Cnem000431.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- KDM5A
- Assembly
- GCA_949316135.1
- Location
- OX438595.1:4622349-4637877[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-18 4.5e-15 56.2 0.0 6 89 750 830 746 830 0.89
Sequence Information
- Coding Sequence
- ATGACTTCTGATGAAAAAACCAATATAAAGTGTATTAAGGGCAAAATAGACGTGAACAAGGCTAGTGGTCCAGATGGAATCCCTGCAGTGGTGCTGCGCAACTGTGCTCCTGAGTTGTCTCCCATCCTAACACGCCTGTATCGCCTCTCACTTGAGACTGGAGTTAACGTGCAGCCTGTGCCCAAAAAAGGAAGCCGTGACGACCCATCTAATTATAGACCCATTTCAGTCACTTCTGTACTCTGTAAGACTATGGAACGTGTACTGAATAATCGTCTCCTTTGCTACCTTGAAGACAATGATCTCCTAAGTGACCGTCAGTTTAGCCGTGGTCGGTCTACTGGGGATCTTCTTGTGTACGCCACCCACCTTTGGAGCGAGGCTATAGAGAGATACGGTGAAGCCATCGCAGTTTCACTTGACGTCTCCAAGGCCTTTGATCGGGTTTGGCATGtgCATATGCAAAAGAAGATGGACAGTCCAAGACGTTGTCAAAAACAGACATGGGCACAGCGTAAATTCGCTCAAGGATACCAGCCACCCGTTGGGACTGGCAGCCACAACAACACAACAACCACCAGAGATGAACAAACCCTACTCGATATAAGACCCCCCAAAACCGTCAAACATGCCATGAGTGCAATAGAATTATTGGACTTAGTGtcttttaaaaATCTTCACCAACATTATGTACAACCAGTAGTGGTGCTGGAACGTATGAAGTCGAAAGCCGACGCAATAGAACCACATCGAAAAAAAGTTCATAgagataaagatattaaaaagcaCAACACAAGAAGTGTCACAAATGTTCAACATTTCAGCAGTGAAGATGAGGCACCTCTGACATATTTCAAATCtctacctaaaaaaaaatctatagttGCTCAAGAAGttttagcTCCTCTTGTAACTACGGCTTCGCCGGAGGAATCATGCCCTTTAGCTGTGACTAACGCTACTAAGATACTTGGAAAATTGGATAACCCGATATATAAAGAAATGAAGAAAACCAAAGCCGTTGAATCTATTGGTGCTGAACACGCATTTAAACAACCAGCATGTagcattaataataaagaaatggaTAATTCTAAAGCTAAAGATTCTAAAAATTCTAGTGAATCGATTTCGATCCCGGTAACGACGGTTACAACTAATCTAATTGATTCTCAAGTTAACGAACAACCACAAGCAGATCGTGCATATTCTCTTTCTACCTACGACAAGTCACAGAAGACCCCATCGAAATCCATCTATGCCAACATGGACAATATAGAGAAATGGTTAGACGATGTTCTTAACGATAAAGAGCTCTCTGAAGTTGTCGCTTTAATAGAAGATAAAGATGATGATCCCAAGGTGTGTCCATCTGTGGAGTTCACAACAGTGCAGCAAGTGATCGCGGCACCGCAACAGGATCTAGAACGGCGCTGTAGAACATGTTCACCCTGTCGGCGCGTGGACAAAGTAAAATCCATCATCAATTTAGTGAGGTCTTGCAGCGAAACCTCTTCCGACGTGTACAGCTTCGACGACGTAGAGGAGGGCCTGAACAAGCAGCGCTTCAAAAGTCGGCGTGCGCCACTTACCGATCCCGAGTGCAACACAATATATCTAGACCTACTGCCCAAGAACAGCCCGCACCTAGTGAGAATCACTCTGGTGAGCGCCCCGAACCGGCCGAAGCAGATCATGCGGGCCAGCCTGATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGCACCTGCTGGACCAGCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCGGTGCAAGTGCCGCGGCCGCCAACGCCGCCGCGAGCCCGCAGCCCGGCGCAGTCGCCGCCACCGTCGCCGTCGCCGCCGTCGccgtcgccgccgccgccgccgccgtcgCCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTCGCGCATCGTCAACGCGCCTGTGTTCTATCCGACCGCCGACGAGTTCAAGgatccgatagcttatttcgagaagattatggtgaaagctgatcagttcgcaatttgcaaaattgtagctccgaaaggtttcaaacccgcttgcactctcgacggcatggacaggttcaacgtcatgaaccaatacatagtgaggctatacaacaggtgggggccggcggcgagggagatgtgtgccatcaaggcacatctatcctcacagagcgttattttctcgaaggcaccattggtggaaggcatggaactcaacctgccaaagctgtttaacttggtgcagcagcaaggtggtctcaagagagtgatagagaagaagcgatggggtcgcattgcagaagaaatgcgctgcaccaaactgtccaacccggaaaagaaatttgatcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTACTGGAAGATGGTGATGCTTGGCACTGAACACATCTGCGTCAACTCGGCGTCCATTGACACCGGGGAACAGGGGTACGGCTTCACTACGAACGAACCAGACTCCATGTCCAAACACCCCTGGAACCTAAAGgtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctaccagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgctgtgcccgtcattctgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaaccttctggttgagcatggagtcactctgtgtaggctcgagcagaatccaggcgaattcattttagttttgcCGAAAGCCTATTCCTGCTCTATAAGCACCGGTTATAATGAGTCGGAAAGTGTGTACTTTGCTACTGGTGGCTGGTTCGACAACATCGGTGATGTGTTTGGTGAACTTAAGGCGACATGTGAACCGACCATGTTCGCTCTTGAGCATCTACTGCTAGGAGCGGCCAATGCAAAGGATTTAGAGAAAGCAAGACGGAAACGGGCCGCCGCATGGCTGCAGCAACTGCTAACTCTTGAGATTACTTCACGGAGGGCGCTGGTGTCGGCTGGAGTGACAGTAGTGCCGTCACCATCGATTCAATTGACGGAACAAACCGCGTGGAATGTTCGTCTCGTATCTGAATGTGAGATATGTAGGTCTACGCTGTATCTATCAGTAGTCAAAGGACTTCCTTCATCCACAGGCACCACTTGTCCCACGCACGCTCTCCATCTACTGAACCTTCCAAAACATAAGGAAAATATACCCCTTCTCGAGCTGCACCTCAAAGTGTCAGATGAAGATCTCAACACAATGTTATCTGATGCGCAAGCAATTCTTTCTATTGCGTAA
- Protein Sequence
- MTSDEKTNIKCIKGKIDVNKASGPDGIPAVVLRNCAPELSPILTRLYRLSLETGVNVQPVPKKGSRDDPSNYRPISVTSVLCKTMERVLNNRLLCYLEDNDLLSDRQFSRGRSTGDLLVYATHLWSEAIERYGEAIAVSLDVSKAFDRVWHVHMQKKMDSPRRCQKQTWAQRKFAQGYQPPVGTGSHNNTTTTRDEQTLLDIRPPKTVKHAMSAIELLDLVSFKNLHQHYVQPVVVLERMKSKADAIEPHRKKVHRDKDIKKHNTRSVTNVQHFSSEDEAPLTYFKSLPKKKSIVAQEVLAPLVTTASPEESCPLAVTNATKILGKLDNPIYKEMKKTKAVESIGAEHAFKQPACSINNKEMDNSKAKDSKNSSESISIPVTTVTTNLIDSQVNEQPQADRAYSLSTYDKSQKTPSKSIYANMDNIEKWLDDVLNDKELSEVVALIEDKDDDPKVCPSVEFTTVQQVIAAPQQDLERRCRTCSPCRRVDKVKSIINLVRSCSETSSDVYSFDDVEEGLNKQRFKSRRAPLTDPECNTIYLDLLPKNSPHLVRITLVSAPNRPKQIMRASLMARSLATESILSMVDCEHLLDQLLDTLSLNQRLPRPSPPHKAVQVPRPPTPPRARSPAQSPPPSPSPPSPSPPPPPPSPPSPPPIDRTQTPATSESNGFDAEGSRIVNAPVFYPTADEFKDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCAIKAHLSSQSVIFSKAPLVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMSSRERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEPDSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVTLCRLEQNPGEFILVLPKAYSCSISTGYNESESVYFATGGWFDNIGDVFGELKATCEPTMFALEHLLLGAANAKDLEKARRKRAAAWLQQLLTLEITSRRALVSAGVTVVPSPSIQLTEQTAWNVRLVSECEICRSTLYLSVVKGLPSSTGTTCPTHALHLLNLPKHKENIPLLELHLKVSDEDLNTMLSDAQAILSIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323259;
- 90% Identity
- -
- 80% Identity
- -