Cfor023599.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chloromyia formosa
Gene Symbol
Hr39
Assembly
GCA_964017055.1
Location
OZ024816.1:8619478-8635477[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.13 2.8e+03 -1.4 0.9 55 96 240 285 193 365 0.58
2 4 9.6e-10 2e-05 25.4 0.0 1 28 437 464 437 483 0.85
3 4 0.0072 1.5e+02 2.7 0.2 90 147 493 553 475 573 0.60
4 4 4e-77 8.5e-73 247.3 0.4 203 408 575 773 565 773 0.97

Sequence Information

Coding Sequence
ATGAGTGTCATAAATTCCAATGCACCTGCGCTCTCATCAAATCGTAGCAACAACGTTTCAGTGACCAATATCAAATGTGAGCAGGGAGCTTTGATCCCGGCAAATATTAAGCGTGAACCGTTGGAAATCGATCAGCATCAAAACGGCATACACCACACACCCACTACGCCCAATTGTAATAGTTACATGAACGGAAACGGCTGTATGCCAGGAAGCGGCGGTAGCAACATCAGTAGCAGTAGTTGTAGCAGCACAAGTGGCGGTGCCGTGAGAATTCAAGTTCCCAAAGTCGAAGATTCCGACGAATCGGAATCGGAGTTGGCCAACATTGAGCATTCGTCGAATGTCAATAGGCGGGCAGGAAGTGCAAATAAGAATGGTCCACGACCAATGTCGTGGGAGGGAGAGCTTTCGGAGCCGGAAGACGGAATGATGGACACCGAGAACTCGGTGAGCATTGATAAAGACTACGACGACTCACAAATGTCCACAACGAAAGATGATTCGCGACAGAGTGGTATTATGAAAGCCGATTATGAGCAAACGCCAGTGGACCCAGGCGGTCCTGTGGGTTTTAGTTCGGCGGCGAAAAAATTCCAATCCGACTGTATAAGTCTGAAATATGAGCCAGGTCTTTCGGACGCTACGGCCAGTGGTTTGAACTCGCCGCTGTTGGCTCGCTCCAAATCGAATTTACTACCGGCCAATCCCAGTCCTGATTCTGCCATTCATTCCGTTTATACGCATAGTTCGCCCAGCCAATCGCCACTCACGTCCCGTCATGCACCCTACACACCGTCATTGAGTCGCAATAATAGTGATGCATCGCATAGTAGTTGTTATTCGTACAGTTCAGAGTTCAGTCCCACCCATTCGCCAATCCAAGGACGTCACAACATTTACGGCAATTTCAATGGATCTCTGCACCATTCCGTATTGTACAGGCCCATCGTAGACGGCCAGGATTCTGCCTTGCATTCACTGAATACCGGCACGGCTCCGGGTGCGACGCCTCGGCGTCCAGATGAGATTTTATCCACTGCAGAAAATGATGCCATTCCATCGCCGGGAATCTCAAGGCAACAACTTATCAATAGTCCTTGCCCGATTTGTGGCGATAAGATCTCTGGATTCCATTATGGTATATTCTCGTGTGAATCCTGCAAGGGTTTCTTCAAGCGAACGGTGCAGAATAGAAAGAATTATGTGTGTGTACGAGGCGGTCCGTGTCCAGTGACGATTTCCACACGAAAAAAATGTCCAGCCTGTCGATTCGAGAAGTGTTTGCAGAAGGGCATGAAACTGGAAGCGATTCGAGAGGATCGAACACGCGGCGGACGATCAACGTATCAGTGTTCGTATACATTGCCCAACTCAATGCTGAGTCCGATGGTGAATAATGGGCAGGACGGCAGCGGCTCGATTCGAGCAAATATGATGAATGGTTGTGTAGTTAAGACCGAACACTCGGAACTAAGTAATGGTAGTGTTAATTTATCGGCCAGTAGTTATCGTAATAATAATGTCCCAACTTTACTACAGGAAATCATGGATGTTGAACATCTGTGGCAGTACAACGAAGGCGAAATAGCCCGATTCAGTCAATGCGCTGTTATGTCGGCAGCAAATTCGGCCGCATCACCAACAACGGCTGCAGCCGCGGCCGCTTCTCTAGCATCGAATCCATTATTAGGTAGTGCCGGCTTAACGTCATTAAATGGCGAGAATGCCAACCCCGATCTAATAGCGAATTTGTGCAATGTGGCCGATCATCGACTGTATAAGATTGTCAAGTGGTGTAAAAGTTTGCCACTCTTCAAAAACATTTCGATCGATGATCAAATTTGTTTGCTGATCAATTCATGGTGTGAACTGTTATTGTTCTCGTGTTGTTTTCGATCGATGTCGACACCTGGCGAAATTAAAATATCGCATGGAAAGTCTATAACACTCGCACAGGCAAAGTCCAGTGGCCTGCAGGCATGCATTGAAAGAATGCTTAATCTGACAGATCATTTAAGACGATTGCGAGTCGATCAGTATGAATATGTTGCCATGAAAGTTATAGTGCTATTGCAGTCTGATACATCAGAATTGCGAGATCCAGTGAAAGTGCGTGAGAGTCAAGAGAAAGCGTTGCAAGCTCTACAGTCGTACACATTAGCACATTATCCAGAAACACCGGCCAAATTCGGGGAACTATTACTAAGAATTCCGGAATTACAGAAAACATGTCAGCTCGGCAAAGAAACACTCACCATCAAGTCAAAGGAGGGCGAAGATTTCAATCTTCTCATGGAATTGTTGCGCGGAGAACATTGA
Protein Sequence
MSVINSNAPALSSNRSNNVSVTNIKCEQGALIPANIKREPLEIDQHQNGIHHTPTTPNCNSYMNGNGCMPGSGGSNISSSSCSSTSGGAVRIQVPKVEDSDESESELANIEHSSNVNRRAGSANKNGPRPMSWEGELSEPEDGMMDTENSVSIDKDYDDSQMSTTKDDSRQSGIMKADYEQTPVDPGGPVGFSSAAKKFQSDCISLKYEPGLSDATASGLNSPLLARSKSNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIYGNFNGSLHHSVLYRPIVDGQDSALHSLNTGTAPGATPRRPDEILSTAENDAIPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPMVNNGQDGSGSIRANMMNGCVVKTEHSELSNGSVNLSASSYRNNNVPTLLQEIMDVEHLWQYNEGEIARFSQCAVMSAANSAASPTTAAAAAASLASNPLLGSAGLTSLNGENANPDLIANLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIKISHGKSITLAQAKSSGLQACIERMLNLTDHLRRLRVDQYEYVAMKVIVLLQSDTSELRDPVKVRESQEKALQALQSYTLAHYPETPAKFGELLLRIPELQKTCQLGKETLTIKSKEGEDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00793554;
90% Identity
iTF_00322625;
80% Identity
iTF_00322625;