Cnem016270.2
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- Arid2
- Assembly
- GCA_949316135.1
- Location
- OX438616.1:2750355-2773182[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-20 4.4e-17 62.6 0.0 2 89 17 102 16 102 0.93
Sequence Information
- Coding Sequence
- ATGGCGAAATCTCAAATAAATACCAAATCAAGTCAATACATAAACAACAAGGATACATTCCTAAAGGATCTGAAGCAGTTTAATGaaagtaaaaatgtCCCATTCAAAACGCCGATATCGGTAAATGGAATTGAAATAGATTTATACTTATTCTACACATTGGTACAACAAAAAGGAGGATTGAGCAAGgTAAATCAAACAGACGCTTGGGATTCATTGATGAGACCTCTCCATCTACCGCATCCATGTATTAATGGTTCAactttactgaaaaaattgTACTGCACTTATTTGGAAAAGTATGAGAGAGCCAAGGGTCCACCAGGCAGGGATGATGATATGGACTTGGATGAGGATCCCAGGAGGAGCAGGGGTGGAGGTTTCCCCAGGGTGCCTTATGGCAGTGGGACTTATGTGTCAGCATCGGGTGAAACTCTAGTTCGTACATCGATGCCAAAGATTGCAGGCCCATCAGAGAAACTATCGCTGTCTCTTTTGTCTCCTCTGCCAAATGAGCAGGACTTTGCTATAAATGTCTGCACCGTACTAGCGGCGGATCATTCTAATAGACTTCCTTTGTCTACTACACCTCATATATTGGACTTCTTATTGGCTCATGCTGGTGTTTACAATCATGCGAACCTCCGCGACACGATCGGCCGTTCATACTTCGAATCCCGAGGTCGTTACCCTGACGAGTTTTGGAAGCTTCGATCAGGGGGAGGTGGGGCTAAGGAACTAGCTGATGAGAGCAAATTCCAGCTCCCAGGAGTTGAACAGCCAGAGCTCATGGTCCAGGCTTTAGCAGCTCATAATACTCTCACGGATTGCTTGATGAACAAAGGAGAGGTGGAAGATGAAACGGATAAGGTTGTTGAAGAGGATGTTCTAGAAGATTGGGTGACGGAGATATCAGAGGAGGACCAGCTCTTCGCTCCAGAGCTGCCAGGCGGTGCGAGCTGTGTTTACACTCAGCGCGTGTTACAGATAGCTTCGATAGTGCGCTCGCTGTCTTTCTATGAAGAGAACGTGCAGTTTCTGTCCAAGAACACCACACTCATAAGATTCCTTCTGTTGTGTTGCAACTGTTGGGTTGGATCATTGCGTCAATCGGGTCTCGATACACTCGGGAATATAGCTTCGGAACTGATCATTAAGGACCCAGCGACATGTTTGATATCGCGACACATTCTGTCGATTATTCAGTCCGCTCTGATTTCATCTGACCGTGCGAGAGTGCTCGCTGCGCTAGAATTGCTGAACAAACTCGCGCAAAACGATATCAACGAGGACGCACTGCTTAAATCGCTTGAATCCAGGgtGTACTCGGACATTTGCGCGCTGCTGACCCTGCGTGACATCATGGTGCTAGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGTAACGCGGATACGTAATGGTGCTGTGTGCACGCTGGAGTGCATGTACGCGGTGACGTCACTGGGCGAGGCGGCCAGCGAGGGCGTGGCGCGCGTGCGCGGGCTCGTGCACACGCTCGTGGCGCTCGTCACTGTCGAGGCACAAAGTTACGGCCCTCGTGCTTGCATTCTGATGCGTGTCGTGGAAACTGTCAGCGGACCGACTGCCCTTGCAGTGCAGCAGGAGAGGGACAATCAACAACAGCAACAGCAGGTCACGCAGTCCCCAGTGAAACCGCAATTAGTTCAAGTACAGGAGTCACCACAAGCGCCATCTACCCCGCAACAGGCAACAACTTCAATGTCCAATCTACAGCAATCTCATATGCAGCAGAGGGCAGCACAGGAAAACGAGCACTTCGCTCTCGGCTGGCTGCGCTCTATGTACGAGCCGCTGCCGGCGCACGACCACAGCGCGTGCGACGCGGCGGACGTGTACCGCCTGTACCGCGCGCTCTGCAACAAGCGCAGCAGGAAGCCGCTGCCGCCCGAGCACATGTGTCGCCTCGTCAGGTCAGTGCACGTGCATAACGACTGTACTGTATGGTTAGAACGAGCACTTCGCTCTCGGCTGGCTGCGCTCTATGTACGAGCCGCTGCCGGCGCACGACCACAGCGCGTGCGACGCGGCGGACGTGTACCGCCTGTACCGCGCGCTCTGCAACAAGCGCAGCAGGAAGCCGCTGCCGCCCGAGCACATGTGTCGCCTCGTCAGAACGAGCACTTCGCTCTCGGCTGGCTGCGCTCTATGTACGAGCCGCTGCCGGCGCACGACCACAGCGCGTGCGACGCGGCGGACGTGTACCGCCTGTACCGCGCGCTCTGCAACAAGCGCAGCAGGAAGCCGCTGCCGCCCGAGCACATGTGTCGCCTCGTCAGAACCGTATTCGGTGGGACGGTTGGCCCAAACAAGGTGACTCTTTCCACGGGAGAGACCCAGCAAGTTTACGTCGGGATCAGAGCGAAGAACCCACAGAATAGAACATCTTCCGTAGCAGGTCCATCATCGCCGATATTGAAAGCGCAATTAACAAACAAGACGGCCAATGTTGAAGTGAAACAAGTAGTTCCACAAGTACAAGCGCAGCCTCAACACCCGCATTTATCTCAAGCTCTGGAGTCGAATCAGTCGAATACATCACTAATAAAACACTTATTAGCACATAAAGTAAGCCCCGCCCTACAACAAACGCAAgTAGCTCAAAGGCAACAAAACCAACAGCGATCAACACCGGCTACCACAGTTGTTGTACAACAAAATGCTTCCGGTTCGATGGAGGTGGATCCGGAAGCTTTGATAAAGTGTACAACTATCACTCCAGGTGGTATTGCCAGCAGTATGCCGAATAATGAAaagttgaTGGTCACAGGGACTGATGATGCTATAGcacCTAAAGATGATCCGGACCAAATTCAAATAGACGATCAGGCTCAAATAACTATTaaatccGCACAAAACAAAATGCTAGCAGATCTGCTAGAAAAGAAGTCCAACCCACCGGTACAGGTGGTACAAATGTCACCACAAATCAATGCACCCACAATACAAATCACGGAAACAGGTCAAATAGTTCAGGTCAAAGCTGACCCCAATCCTGTCATACAGATCAATGACAGTGGTATCATGTCCCAAGGAGGTCAATACTTCCAGATCAAAAACGAACAAGGTCAActaatacaaataaagaacGATCAAGGCCATATAATACAGCTAAAAGGAGATCAATTGCAAGGAcctttaatacaaattaatacaaagaACGATCAAGGTCAGATTATGCAAGGGGGACCGATTATGCATGGAGGTCAAATTATACAGCAGGGAAGTCAGATAATACAGGGAGGCCAGATAATACAACAAGGCGGGCAAATAATACAGCAAGGGGGTCAATTAATACAACAAGGGGGTCAAATAATACAAGGGGGtcaaataatacaacaaaGTGGGCAAATAGTACAAGGAGGTCAAATCGTTCAAGGGGGACAGATAGTACAAGGGGGTCAAATAGTACAGGGTGGTCAAATAGTACAACAAGGTCAAATCGTACAAGGAGGGCAGATTATGCAAAGTGTAATCCAAGGTCAAATGATCCAAGGCCAGGTCAAAGAGAAGGAGCAAATGGTTGAAAGTGTAAACACCGATCATTCTTATACGGAACCACCGGCTAAGAAAGTGAAGGTCGAGGAAAAAAGAGAGaacAATTCGCCGCAAGAGAGCGTTTCCAAGACCGCCGCAAACTTGTACGCGGCGCTAGCTGCATCAGCATTGGAAGATGAAGAAGACTTGATGCCACCAAAGCAAGAACCAGTGGATGTACAACAGCCTGTTATAGTTTCAGGCAACACTGAAAATTCTTCTGTCATCATTCAGGAACCTATATTAcaggtGCAGCAACCCACTATGCAGGTTCAGCAACCTACATTACAAGTCCAACAACAACCCACTTTACAGaTGCAACAACCCATGCAACACGTGCAACAAGTGCAACAGCCGATGCTGCAAGTGCAGCCGATGGATGTACAGAACATCATCGCATCTCAATCTGGGCAGATCATTATACaagAGAAGCCAATAGTGTCACAACAGACTCAGTTTGTTCAACAGCCGATGCAAATTATTGCTACACAAGGAACTTCACAGCCTGGTCTAAGTTACATAACACAGAATATTCCTGGTAATATGATGCAGAAGACTATAATAATAGTTCAGGGTCCTACAGGGGGTGGACCCCTGACTCTTACGGTGAACAACCCATCTGGTTTGGATGAGGCGACGTTAAACAACCTTATTGCCCAAGCAACAGAGGCGATAGCGCAACAGCAAATAATTCAGAATTCAGGAGTGATACAAAACGCACAAAGAGTGATAGTGAGTCAGCCGACACTTGTTAACACGTCACAGCCTATCACTATGGTCAAAACCGCACTGTCACAGaatCCTCCGCAACTTACTCCAAGCCAGCAACCAATAATAACATCGCAACCGCAACCGCACAAGGCCATTGTGAATCAACAGCCGCAACAGATAGTGGTCACGCAAAAACAACCGCCCGCTTTGATAAGCACCACCGGGAATAACCAGGTGATTCAAGGTAACCAAACTTTAATGCAAGGTAATCAGCAGATAATAGCCGTGTCGAACAACCAACAGATAATAATGAACACGCCAATGAAGCCCGTACATAGAGTTGTGCAAAATCAAAGGCCTCAGACGGAAAACAAAACGAGCGTCATACAAACTAGTACATCTGGCCAGCCGTTGATGCGTCAGGTGATCACCCGCCAACCTGTTATGGTGGGGAGTACTAAAATAGGGGAGAAGGAAGTCGTCGTCTCACAGCCTATAGTGCCAgagAAACCTACAACTCCTGCCCCTAAGCCGGCGTCAACCCCTCCGCCTGCTTCAACCCCTGCAGCCGAAGAAACACCCTGGATCTGCCATTGGAGAGGATGCGGCAAGTAA
- Protein Sequence
- MAKSQINTKSSQYINNKDTFLKDLKQFNESKNVPFKTPISVNGIEIDLYLFYTLVQQKGGLSKVNQTDAWDSLMRPLHLPHPCINGSTLLKKLYCTYLEKYERAKGPPGRDDDMDLDEDPRRSRGGGFPRVPYGSGTYVSASGETLVRTSMPKIAGPSEKLSLSLLSPLPNEQDFAINVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHANLRDTIGRSYFESRGRYPDEFWKLRSGGGGAKELADESKFQLPGVEQPELMVQALAAHNTLTDCLMNKGEVEDETDKVVEEDVLEDWVTEISEEDQLFAPELPGGASCVYTQRVLQIASIVRSLSFYEENVQFLSKNTTLIRFLLLCCNCWVGSLRQSGLDTLGNIASELIIKDPATCLISRHILSIIQSALISSDRARVLAALELLNKLAQNDINEDALLKSLESRVYSDICALLTLRDIMVLVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEVTRIRNGAVCTLECMYAVTSLGEAASEGVARVRGLVHTLVALVTVEAQSYGPRACILMRVVETVSGPTALAVQQERDNQQQQQQVTQSPVKPQLVQVQESPQAPSTPQQATTSMSNLQQSHMQQRAAQENEHFALGWLRSMYEPLPAHDHSACDAADVYRLYRALCNKRSRKPLPPEHMCRLVRSVHVHNDCTVWLERALRSRLAALYVRAAAGARPQRVRRGGRVPPVPRALQQAQQEAAAARAHVSPRQNEHFALGWLRSMYEPLPAHDHSACDAADVYRLYRALCNKRSRKPLPPEHMCRLVRTVFGGTVGPNKVTLSTGETQQVYVGIRAKNPQNRTSSVAGPSSPILKAQLTNKTANVEVKQVVPQVQAQPQHPHLSQALESNQSNTSLIKHLLAHKVSPALQQTQVAQRQQNQQRSTPATTVVVQQNASGSMEVDPEALIKCTTITPGGIASSMPNNEKLMVTGTDDAIAPKDDPDQIQIDDQAQITIKSAQNKMLADLLEKKSNPPVQVVQMSPQINAPTIQITETGQIVQVKADPNPVIQINDSGIMSQGGQYFQIKNEQGQLIQIKNDQGHIIQLKGDQLQGPLIQINTKNDQGQIMQGGPIMHGGQIIQQGSQIIQGGQIIQQGGQIIQQGGQLIQQGGQIIQGGQIIQQSGQIVQGGQIVQGGQIVQGGQIVQGGQIVQQGQIVQGGQIMQSVIQGQMIQGQVKEKEQMVESVNTDHSYTEPPAKKVKVEEKRENNSPQESVSKTAANLYAALAASALEDEEDLMPPKQEPVDVQQPVIVSGNTENSSVIIQEPILQVQQPTMQVQQPTLQVQQQPTLQMQQPMQHVQQVQQPMLQVQPMDVQNIIASQSGQIIIQEKPIVSQQTQFVQQPMQIIATQGTSQPGLSYITQNIPGNMMQKTIIIVQGPTGGGPLTLTVNNPSGLDEATLNNLIAQATEAIAQQQIIQNSGVIQNAQRVIVSQPTLVNTSQPITMVKTALSQNPPQLTPSQQPIITSQPQPHKAIVNQQPQQIVVTQKQPPALISTTGNNQVIQGNQTLMQGNQQIIAVSNNQQIIMNTPMKPVHRVVQNQRPQTENKTSVIQTSTSGQPLMRQVITRQPVMVGSTKIGEKEVVVSQPIVPEKPTTPAPKPASTPPPASTPAAEETPWICHWRGCGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323207;
- 90% Identity
- iTF_00323207;
- 80% Identity
- iTF_00323207;