Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770262.1:150987084-150988962[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0015 0.17 13.8 2.2 1 23 14 36 14 36 0.98

2 18 7.4e-05 0.0083 17.9 1.5 3 23 109 130 108 130 0.97

3 18 6.1e-05 0.0069 18.2 0.0 1 23 136 158 136 158 0.98

4 18 5.5 6.1e+02 2.6 3.0 1 23 163 186 163 186 0.90

5 18 0.001 0.12 14.3 0.2 1 23 193 215 193 215 0.91

6 18 5.3e-05 0.006 18.4 1.4 1 23 220 243 220 243 0.95

7 18 1.4e-05 0.0015 20.2 2.3 1 23 249 271 249 271 0.97

8 18 0.0089 1 11.4 4.4 2 23 278 300 278 300 0.95

9 18 0.0029 0.33 12.9 1.8 1 23 307 329 307 329 0.95

10 18 0.038 4.3 9.4 2.2 1 23 334 357 334 357 0.96

11 18 5.3e-06 0.0006 21.5 1.5 1 23 364 386 364 386 0.96

12 18 4.9e-05 0.0055 18.5 1.1 2 23 392 414 391 414 0.96

13 18 5.2e-05 0.0058 18.4 0.4 1 23 421 443 421 443 0.98

14 18 0.0084 0.95 11.4 1.7 1 23 448 471 448 471 0.96

15 18 1.1e-05 0.0012 20.6 0.4 1 23 478 500 478 500 0.97

16 18 4.8e-06 0.00054 21.7 0.6 2 23 506 528 505 528 0.96

17 18 7.6e-06 0.00086 21.0 1.8 1 23 533 556 533 556 0.98

18 18 0.00016 0.018 16.9 2.1 1 23 561 584 561 584 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0015	0.17	13.8	2.2	1	23	14	36	14	36	0.98
2	18	7.4e-05	0.0083	17.9	1.5	3	23	109	130	108	130	0.97
3	18	6.1e-05	0.0069	18.2	0.0	1	23	136	158	136	158	0.98
4	18	5.5	6.1e+02	2.6	3.0	1	23	163	186	163	186	0.90
5	18	0.001	0.12	14.3	0.2	1	23	193	215	193	215	0.91
6	18	5.3e-05	0.006	18.4	1.4	1	23	220	243	220	243	0.95
7	18	1.4e-05	0.0015	20.2	2.3	1	23	249	271	249	271	0.97
8	18	0.0089	1	11.4	4.4	2	23	278	300	278	300	0.95
9	18	0.0029	0.33	12.9	1.8	1	23	307	329	307	329	0.95
10	18	0.038	4.3	9.4	2.2	1	23	334	357	334	357	0.96
11	18	5.3e-06	0.0006	21.5	1.5	1	23	364	386	364	386	0.96
12	18	4.9e-05	0.0055	18.5	1.1	2	23	392	414	391	414	0.96
13	18	5.2e-05	0.0058	18.4	0.4	1	23	421	443	421	443	0.98
14	18	0.0084	0.95	11.4	1.7	1	23	448	471	448	471	0.96
15	18	1.1e-05	0.0012	20.6	0.4	1	23	478	500	478	500	0.97
16	18	4.8e-06	0.00054	21.7	0.6	2	23	506	528	505	528	0.96
17	18	7.6e-06	0.00086	21.0	1.8	1	23	533	556	533	556	0.98
18	18	0.00016	0.018	16.9	2.1	1	23	561	584	561	584	0.97

Sequence Information

Coding Sequence: ATGGACCTGGATGAAATCCTTTCAAGCGACCCCGACACGTATTCGTGCGACGATTGCAACAAGCAATGCCAAAGTTATATTCAACTAATTCGCCATCGTTTGGTTCATAACGAAAATTTCGCAGGACGAGAGCGTAATATTGACGGTGACAAAATTCTAGACACCTGTCCAATCTGTTCGATTGACCTAACCGATAATTACTTTGGAACGCGACTGGCAAAGTCCGAGGAACAAATCAAATGCCACATcgattttaaagttttctacGATGAAAACTTTGATCCGCCCGAAGAGACAACAACAACGAAAACTAGCCGCCGTATATGTCCGCATTGTCGTCGCGGATTCCCACGTCGTATTCACCTGAAATGGCATATTGAGACATGGCATGCCGGCGATCAGAAATATCCTTGCGAGAATTGTGCGAAAATATTCCCCACCAAGCCGGAACTGAAAGCCCACATCGTAACACATGCTGTGCGACATTTCGATTGTGTTCACTGCAAACAGGACTTCGAGACGCTTGAACAATGTAAAATGCACTACGACATTGTGCACACGAAACGCGATAAAACTTATAGATGCGATCAATGCCCCAAGGTTTTCACGACCCGTGGCGGTCAGCAATTGCACGGCATTCTGCACACCGATCGATGTTTCGTTTGTAAGTTTTGCCGACGGAAATTTCCACGCCAAGCCGATCTAAAGCGTCACGAGTTGAGCATGCATATAAATCCGCAACTCTTTCATTGCTCGATCTGCGATAAGTCCTATTCGAGTAAGGAGTATTTGAAGATTCACGAAGAGACGCACGACGAAGCGAAATCACCGACATGTCCGCACTGCCATAAGAAGTTCTCGTCGAAGCTGGTCGCGAAGCGGCACATCGAAATGTTCCATGTCGAGGCCGAGCAACAGCATACCTGTGGGATTTGTTCGATGGTCTTTACGCGGCTTAAATATCTCGAATATCATAAAGTATCGCATTCGAATGAACGCTATTCGTGCTCTGAATGCTCCAAGGTTTTCCTACGTGAACAGAATCGCAACAGGCATTTCCAGCGAATGCATATTAACGGCGGCCAGCAGCACATCTGTAACGAATGCGATAAAGTTTTTTCGCGACCCGAATCGCTTAGCTATCACAAACGATTGCACTCCGGGCAGTATCTAACGTGTCCGGAATGCTCGAAGAAGTTCGTTCATCGACGCGACCTTGGCGCCCATATAAAACGAATGCATACAAAACAGGACGAAGAATATCCGTGCCTGATGTGTCCGAAGGTCTTCACTCGAACCCAAACATTGCGCGAGCATGAGAAGATTCATATGGCTGAAGGATTCAGTTGCTCGCAATGCACGGCACGCTTCGCAACCGGAAAGTATCTACGCAATCATATTTATCGGAAGCATACGACACAGAGTGAGACTTATGCTTGCGATAAATGCGATCGTGTCTATAAACGACTCGAATCGTTGCGCGTTCATCAGAGCGTCCATCGCGGCAATTGGGTTACGTGTAATCTCTGCCCGAAGAAATTTCCAAGACAATCGGCTCTCAACTACCACATTAAGCGGACTCATGAGCGTGGGAAATTCCAATGTGACGATTGCGGTAAGGAGTTCGATAAGAAAGTCACGCTGAAATATCATCAGCAGAAAACTCATCAGAATGTTGTCCACCGCTGTAAGCTATGTGACAATACGTATACATCGCCTAGCGGATTGTACACGCATTTGCGAAAAATCCATTTGAAGATTAGTCGACCATCGTCGCTTAAGaaagcagcagcaacaacaattgTGGACGGTGATGATGCATGA
Protein Sequence: MDLDEILSSDPDTYSCDDCNKQCQSYIQLIRHRLVHNENFAGRERNIDGDKILDTCPICSIDLTDNYFGTRLAKSEEQIKCHIDFKVFYDENFDPPEETTTTKTSRRICPHCRRGFPRRIHLKWHIETWHAGDQKYPCENCAKIFPTKPELKAHIVTHAVRHFDCVHCKQDFETLEQCKMHYDIVHTKRDKTYRCDQCPKVFTTRGGQQLHGILHTDRCFVCKFCRRKFPRQADLKRHELSMHINPQLFHCSICDKSYSSKEYLKIHEETHDEAKSPTCPHCHKKFSSKLVAKRHIEMFHVEAEQQHTCGICSMVFTRLKYLEYHKVSHSNERYSCSECSKVFLREQNRNRHFQRMHINGGQQHICNECDKVFSRPESLSYHKRLHSGQYLTCPECSKKFVHRRDLGAHIKRMHTKQDEEYPCLMCPKVFTRTQTLREHEKIHMAEGFSCSQCTARFATGKYLRNHIYRKHTTQSETYACDKCDRVYKRLESLRVHQSVHRGNWVTCNLCPKKFPRQSALNYHIKRTHERGKFQCDDCGKEFDKKVTLKYHQQKTHQNVVHRCKLCDNTYTSPSGLYTHLRKIHLKISRPSSLKKAAATTIVDGDDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00203762;
90% Identity: -
80% Identity: -