Cnem010199.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- KDM5A
- Assembly
- GCA_949316135.1
- Location
- OX438607.1:2663790-2666769[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-09 4e-06 27.5 0.0 42 89 182 226 175 226 0.88
Sequence Information
- Coding Sequence
- ATGGAAGAGAACATAGCTGAATACAGGCCCCGATTATGTTGGGGGAAGGAGCACGGTCACAACAATGTGgcccataaaaaaaaaaaaagcctgATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGCACCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCACGGCCATCGCCCCCGCACAAGGCCGCCGCCGTCGCCGTCACCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTTGCGCATCGTCAACGCGCCTGTCTTCTATCCCACCGCCGACGAGCTTCCTACCGCTGCTGCCACTTCGACTCTTCTCCGAAAGGTTTCAAACCCGCTTGCACTCTCGACGGCATGGACAGGTTCAACGTCATGAACCAATACATAGTGAGGCTATACAACAGGTGGGGGCCGGCGGCGAGGGAGATGTGTGCCACGAAGGCCCATCTATCGTCACAGAGCGTTATTTTCTCGAAGGCACCATTGcagcaaggtggtctcaagagagtgatagagaagaagcgatggggtcgcattgcagaagaaatgcgctgcaccaaactgtccaacccggaaaagaaatttgatcagatatatgtcaaatatttgcTGCCTTACGACACAATGCCTAgccGGGAGCGCCAGCAGTTGCTTTGGAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAACACGGGAGATTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTACTGGAAGATGGTGATGCTTGGCACTGAACACATCTGCGTCAACTCGGCGTCCATTGACACCGGGGAACAGGGGTACGGCTTCACTACGAACGAAGCAGACTCCATGTCCAAACACCCCTGGAACCAAAAGgtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccatggttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctagcagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgcTGTGCCCGTCGTTCtgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcactctgtgtaggatcgagcagaatccaggcgaGTCATATTAA
- Protein Sequence
- MEENIAEYRPRLCWGKEHGHNNVAHKKKKSLMARSLATESILSMVDCEHLLDTLSLNQRLPRPSPPHKAAAVAVTAVSATDRPHADAGHVRVQRLRRRGLAHRQRACLLSHRRRASYRCCHFDSSPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCATKAHLSSQSVIFSKAPLQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMPSRERQQLLWKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEHGRFMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNQKVMSKNKANMLRFMGPMVGVTVPTLHLGMLFSSSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVTLCRIEQNPGESY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323270; iTF_00323271;
- 90% Identity
- iTF_00323274;
- 80% Identity
- -