Cnem010211.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- KDM5A
- Assembly
- GCA_949316135.1
- Location
- OX438607.1:2741084-2753225[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-15 3.3e-12 47.0 0.0 25 89 252 313 221 313 0.81
Sequence Information
- Coding Sequence
- ATGTATCGTGGAGCTGCAAACTATGATAGAAAAGAGATAGTAGAAGCTCTAATAAACGCAGAAGCAAATGTTAATGCACAAGATAGAAATGGAAAAATTCCTTTAGATAGCGCAGCTAGCACAGAAGAGATAAAAACTCTATTACTAAAACCCCCCAAAAAAATTGATGACAGTATAGCATCAAAAGATAATGAAGTAGGTCAAGAGGAAGATGCTGGACAAGAAGGTATGGAAGAGAACATAGCTGAATACAGGCCCCGATTATGTTGGGGGAAGGAGCACGGTCACAACAATGTAgcccataaaaaaaaaaaaagcctgATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGCACCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCCGCCGCCGTCGCCGTCACCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACgatccgatagcttatttcgagaagattatggtgaaagctgatcagttcgcaatttgcaaaattgtagCTCCGAAAGGTTTCAAACCCGCTTGCACTCTCGACGGCATGGACAGGTTCAACGTCATGAACCAATACATAGTGAGGCTATACAACAGGTGGGGGCCGGCGGCGAGGGAGATGTGTGCCACGAAGGCCCATCTATCGTCACAGAGCGTTATTTTCTCGAAGGCACCATTGGTGAGCAactttctgattaaaagtCTGCAACGACTGGAACTCAACCTGCCAAAGCTGTTTAACTTGGTGCAGCAGCAAGGTGGTCTCAAGAGAGTGATAGAGAAGAAGCGATGGGGTCGCATTGCAGAAGAAATGCGCTGCACCAAACTGTCCAACCCGGAAAAGAAATTTGATcagatatatgtcaaatatttgcTGCCTTACGACACAATGCCTAgccGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAACACGGGAGATTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTACTGGAAGATGGTGATGCTTGGCACTGAACACATCTGCGTCAACTCGGCGTCCATTGACACCGGGGAACAGGGGTACGGCTTCACTACGAACGAAGCAGACTCCATGTCCAAACACCCCTGGAACCAAAAGgtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctagcagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgcTGTGCCCGTCGTTCtgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcactctgtgtaggatcgagcagaatccaggcgaGTCATATTAA
- Protein Sequence
- MYRGAANYDRKEIVEALINAEANVNAQDRNGKIPLDSAASTEEIKTLLLKPPKKIDDSIASKDNEVGQEEDAGQEGMEENIAEYRPRLCWGKEHGHNNVAHKKKKSLMARSLATESILSMVDCEHLLDTLSLNQRLPRPSPPHKAAAVAVTAVSATDRPHADAGHDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCATKAHLSSQSVIFSKAPLVSNFLIKSLQRLELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMPSRERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEHGRFMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNQKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSSSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVTLCRIEQNPGESY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323278;
- 90% Identity
- iTF_00323274;
- 80% Identity
- iTF_00323270;