Cnem000340.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- Kdm5a
- Assembly
- GCA_949316135.1
- Location
- OX438595.1:3891103-3899987[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-18 3.6e-15 56.5 0.0 6 89 532 612 528 612 0.89
Sequence Information
- Coding Sequence
- ATGGACAGTCCAAGACGTGGTCAAAAGCAGACATGGGCGCAGCGTAAATTCGCTCAAGGATACCAGCCACCCTTTGGGACTGTCAGCAACAACAACACAACAACCACCAGAGATGAACAAGCCCTACTCGACATAAGACCCACCAAAACCATGAAACATGACATGAGTGCTATGGAATTATTGGATTTAGTGtcttttaaaaATCTTCACCAACATTGTTTACAACCAGTAGTGGTACTGGAACGAATGAGGTCTAATGCAGACACAATAGAACCACATCGAAAAAAAGTTCATAGAGATAAGGATATTAAAAAGCACAACACAAGAAGTGTCACAAATGTTCAACATTTCAGCAGTGAAGATGAGGCACCTCTGACATATTTCAAATCTCTACCTAAAAAAGAATCTATAGTTGCTCAAGAAGCTCCTATCACTCCAGCTTTGCAAGAGAAATCGCGGCCTTTAGCTGTGGCTGACGCTACTACGTTAcccgaaaaaaataagaatactgaAGCTATTGAATCTACTGATAATGAGATGGTCGAGCAAGAACCAGCAAATTCATTTGCAATCACTACTGCTGACAATTCTGATATAAccgtttttacaaatataaacaatatagAGAAATGGTCAGACGATGTTATTATAGATAAAGAACTCCCTGAAGATGTCGATTTAATAGAAGATAAAGGTGTCGGTACCAAGGTGTGTCCATCTGTGGAGTTCACAACAGTGCAGCAAGTGATCGCGGCACCGCAACAGGATCTAGAACGGCGCTGTAGAACATGTTCACCCTGTCGGCGCGTGGACAAAGTAAAATCCATCATCAATTTAGTGAGGTCTTGCAGCGAAACCTCTTCCGACGTGTACAGCTTCGACGACGTAGAGGAGGGCCTGAACAAGCAGCGCTTCAAAAGTCGGCGTGCGCCACTTACCGATCCCGAGTGCAACACAATATATCTAGACCTACTGCCCAAGAACAGCCCGCACCTAGTGAGAATCACTCTGGTGAGCGCCCCGAACCGGCCGAAGCAGATCATGCGGGCCAGCCTGATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGCACCTGCTGGACCAGCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCGGTGCAAGTGCCGCGGCCGCCAACGCCGCCGCGAGCCCGCAGCCCGGCGCAGTCGCCGCCACCGTCGCCGTCGCCGCCGTCGccgtcgccgccgccgccgccgccgtcgCCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTCGCGCATCGTCAACGCGCCTGTGTTCTATCCGACCGCCGACGAGTTCAAGgatccgatagcttatttcgagaagattatggtgaaagctgatcagttcgcaatttgcaaaattgtagCTCCGAAAGGTTTCAAACCCGCTTGCACTCTCGATGGCATGGACAGGTTCAACGTCATGAACCAATACATAGTGAGGCTATACAACAGGTGGGGGCCGGCGGCGAGGGAGATGTGTGCCATCAAGGCACATCTATCCTCACAGAGCGTTATTTTCTCGAAGGCACCATTGGTGGAAGGCATGGAACTCAACCTGCCAAAGCTGTTTAACTTGGTGCAGCAGCAAGGTGGTCTCAAAAGAGTGATAGAGAAGAAGCGATGGGGTCGCATTGCAGAAGAAATGCGCTGCACCAAACTGTCCAACCCGGAAAAGAAATTTGATcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAACGCCAACAGATACTTTGCAAGGTAGAAAAGGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGCGCTGTCAGTCCGCTGCACCGACAGAAGAAGATATTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCGGAGGAGGAGGACGAGGACGACGCGAGGGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTACTGGAAGATGGTGATGCTTGGCACTGAACACATCTGCGTCAATACGGCGTCCATCGACACCGGGGAGCAGGGGTACGGCTTCACTACGAACGAAGCAGACTCCATGTCCAAACACCCCTGGAACCTAAAGgtaatgagtaagaacaaggccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggtatgctgttctctaccagctgctggcaccgagacccgcacagcctgccctgggtcgagtacatgcacaacggacccagcaagatatggtatggaatccctGACGCTAAaagtcaggcattcagaaaagcagtagaaacacTGTGCCCATCTTTCtgtctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcactctgtgtaggctcgagcagaatccaggcgaattcatattagttttgcCGAAAGCCTATTCCTGCTCTATAAGCACCGGTTATAATGAGTCGGAAAGTGTGTACTTTGCTACTGGTGGCTGGTTCGACAACATCGGTGATGTGTTTGGTGAACTTAAGGCGACATGTGAACCGACCATGTTCGCTCTTGAGCATCTACTGCTAGGAGCGGCCAATGCAAAGGATTTAGAGAAAGCAAGACGGAAACGGGCCGCCGCATGGCTGCAGCAACTGCTAACTCTTGAGATTACTTCACGGAGGGCGCTGGTGTCGGCTGGAGTGACAGTAGTGCCGTCACCATCGATTCAATTGACGGAACAGACCGCGTGGAACGTCCGTCACGAATCTGAATGTGAGATATGTAGGTCTACGCTGTATCTATCAGTAGTCAAAGGACTTCCTTCATCCACAGGCACCACTTGTCCCACGCACGCTCTCCATCTACTGAACCTTCcaaaacatcgaaaaaatgTATCTCAAATCGTGCTGTACTTTAAAGTATCAGATGAAGAtctcaacaaaatgttatgtgaCGTGCAAGCCATTCTTTCCATTGCTTAg
- Protein Sequence
- MDSPRRGQKQTWAQRKFAQGYQPPFGTVSNNNTTTTRDEQALLDIRPTKTMKHDMSAMELLDLVSFKNLHQHCLQPVVVLERMRSNADTIEPHRKKVHRDKDIKKHNTRSVTNVQHFSSEDEAPLTYFKSLPKKESIVAQEAPITPALQEKSRPLAVADATTLPEKNKNTEAIESTDNEMVEQEPANSFAITTADNSDITVFTNINNIEKWSDDVIIDKELPEDVDLIEDKGVGTKVCPSVEFTTVQQVIAAPQQDLERRCRTCSPCRRVDKVKSIINLVRSCSETSSDVYSFDDVEEGLNKQRFKSRRAPLTDPECNTIYLDLLPKNSPHLVRITLVSAPNRPKQIMRASLMARSLATESILSMVDCEHLLDQLLDTLSLNQRLPRPSPPHKAVQVPRPPTPPRARSPAQSPPPSPSPPSPSPPPPPPSPPSPPPIDRTQTPATSESNGFDAEGSRIVNAPVFYPTADEFKDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCAIKAHLSSQSVIFSKAPLVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMSSRERQQILCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEDDARVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNTASIDTGEQGYGFTTNEADSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHSLPWVEYMHNGPSKIWYGIPDAKSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVTLCRLEQNPGEFILVLPKAYSCSISTGYNESESVYFATGGWFDNIGDVFGELKATCEPTMFALEHLLLGAANAKDLEKARRKRAAAWLQQLLTLEITSRRALVSAGVTVVPSPSIQLTEQTAWNVRHESECEICRSTLYLSVVKGLPSSTGTTCPTHALHLLNLPKHRKNVSQIVLYFKVSDEDLNKMLCDVQAILSIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323260;
- 90% Identity
- -
- 80% Identity
- -