSIAQYNNNPMTLFNNDQPLVQFEVEEQQQYADQHSPSKYQNQPMDVSQTQIINGLNKQLHQNSPLLDIENQQQPQQIAPNFQSPEQQQLLDICNPPQQQLLDIRNPQQQQPLDISNVQAQQLLDICDPQQQQLLDISNPQQQQPLDISNAQAQQLLDICNPQQQQLLDICDLQHQQLLDISNPQQQQPQDISNAQAQQLLDICNPQQQQLLDICDPQQQQLLDISNPQQQQPQDISNAQAQQLLDICDPQQQQPQDISNAQAQQLLDICDPQQQQLLDISNPQQQQPLDISNPQQQQPLDISNPQQQQPLDISNPQQEQPLDISNPQQQLLDIPNPQQAYIPIMEQFLQNNQKNETVQTAQENLQIMRPLQQSIKPYIDILVQPSARAIRFRYTNEIRANAIGIPGVGSKPDNKTYPTIRIVGYEGKAFVVVSCVTKLMPYRVHPHNLIGNNGCRKGICLLTTSKKKDMTIVLDKLSVHCVKRSEQFNMLTQREQDRVDPFKSGFHHKYNLGGIDQNCIRLAFQTFIEGPEKGQYKISLPPVVSNPIYDKKNVSNLTIHRMSHCVAPASGGQKVIILCDKVNTGDIQIRFFEERNDELVWEEFVDMNRTGRVHKLYAIVYETPKYMKLDFKGTVTVNMELIRPSDNSCSDPVPFTFTPVKDTIAGTRKRARVDESLELYSKMYVKDAAPSQVGANHHECSAWAIELLNSDMSYVRTLTYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -